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LOCUS XM_013260113 3748 bp mRNA linear INV 02-SEP-2023 ACCESSION XM_013260113 VERSION XM_013260113.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013260113.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3748 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3748 /gene="LOC106093119" /note="vinculin; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:106093119" CDS 250..3129 /gene="LOC106093119" /codon_start=1 /product="vinculin" /protein_id="XP_013115567.1" /db_xref="GeneID:106093119" /translation="MPVFHTKTIESILDPVAQQVSRLVILHEEAEDGNAMPDLSRPVQ VVSAAVTNLVKVGRDTINSSDDNILRQDMPSALNRVETASQLLEEASDMLRADPYSGP ARKKLIEGSRGILQGTSSLLLCFDESEVRKIIQECKRVLDYLAVAEVINTMEDLVQFL KDLSPCLSKVSREVSAREKELTHQVHSEILVRCLEQVKILAPILICSMKVYIHIVEQQ GKGVEEAAENRNYLASRMSDEIQEIIRVLQLTTYDEDTSELDNLTVLKKLNNAINTKA ELANDWLNNPYALRGGVGEKALRQIIENANEISERCLPQDSYPIRRTADEISAMANSL CELRQDGKGTSPQAESLARSIREKLGDLQSQIQHAVIGVNKAGVQQTAHTIQGRLEQA VKWLQHPEINDGGLGERAVNLIVEEGRKVAEGCPGHQKAEIMQLCDEVERLKRQAAGN TPAAKEAAKKLTHKLHELKAAVQNALVNRIVQDFMDVSTPLKQFTEAVMLPEGTQGRE QNFNQKSNNLQAFSDRASKTSRMVAAGGACGNKKIAEILLSSASQVDSLTPQLVNAGR IRMNYPASKAADEHLQNLKQQYADTVLRMRTVCDQATDPADFIKTSEEHMQMYAKLCE DAIHAKQPQKMVDNTSNIARLINRVLLVAKQEADNSEDPHYTAKLNAAANRLESSLPA MVGDAKRVATNINDPAAAHAWKGSFQRLLGDVRDVRNAIAPPAPPLPNVPPPPIPEFS AMHLSNQNAERAPPRPPLPREGLAPQRPPPPETDDEDEGVFRTMPHANQPILIAARGL HQEVRQWSSKDNEIIAAAKRMAILMARLSDLVQSDSRGSKRELIATAKQIAEASEEVT RLAKELARQCTDRRIRTNLLQVCERIPTIGTQLKILSTVKATMLGAQGSDEDREATEM LVGNAQNLMQSVKETVRAAEGASIKIRSDHTNRLQWVRRQPWYQY" misc_feature 256..3123 /gene="LOC106093119" /note="Vinculin family; Region: Vinculin; pfam01044" /db_xref="CDD:460040" polyA_site 3748 /gene="LOC106093119" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgttatgggc aaaagccaaa atgttcattt actcatttag ttggcaaaga attctcgggc 61 gagtaatttt tgtttcggtt ttttgtgttt acttggaaat ctgcagatta acttaagccc 121 caccccaacc caacaataaa agtaaagtaa aacaaacaaa aattgtactg tgagctaaac 181 cgaaccgaaa tttgaagaaa aaaactttat tataacataa attaaggttg tgttcctgct 241 ccaaggaaaa tgccggtgtt tcatacgaaa actatagaaa gcattttaga tcctgtagca 301 caacaggtat cacgcttggt catccttcat gaagaagccg aagatggcaa tgccatgccc 361 gatcttagcc gacccgtaca agtggtctcg gctgccgtca ctaatctcgt gaaagtcggc 421 cgtgacacca ttaacagttc cgatgataac atactccgcc aagatatgcc ctcagcattg 481 aatcgcgttg agactgcctc gcagttgctg gaagaagctt ccgatatgtt gcgggccgat 541 ccatattcgg gaccggcgcg caaaaaacta attgagggaa gccgcggtat actgcaaggc 601 acctcttcgc tattgctctg ctttgatgaa tcggaagtac gtaaaatcat acaggaatgt 661 aagcgggtgc tggactatct ggccgtggcc gaggttataa ataccatgga ggatttggtg 721 cagttcctta aggatctttc gccttgtctg agcaaagttt cgcgtgaggt tagcgcccgt 781 gaaaaggagc tgacccatca ggtgcacagt gaaattttgg tgcgttgttt ggaacaggtg 841 aaaattctgg cccccatact aatttgcagc atgaaagtct acatccacat agtcgagcaa 901 cagggtaagg gtgtagagga ggctgcagaa aatcgcaact atttagcctc acgcatgagt 961 gatgaaattc aggaaatcat acgcgttctc cagttgacca cctatgatga agacaccagt 1021 gagctggata atttgacggt gcttaagaag ctgaataatg ccatcaatac caaggctgag 1081 ttggccaatg attggttaaa taatccctac gcattacgcg gtggagttgg tgagaaggcc 1141 ttgcgtcaaa tcatagaaaa tgccaatgaa atctcagagc gttgcttgcc gcaagattca 1201 tatcccatta gacgcaccgc tgatgaaatc tcagccatgg ccaatagttt gtgtgaattg 1261 cgtcaggatg gcaaaggtac ctctccgcaa gccgaatctc tggctcgtag catacgtgag 1321 aaacttggcg atttgcaatc ccaaattcag catgccgtta ttggtgtgaa caaagctggc 1381 gtgcagcaaa ctgcacatac catacaggga cgtttagaac aagctgtcaa atggctgcaa 1441 catcccgaaa tcaatgatgg tggtttggga gaacgtgccg taaacttgat tgtcgaggag 1501 ggtagaaaag tcgccgaggg ctgccctggc caccagaaag ccgagatcat gcagttgtgt 1561 gatgaagtgg aacgtttgaa acgccaagca gctggtaata cccccgcggc aaaagaagcc 1621 gccaagaaac taacccataa actgcatgaa ctaaaggctg cagtgcaaaa tgctcttgtc 1681 aatcgcatag tgcaagattt catggatgtc agcaccccat tgaaacaatt caccgaagcc 1741 gttatgttgc ccgaaggcac ccaagggcgt gagcagaatt tcaatcagaa atctaataac 1801 ttgcaagctt tttcggatcg tgcctccaag acctcccgca tggttgctgc cggtggtgct 1861 tgtggtaata agaaaattgc cgaaatttta ctttcctccg cctcccaagt ggactctttg 1921 acccctcagt tggtgaatgc gggacgcatt cgtatgaact atcccgccag caaggcagca 1981 gatgagcact tgcaaaatct gaagcaacaa tatgccgata ctgttttgcg catgcgcacc 2041 gtttgtgatc aagccactga tccggctgat ttcattaaga cctccgagga acatatgcaa 2101 atgtatgcga aactttgtga ggatgccatt catgccaaac agccacaaaa aatggttgat 2161 aatacatcga atattgctcg ccttatcaat cgtgtactac tggtggccaa acaggaggct 2221 gataactctg aagatcctca ctacacagct aaattaaatg ctgctgctaa tcgtttggag 2281 agttcactgc cagccatggt tggtgatgcc aagagggtgg caaccaacat aaatgatcca 2341 gcagctgcac atgcatggaa gggttcattc caaagacttt tgggtgatgt gagagatgtt 2401 cgcaatgcta ttgctccacc agcaccacca ttgcctaacg tcccaccacc accaattcca 2461 gaatttagtg ctatgcactt gtcaaatcaa aatgccgaac gtgccccacc aaggccacca 2521 ttgcctagag aaggattggc tcctcaacga ccaccaccac cagaaaccga tgatgaagac 2581 gaaggtgtct tccgcaccat gccacatgca aatcaaccta ttttgattgc cgcccgcggt 2641 cttcaccaag aagttcgtca atggtcctcc aaagacaatg aaattattgc tgctgccaaa 2701 cgcatggcca tactgatggc tcgcctctcc gatttggtgc aatcggattc acgtggcagc 2761 aaacgtgaat tgattgccac tgccaaacaa attgccgaag cttccgagga ggttacccga 2821 ttggctaagg aattggctcg ccaatgtacc gatcgccgta tacgtaccaa tttgttgcaa 2881 gtttgcgaac gtatacccac tattggtaca caattgaaga tactctccac tgtcaaggct 2941 actatgttgg gtgctcaagg atcagatgaa gatcgtgagg ccaccgagat gttggtgggc 3001 aatgcacaaa atctgatgca aagtgtcaag gaaactgtgc gtgctgccga aggtgccagt 3061 atcaaaatac gctcggatca cactaatcgc ttgcaatggg tgcgtcgcca accttggtat 3121 caatactaag acgatgctac aaaggaattt gtatattttt tacaatattt tttttttaat 3181 tttttactta aaacaaacaa aacctctaac ataagtgcct taaacgttaa caatgatatt 3241 tattatatat ttgtgctcgc tccttattgt gtgtgtgtct tcaaagttgt ttggaatatt 3301 tttctataat ttttttataa tttttttgtc ctaatgttaa gattatacaa cgaaacctaa 3361 accacttgat gtaaatccca aataataaaa cctaaacttt ggcagttctt tttttaataa 3421 tgcaatacca agtattcaag tgcaatataa tgaattgttt tcacctcatc agctaaggta 3481 atgcatttaa tttgaaaatc ccttaaagat taagaatgtc cctttataat catctacaat 3541 acaaacaaat tgttgccaaa ttttatggct ttagtttttt ctttgattag ataaattttt 3601 attatttttt ggcagataga agaaaatcac aactaatgat aatttgtatt actaacaaaa 3661 caaaatcctt ttgaattgga attcaagttg cattcgagca tttaaagtgt gtctagaaga 3721 agcaaataaa taaaaataca aaaaacaa