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PREDICTED: Stomoxys calcitrans trimeric intracellular cation


LOCUS       XM_013260270            1507 bp    mRNA    linear   INV 02-SEP-2023
            channel type 1B.1 (LOC106093243), transcript variant X2, mRNA.
ACCESSION   XM_013260270
VERSION     XM_013260270.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013260270.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1507
                     /gene="LOC106093243"
                     /note="trimeric intracellular cation channel type 1B.1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 10 Proteins"
                     /db_xref="GeneID:106093243"
     CDS             308..1138
                     /gene="LOC106093243"
                     /codon_start=1
                     /product="trimeric intracellular cation channel type 1B.1"
                     /protein_id="XP_013115724.1"
                     /db_xref="GeneID:106093243"
                     /translation="MDPEAFLDMANQVIKLKMFPYFDIAHSLLAALAVREDLGANAQA
                     FSRKHPLACWLSTMLVIFSGAMVANGLLGEPILSPLKNTPQLLVGTAVWYLVFYTPFD
                     IGYKIGKFLPVKVVASAMKEIYRAKKVYDGVTHAAKLYPNAWIIMIIIGTLKGNGAGF
                     TKLLERLIRGAWTPTAMEFMQPSFYTKASLLASIIFVLDKKTDWISAPHALVYFGIVI
                     FLVYFKLSSILLGIHDPFLPFENLSCAIFFGGIWDSLAKILGRGQAKDGEGKDAKKGN
                     "
     misc_feature    431..985
                     /gene="LOC106093243"
                     /note="TRIC channel; Region: TRIC; pfam05197"
                     /db_xref="CDD:461583"
     polyA_site      1507
                     /gene="LOC106093243"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tatatttaac atttatttta tttctacttt gctgcgggca atttgttttc tgtgttgtgg
       61 attttgctct cgtggtcgga cgtgtttgcg tttttcgttc tcgttcgttg ccaaaaaaat
      121 ataaaaaatt aaattttcat ttttaaacac cgttttagag ctgctgcgct gcggttggct
      181 aaaaaagttt tgaaaccccc attcaaaata caaaaaattt tgtgttgctt tgtcttcttc
      241 agttgcgaag tcacatactc attggaacta aacgaagcag aaaagctctt acacaacaaa
      301 ataaatcatg gatcccgagg catttttaga tatggccaac caggtcatca aactgaagat
      361 gttcccctac ttcgatatag cccacagttt attggccgcc cttgcagtac gcgaagattt
      421 aggtgcaaat gctcaagcat tttcccgcaa acatcccttg gcctgttggt tgtccacaat
      481 gttggttatt ttctctggcg ccatggtagc taatggtttg ttgggggaac ccatattgtc
      541 gcccttgaag aatacacccc aacttttggt gggcacagct gtttggtact tagtcttcta
      601 cactccattc gatattggct ataaaattgg caaatttcta cctgttaaag ttgtagccag
      661 tgctatgaag gaaatctaca gagccaagaa agtctacgat ggtgttacac atgctgccaa
      721 attgtatccc aacgcctgga ttataatgat tatcattggt acactaaagg gcaatggtgc
      781 tggcttcaca aaattgttgg aacgtttgat tcgcggtgcc tggacaccaa cagccatgga
      841 atttatgcaa ccatcattct acaccaaagc atctttgttg gcctccatca tctttgtgct
      901 ggacaagaaa acggattgga tttcagctcc ccatgctctc gtctatttcg gcattgtcat
      961 atttttggtc tactttaaat tgtcgtccat actgttgggc attcatgatc ccttcttgcc
     1021 cttcgaaaat ctcagctgtg ccatcttttt cggaggaatc tgggatagtt tggcaaagat
     1081 tttgggtcgt ggccaagcca aagatggcga aggcaaagat gccaaaaagg gcaattaaaa
     1141 gacttttccc cattatactt agatgtatgg cttaagtgcc tataaagcta atggaatgaa
     1201 tgaatggtta caaaaaaaaa aaaaaacgaa aaacgacgca acgatgccta atcggaaaat
     1261 ggaaaatcaa aaataatttt tggaaaacta acgaaaacga aatgcaacac aaagagacct
     1321 aagcaataca taaatacatt agtttttttt tatttttaaa tttttataaa tcatttctag
     1381 tcatcaggtt aatttcagtt accaaaaaat aagtcgctct tattattttt ccagcacgcc
     1441 atgtgggtgt tcgtgccgtt aaataatgac cgtggcttgt aagactttgt tgttatttaa
     1501 gattttt