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PREDICTED: Stomoxys calcitrans trimeric intracellular cation


LOCUS       XM_013260268            1481 bp    mRNA    linear   INV 02-SEP-2023
            channel type 1B.1 (LOC106093243), transcript variant X1, mRNA.
ACCESSION   XM_013260268
VERSION     XM_013260268.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013260268.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1481
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1481
                     /gene="LOC106093243"
                     /note="trimeric intracellular cation channel type 1B.1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 10 Proteins"
                     /db_xref="GeneID:106093243"
     CDS             282..1112
                     /gene="LOC106093243"
                     /codon_start=1
                     /product="trimeric intracellular cation channel type 1B.1"
                     /protein_id="XP_013115722.1"
                     /db_xref="GeneID:106093243"
                     /translation="MDPEAFLDMANQVIKLKMFPYFDIAHSLLAALAVREDLGANAQA
                     FSRKHPLACWLSTMLVIFSGAMVANGLLGEPILSPLKNTPQLLVGTAVWYLVFYTPFD
                     IGYKIGKFLPVKVVASAMKEIYRAKKVYDGVTHAAKLYPNAWIIMIIIGTLKGNGAGF
                     TKLLERLIRGAWTPTAMEFMQPSFYTKASLLASIIFVLDKKTDWISAPHALVYFGIVI
                     FLVYFKLSSILLGIHDPFLPFENLSCAIFFGGIWDSLAKILGRGQAKDGEGKDAKKGN
                     "
     misc_feature    405..959
                     /gene="LOC106093243"
                     /note="TRIC channel; Region: TRIC; pfam05197"
                     /db_xref="CDD:461583"
     polyA_site      1481
                     /gene="LOC106093243"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tatatttaac atttatttta tttctacttt gctgcgggca atttgttttc tgtgttgtgg
       61 attttgctct cgtggtcgga cgtgtttgcg tttttcgttc tcgttcgttg ccaaaaaaat
      121 ataaaaaatt aaattttcat ttttaaacac cgttttagag ctgctgcgct gcggttggct
      181 aaaaaagttt tgaaaccccc attcaaaata caaaaattgc gaagtcacat actcattgga
      241 actaaacgaa gcagaaaagc tcttacacaa caaaataaat catggatccc gaggcatttt
      301 tagatatggc caaccaggtc atcaaactga agatgttccc ctacttcgat atagcccaca
      361 gtttattggc cgcccttgca gtacgcgaag atttaggtgc aaatgctcaa gcattttccc
      421 gcaaacatcc cttggcctgt tggttgtcca caatgttggt tattttctct ggcgccatgg
      481 tagctaatgg tttgttgggg gaacccatat tgtcgccctt gaagaataca ccccaacttt
      541 tggtgggcac agctgtttgg tacttagtct tctacactcc attcgatatt ggctataaaa
      601 ttggcaaatt tctacctgtt aaagttgtag ccagtgctat gaaggaaatc tacagagcca
      661 agaaagtcta cgatggtgtt acacatgctg ccaaattgta tcccaacgcc tggattataa
      721 tgattatcat tggtacacta aagggcaatg gtgctggctt cacaaaattg ttggaacgtt
      781 tgattcgcgg tgcctggaca ccaacagcca tggaatttat gcaaccatca ttctacacca
      841 aagcatcttt gttggcctcc atcatctttg tgctggacaa gaaaacggat tggatttcag
      901 ctccccatgc tctcgtctat ttcggcattg tcatattttt ggtctacttt aaattgtcgt
      961 ccatactgtt gggcattcat gatcccttct tgcccttcga aaatctcagc tgtgccatct
     1021 ttttcggagg aatctgggat agtttggcaa agattttggg tcgtggccaa gccaaagatg
     1081 gcgaaggcaa agatgccaaa aagggcaatt aaaagacttt tccccattat acttagatgt
     1141 atggcttaag tgcctataaa gctaatggaa tgaatgaatg gttacaaaaa aaaaaaaaaa
     1201 cgaaaaacga cgcaacgatg cctaatcgga aaatggaaaa tcaaaaataa tttttggaaa
     1261 actaacgaaa acgaaatgca acacaaagag acctaagcaa tacataaata cattagtttt
     1321 tttttatttt taaattttta taaatcattt ctagtcatca ggttaatttc agttaccaaa
     1381 aaataagtcg ctcttattat ttttccagca cgccatgtgg gtgttcgtgc cgttaaataa
     1441 tgaccgtggc ttgtaagact ttgttgttat ttaagatttt t