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PREDICTED: Stomoxys calcitrans zinc finger FYVE domain-containing


LOCUS       XM_013260193            2749 bp    mRNA    linear   INV 02-SEP-2023
            protein 1 (LOC106093176), transcript variant X1, mRNA.
ACCESSION   XM_013260193
VERSION     XM_013260193.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013260193.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2749
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..2749
                     /gene="LOC106093176"
                     /note="zinc finger FYVE domain-containing protein 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 3 Proteins"
                     /db_xref="GeneID:106093176"
     CDS             314..2485
                     /gene="LOC106093176"
                     /codon_start=1
                     /product="zinc finger FYVE domain-containing protein 1
                     isoform X1"
                     /protein_id="XP_013115647.2"
                     /db_xref="GeneID:106093176"
                     /translation="MFKIDKKIPGSAIMEPCDSLTFNKEEARPDVVCDADFRSIPFTS
                     TDYEVLDSSTDRSFLLMDGNEHLHIETAEKFCNKLKCSDTAKIKVVSIFGNTGDGKSH
                     TMNHTFFRGEEVFKTSAEQNSCTLGVYAAMQKDMGVLCLDTEGLLSTSKKSNRRMRML
                     LKILAISDIVIYRTRSERLHSDMYDFLGTASKAFCLHFSQALQSIQGSANLGPAVIIF
                     HETRHTKPLENSVEESAGDKLRDYFSRLNYDIDAFSSLRYVGIQTSSNSTTDYKKLIA
                     ALRVDLENTTVRSPRQPSVIYKAMRSLNKKFSCEIVEKSINPFPEQYFTCPILCVSCN
                     RRCQHSMGHESQNHSNANPCLLQYQFDNKVELCKSCYKNGREVAVTRTDGWTHSVINC
                     PHCGEIAKAFKYWGTAQDCDAIQTQAVHVWKDGNILTKGPTHSGQMVLDRVGYVCEAF
                     SNFSSQPTGVLKEWCADKVAPKYWKPNHEIINCFSCKKNFEKTGLRKHHCRGCGEGFC
                     DLCTKHRMSVPSRKWFEHVRVCSDCHQKLLKQPDAIPAQEEQIIDQTTNYYSNHHTHT
                     GPNNAGPEETDVTVRKCGETIYNTISNVASVALECTKDIIKDTARPDYWVPDSKALHC
                     NLCEMQFGTAEELVSAGTLNEIPFKGGDNKRHHCRRCGQGVCSECSKSRRPVPERGWL
                     EDVRVCDACVNDDIAIRTNGADHDTKFKPTTSVDDPKAKVE"
     polyA_site      2749
                     /gene="LOC106093176"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tactatttgt tacatttgat tgaggtgaaa tgctcgcgat aatgtaaaca aattgttata
       61 acaaaaagac attgagactc ttgtgcaaaa ccactttaaa gaggtgatca ctcgccgttt
      121 ggtttgcgtg tgtgggcgca gaacaagaaa aacaagacca cgacaaaaaa aaatcccccc
      181 gctaagaaac gtaattccta gcagagtgta tggtgaaaga ggtggtggac gacaagttat
      241 tgggcaataa ttgacaaaag aagaacaaaa atatagtcaa aacccattta aaatacaaag
      301 aagaagtgac agcatgttca aaatcgataa aaagatacca ggttctgcaa ttatggagcc
      361 gtgtgattcc ttgaccttca acaaggagga ggcccgtccc gatgttgtct gcgatgctga
      421 ctttagatcc ataccattca cctccactga ctatgaggtt ttggatagtt caacagatcg
      481 ctcctttctg cttatggacg gcaatgaaca tttgcacata gaaacagcgg agaagttctg
      541 caataaactg aaatgttcag atactgccaa aattaaagtt gtttccattt tcggtaacac
      601 cggcgatggc aaatcacaca ccatgaacca taccttcttt aggggagaag aagtgtttaa
      661 aacatcagca gaacaaaact catgcacctt aggcgtatac gcggccatgc aaaaggacat
      721 gggcgttttg tgtctagaca ccgaaggcct attgtcgacc tcgaaaaaga gtaatcgacg
      781 catgcgtatg ttacttaaga ttctagccat ttcggatatt gtgatatatc gcacacgttc
      841 ggaaagattg cacagtgata tgtatgattt cttgggcacg gcttcgaaag ccttttgcct
      901 gcacttctcc caggctttgc agtcaattca gggttctgcc aatttgggcc cagctgtgat
      961 aatattccat gagaccaggc atacaaagcc tttggagaat tctgtcgaag aaagtgccgg
     1021 agacaagctt agagattatt tttcgcgcct aaattatgac attgatgctt ttagttcact
     1081 gcgctatgtg ggcatacaga cctcgtcgaa cagtacaact gactataaaa aacttattgc
     1141 agctttacgg gtggatttag aaaataccac agtacgttca cccagacagc caagtgttat
     1201 ctacaaggcc atgcgatcat tgaataagaa attctcctgc gaaatcgttg aaaaatccat
     1261 aaatcctttc cccgagcagt attttacttg tcccattcta tgtgtctcat gcaatcgccg
     1321 ttgtcaacat tccatgggtc acgaaagtca gaaccattca aatgcgaacc cctgcttatt
     1381 gcaataccag ttcgataata aagtggagct ttgcaagtct tgctataaga acggtcgtga
     1441 agtggccgta acccgcactg acggatggac tcatagcgtg atcaattgtc cacattgcgg
     1501 cgaaatcgca aaggctttta agtattgggg cactgcccaa gattgtgatg ctatacaaac
     1561 acaggccgtg catgtttgga aggatggcaa cattttaacg aaagggccca cccactcggg
     1621 acaaatggtc ttggatagag tgggttatgt gtgtgaagcc ttttcaaatt tctcatcaca
     1681 gccgactggt gtattaaagg agtggtgtgc tgataaagtc gctccaaagt actggaaacc
     1741 caaccacgag ataattaact gtttttcctg caagaagaac tttgaaaaga ctggcttacg
     1801 caagcatcac tgccgtggct gtggcgaagg tttttgtgat ctttgtacaa aacatagaat
     1861 gtcagtaccc agtcgcaaat ggtttgagca tgtacgtgtt tgcagtgatt gccatcaaaa
     1921 acttttaaag cagccggacg caataccagc tcaagaagaa caaattattg atcaaactac
     1981 taactactac tctaatcatc atacacacac aggacctaat aacgctgggc ccgaagagac
     2041 cgatgttaca gtgcgcaaat gtggcgagac catttacaat acaattagca atgtggcttc
     2101 ggtggctctg gagtgtacca aagacattat caaagatacc gcaaggcccg actattgggt
     2161 accagattcc aaagccttac actgcaattt gtgcgaaatg cagtttggta cagcagaaga
     2221 gttagtttct gctggcacac ttaacgaaat accatttaaa ggtggcgata acaaacgcca
     2281 tcactgtcgt cgatgcggcc agggcgtttg ctcggagtgt tcaaaaagtc gaagaccagt
     2341 accggaacgc ggctggctag aggatgtccg cgtttgtgat gcctgtgtta acgatgatat
     2401 tgctataaga acaaatggcg ccgaccatga tacgaaattc aagcccacta ctagtgtcga
     2461 tgatcccaaa gccaaagttg aataagtttt gttttatttt tcacgcccag catcaacacc
     2521 aacaccatgg ccctccatat tctgctttgc tgtcgaagga cgttaaaaaa agttacctgc
     2581 cctggagaaa ctttgtctct ttattgtttt cgttttctat gaattcaacg tcttcttgtg
     2641 ataaatgacc ctgattatat gttaataatc taatacataa ctaatacata tgtaaaaaaa
     2701 aggttggtaa aaactcttgt tacaaataaa aaattttact ttaaacaca