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LOCUS XM_013259952 6962 bp mRNA linear INV 02-SEP-2023 transcript variant X5, mRNA. ACCESSION XM_013259952 VERSION XM_013259952.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013259952.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6962 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..6962 /gene="LOC106092969" /note="fasciclin-2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins" /db_xref="GeneID:106092969" CDS 1447..4002 /gene="LOC106092969" /codon_start=1 /product="fasciclin-2 isoform X4" /protein_id="XP_013115406.2" /db_xref="GeneID:106092969" /translation="MGPIGKLKMGRHTAATMASALAAIIFLNFVLIASAVDEPRLEIF PSQKVQRKAVGQAMILTCRPNVPSPNLVADLQWKDNLNNTILPKPMGRNPPMFTEYMT GTESLALIINHLSVEMEGKYYCTASYATNDILETSVTVKTYVGITWTNAPENQNPILG EDYVVRCEVKADPNPTIDWLRDGDQIRSSEKYVVQTHGLLIRNVQESDDGIYTCRAAV VETGELVERTIRVEVYSRPVITYLPTTLEATEGKPFSANCTATGKPVPEIFWIKDANH QNVATADRFLVNPLTGVLNINSVTQDDYGTYTCIAKNDAGVADQKTKLNVLITPSIYY LYNVTGVSEKEVALTCRAKGRPAPAITFRRWGSEDEFTAGAQVDDERIILEQHFDDDK GESSGTLRISKAMRSDDGLYQCLARNTGGTAYSTGHIEVQFRPDFTHMKDLPPVFSWE ERKVNLSCLAMSIPNATIEWRWNGKPIKDIHDKNLEIVGTGPRSDLIVHPVARQYYSV YKCIATNIHGTSEHDMQLKEARVPEPVPAAQPKQLTATSVTFEIRSPPTEFGLPITAF TVQYKEAINPDWSTALNRSWSPDSPYIVEGLKPQTMYHFRFAARNQVGLGLWGVNTQQ STPKRSAPEEPKPLHSPVQNDIEEPVVVSPYSDHFELRWSVPADNGEPIDFYQVKYCP GVKISGTWHELENECQSVEVAESTSYEMTHLAGNTYYRIELRAHNIIGFSSPASVIMK TTRGIDVIQMAERQVLSSASIVGIAVGGVLLLLFIIDLLCCVTINMGVMASMCRRTKR SPSEIDEEAKLGRDEKQPLQTPTESMKQNSTIEFDGKFVHSRSGEIIGKNSAV" ORIGIN 1 agcgtcaaca caaagtagcg ccgtctcaaa gcaaatcgaa cggcaaacac acatcgcagt 61 gaaggtttca caacaatacg actcatcagc aacattgagt tttctacagg aaaaaagagc 121 aataagaatt tttttctgtg aaaagtaacc agcgagtgtg ctgtgccgct gacaagtttc 181 caccaaaaac aataacattg caacaacaac ggaaaggcga ggaagaggaa atagaaaaaa 241 aaaccttata acgcaccaca caccatcgag cagacacttg gctgctccaa gagagagaga 301 gagcgcattt cattgtttgc ctttgtttga tgagagagag agcgggcctt tgtattgttt 361 atcggctttg ttaggtttga gttgaaatgg acgcataaca aaaagacagt tgctttacga 421 taacgaacgt gttaagaacg ttttggctta tagcgaacga gtagtagaat cgaaagaaga 481 aacaagaaaa cataacgggt caagtgtgaa gtggtagtag tggcggtgaa gagaattgaa 541 gaaaaaaatg tgttttttct aactcattgc aagtgaataa ttgaagatca cgaattttaa 601 ttgagaaaat ttacacataa aacaaaccac ttaagttttg tgtttggtgt caaaagccaa 661 aaaagaaaaa caaaagccta attgtgtgga gatcatttaa aaaaaagaat atttaagaat 721 atacacaagc gagaaaaagt aaaacctaat aaaaacacgt ttactgtgtg aagaagaagt 781 ttgttttttg ttggcagtgt gaataatcaa cgacaacaac aataacaaca acatcaaagt 841 tagtggcagt gtgtcaatgg ctaagaaagc caacccaaca attctcacgt gtgcttgctg 901 acttgacttg aagctgaatt ttggcagccg ctggattgaa aataaatgct caacacatgt 961 tccactacaa cggttccatg gtgccataaa taaatttgac aactaattca ataacagcga 1021 ctctattctg gtgctttgat ttcatgttgc accataatca aaatagccaa acaaaaacaa 1081 aaaaaaaact tgcgcaattt atttagtcaa actatagaaa attccaattt tttcgcatag 1141 aggcaaggca atcccccgcc tgtgagcgcc taacaaaagt tgttcaaact taaatgcaaa 1201 gcaaataaag tgattccttt ttttgtacgt gaaaatcgac gaaaccaaag caaataacgg 1261 cgagcaacaa attgattgtt agtttaaaat aaataaatca aaaacaacaa cactaaaaac 1321 aaagaaataa atctataaaa agatttacca aataacaaaa atctaaagca acgccaaaaa 1381 cagagttgct ggcatcacaa catcgacacc agcagcaaca gccaccaaat ctactacacc 1441 gtcattatgg ggcccatagg caaattaaaa atgggccgac atacagcagc gacaatggcc 1501 agcgcattag cagcgattat atttttgaat tttgtcttaa tagcttcggc tgtcgatgaa 1561 cctagactgg aaatttttcc ctcacaaaaa gtccaaagaa aagccgtggg tcaggccatg 1621 attctaacct gtcgccctaa tgttccttca cctaatctag tagctgattt gcagtggaag 1681 gataatttaa ataatacgat attgcccaaa cctatggggc gtaatccacc catgttcacg 1741 gagtatatga ccggcacgga gagtttggcg cttatcatca accacctcag tgtggaaatg 1801 gagggcaaat actattgcac agcatcctat gcgaccaatg atatcctgga gaccagtgtt 1861 acggttaaaa cttatgttgg cattacctgg acaaatgctc cggaaaatca aaaccccatt 1921 ctaggtgagg actatgtggt aagatgtgag gtaaaggctg atcctaatcc cacaattgat 1981 tggttaagag atggtgatca gatacgctcg agcgaaaaat atgtagtgca gacccatggt 2041 cttttgatac gcaatgtcca ggaatctgat gatggcatct acacttgtcg tgccgctgtt 2101 gtggaaaccg gtgaattggt ggaacgcacc attcgcgttg aagtctacag ccgtccagtg 2161 ataacctatt tgcccacaac tttggaggcc actgaaggta aaccattctc ggccaattgc 2221 acggccacag gtaaacccgt accggaaatt ttctggatta aggatgccaa ccatcaaaat 2281 gttgccaccg ccgaccgctt cctggtgaac cctttgactg gtgtcttgaa tattaactca 2341 gtgacccaag atgactacgg cacatataca tgcatagcca agaatgatgc tggcgtggcg 2401 gatcaaaaga caaagctgaa tgttttgatt actccctcga tttactattt gtacaatgta 2461 accggtgtga gcgagaaaga ggtggccctt acctgtcggg ccaagggtcg tcccgcccct 2521 gcaattactt tccgccgttg gggctctgag gatgagttta cagccggtgc tcaagtcgat 2581 gatgaacgca tcattttgga acaacacttt gacgatgata aaggtgaaag cagtggcact 2641 ttgagaatat ccaaagccat gcgctcagac gatggtctgt atcagtgtct tgcgcgcaac 2701 accggaggca ccgcctatag taccggtcac attgaggttc agttccgtcc agatttcaca 2761 cacatgaagg acttgccgcc agtattcagc tgggaggagc gcaaggtgaa tctcagctgt 2821 ttggccatga gcatacccaa tgccaccatt gaatggcgct ggaatggcaa gcccatcaag 2881 gatatacacg acaagaactt ggaaattgta ggcaccggtc ctcgcagcga tttaatagtc 2941 catccggtag ctcgccagta ttattccgtc tacaaatgta ttgccaccaa tattcatggc 3001 accagcgaac atgatatgca gttgaaggag gcccgtgtac ccgaacccgt tcctgcggca 3061 caacccaaac agctgacagc gacaagtgtt acattcgaaa tacgcagtcc ccccacagag 3121 tttggcctac ccattacagc gtttacagtg caatacaaag aagccattaa ccctgattgg 3181 tcaacagcgt taaatcgaag ttggtcaccc gattccccct acattgttga gggactaaaa 3241 cctcagacca tgtaccattt ccgctttgct gcccgcaacc aggtgggatt gggtctgtgg 3301 ggcgtgaata cccagcaatc aacacctaag cgttcggcac ccgaagaacc taagcccttg 3361 cattcgcccg tgcaaaatga tattgaggaa cccgtggtgg tctcacccta ctccgatcac 3421 tttgaactga gatggagtgt gcccgcagac aatggagaac ccattgattt ctatcaagtc 3481 aaatattgtc cgggcgtcaa aatttccggc acttggcatg aactggaaaa cgaatgtcaa 3541 tccgtagagg tagccgaaag cacatcctac gagatgacac acttggctgg caacacctat 3601 taccgcattg aattgcgtgc ccacaacatc atcggcttct cgtcgcccgc gtccgtcatt 3661 atgaaaacaa cacgaggcat cgatgtaata caaatggctg aaagacaagt gctttcctcg 3721 gcctcaattg ttggcattgc tgtgggaggc gttttgctgt tgctcttcat tattgatttg 3781 ttgtgctgtg taaccatcaa tatgggcgtt atggccagca tgtgtcggcg cactaagaga 3841 tcgccttcgg aaatcgatga agaagccaaa ttgggaagag atgaaaaaca gcctttgcaa 3901 acaccaacgg aaagtatgaa acaaaattca accattgaat ttgatggtaa atttgtacat 3961 tcacgaagtg gtgaaattat tggtaaaaat tcagcagtat aaacgatacg tgttgggttt 4021 aagcggacct aagcctaaat gatagatgca tgcgtctgct catgcatacc aaccaagatg 4081 acaaactgga gattagttct gggattttgc ccggaagccg attgggaata aatatgcttc 4141 attattacat acaaaaatac atactttctc tctatctata aaaacaaaaa cataacagaa 4201 atcatgtaca attaagttat atataacgac tatattgttt ccatagtata aaaccataat 4261 tttattaacg catgatagtc atatgacatt tttccaccat aagtttaaac aaatttaagt 4321 gtttttgtgc aagcaagcta atggtgtaaa gatggcatag tgatatgaca acaatcaggt 4381 tcgacattta attaagtttt ttttttattt ttagtcattt cacaaaacat atgcctcatt 4441 agttaaaata ttatcattta tagtattatg cagaagacag aaaccataac atcatcaaca 4501 attattcatt cattcattta ttgccttaat taagatgagt tcttgcatat aagtagactt 4561 aatttgtgcg ataagtttta aggaagaaat tgcatcatat ttgaatagca tgcatacatg 4621 aaaataatta aacgccattt attcataatt ttaatgccat ttttaatcat ttgattttgt 4681 acagataaaa cttaggggtg caatttttgc aacaatcatg cggtgtttta atattttctt 4741 ttttttatga aatttccctc tgattataaa cgacctatta aaaatatttt ttcactaata 4801 ttgagtacta aataatcgtg tttaaagttt tggtaaaatc tttaataagg cagcaaaaca 4861 catttaaact catttacagt ttaccatgaa aattaatttc aatagtgtaa ttgaaagatt 4921 taaatctaat tcattcaata cagcatagtg atgaataact gaagtttaag ttattaaaac 4981 ttaagttaat gaaatcttca ttttgttgaa agcccgttat tttaaccttc atatatattt 5041 tcaccttatg atttcctgag aaattaagca ctccaaccca agcatttcta gttgaatttg 5101 gagtatttaa gaaagtgtaa cactgaaaac atttcaaact ttgaatattt tgaatttctt 5161 tattattagt gaacaatcaa aaaaattttg gttttgtttt tgcccaataa cttacgattc 5221 tactccactg caagcgagtc aaatgtgttt agaatggcac cacctaaaac atctagattt 5281 atttcattta tttgctctat tatgagtgat ttaaattttt ggtttagaaa aaatttcata 5341 tttattggta cttaattaac tcaaaaaagt ttcatgtatt gacaagactt atttatcggc 5401 tcccagtttc tttttgtttt gtattaagaa aattattcat taaatacata ataattatac 5461 tttatagtta ctctaagtgt aaattgtggc ttatgtgaat aaaatttcag ctattaagag 5521 agaaaggaat aaataaattc catatatata cattcatcag ttcatacata gagacataca 5581 tataaatata tattatattt aataaatcaa acgattcatg acaacaaatg aacaaataac 5641 aaaatgctca ataaaaatac ttaaaattta tatacagacc cacatattta agaaaacaaa 5701 agataagcga tgtatgcgtt ttaaataatt tttttgtttt aatgtttcat taaggtttga 5761 aaccaatacg aaggaatgca ttggatttgt ctcctttggt atttgtctcc tttagggttt 5821 tatacctcga tgaaaataat gatgcattta taattaaaaa aaaaatcttg agatgcaatg 5881 ttctaaaaaa accaaagaaa ttttagaaat agggaataag gaaaatgtca agctcttatt 5941 ttacataaac aaaattcaaa aaggtgacct aattctatcg ccttctaatt aaaatataat 6001 tttccttaat acattagcag taattttaca attctcctgg attttgtact gattgcatct 6061 ctggattttt ccctgtgttt gtataatctg acttttattt tttgtgctaa cttgtaaaaa 6121 tatctacaca ataagttacc gtaaggcaaa tccttacaca taggttaaat ttaacataag 6181 taaatgtatt tattagttct aagatttaca ataaacaaca acaatttcca ccattaacta 6241 taaatataca aaaaacgtac ataaaaatct acaaaaaaca ataaaacata aaaaattcct 6301 taaaaatatg aagaaaaaaa aacaacattg aatatttatt ttgcatttca ttcagcgttt 6361 atccctattt tttattaata aagtttatat tatgttgtct tttattaagt ttgccccgaa 6421 ccaaaaaaaa aacaaaaccc agaagacaag cgccttttaa gagcttctta aaatcaaatg 6481 tacttatatg taaagctatt tagcaaaatg ataaaaatca caacagaaaa caatctataa 6541 aatgaacgtt tgaacgttaa ggatacattt ttgtacaaaa aaattatata aatatacgtt 6601 tgggccatta tcatcataat atacctaaat tcgcttacat taccaaaata aaaagagtcg 6661 taaatttaaa aacggaacat aataaaggcg aatttcaata cagacacctt aattcaaaaa 6721 aaaaaaaaaa acacaagaaa aactttattt atacctatat acacccaacg ttacaacatg 6781 gtcaccaaaa aagagataca aacgcattta attttttata agttcttcat aagtttaaaa 6841 ctgaatacaa agggctagaa gtgaaaacgg atgtagcttt tctatctcaa cataagatgt 6901 atattgtgct tctttttcct gagaaaataa cacaataaat aaataactcc cgaatacata 6961 ac