PREDICTED: Stomoxys calcitrans splicing factor 3B subunit 4

LOCUS       XM_013260047            1137 bp    mRNA    linear   INV 02-SEP-2023
            (LOC106093067), mRNA.
ACCESSION   XM_013260047
VERSION     XM_013260047.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013260047.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1137
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1137
                     /gene="LOC106093067"
                     /note="splicing factor 3B subunit 4; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:106093067"
     CDS             97..1083
                     /gene="LOC106093067"
                     /codon_start=1
                     /product="splicing factor 3B subunit 4"
                     /protein_id="XP_013115501.1"
                     /db_xref="GeneID:106093067"
                     /translation="MAAGPIAERNQDATIYVGGLDDKVSETLLWELFVQGGPVVNVHM
                     PKDRVTQMHQGYGFVEFLSEDDADYAIKIMNMIKLYGKPIRVNKASAHQKNLDVGANI
                     FIGNLDTEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAFINFASFEASDAAMD
                     AMNGQYLCNRPISVSYAFKRDSKGERHGSAAERLLAAQNPSSHADRPHQLFADAPVPN
                     MIPVMSGQIIPPPLMAPPPPPSGSSSMLPPPPPVPPPQASFVPPPPLPPIGSQGIPPP
                     VGIPPPPRMIPPGAWPTGAQAPPPNWRPPANFPPAPFPPAQFNGDASVSYQY"
     misc_feature    139..360
                     /gene="LOC106093067"
                     /note="RNA recognition motif 1 (RRM1) found in splicing
                     factor 3B subunit 4 (SF3B4) and similar proteins; Region:
                     RRM1_SF3B4; cd12334"
                     /db_xref="CDD:409771"
     misc_feature    391..639
                     /gene="LOC106093067"
                     /note="RNA recognition motif 2 (RRM2) found in splicing
                     factor 3B subunit 4 (SF3B4) and similar proteins; Region:
                     RRM2_SF3B4; cd12335"
                     /db_xref="CDD:409772"
     polyA_site      1137
                     /gene="LOC106093067"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aatcgatagc ggcaatttcg ctagattgtg caggagagta tagggctaat atcaatttgg
       61 ctcctttatt tactgaattt aatgtaagcg catattatgg ctgctggacc aattgcagag
      121 aggaaccaag atgccacaat atacgttggt gggcttgacg acaaagtgtc agaaacattg
      181 ctctgggaac tttttgtgca aggcggtcct gttgtgaacg tacacatgcc aaaggatcgc
      241 gtgacacaaa tgcatcaggg atatggattt gttgagttcc ttagcgaaga tgatgccgac
      301 tacgccatca agataatgaa catgatcaaa ctttatggaa aacctataag ggttaataaa
      361 gcatctgccc atcagaagaa cttggatgtc ggagcgaata tatttattgg caatcttgac
      421 acggaagtcg atgaaaaact tctctacgat actttttccg cgttcggtgt tatattacaa
      481 acaccaaaaa ttatgcgaga tcccgaaact ggtaactcaa agggctttgc gtttataaat
      541 tttgcaagtt ttgaagcatc cgatgctgca atggacgcaa tgaatggaca gtatctctgt
      601 aataggccaa tttctgtatc gtatgcattt aagagggatt ccaaaggcga gagacatgga
      661 tctgcagcag aaagattgtt ggctgcccaa aacccctcat ctcatgcgga tcggcctcat
      721 caactctttg ctgatgctcc agtgcctaat atgattcctg taatgagtgg tcaaataatt
      781 ccacctcctc taatggcccc acctccacca ccatctggct catcatcaat gttgccgcct
      841 ccgccacctg taccaccacc acaagcatcg tttgttcccc caccaccttt gccacctatt
      901 ggaagccaag gtataccacc accagtaggc attcctccac caccaagaat gattcctccc
      961 ggggcatggc caacaggagc ccaagctccc ccgccaaact ggaggccacc tgcaaatttt
     1021 ccaccggcgc catttccacc tgcacagttc aatggagatg cctctgttag ttaccaatat
     1081 taaaaaataa aacaaattct tcgctttgat tgctgacatt tttttaaaaa agaataa