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LOCUS XM_013259944 7016 bp mRNA linear INV 02-SEP-2023 transcript variant X4, mRNA. ACCESSION XM_013259944 VERSION XM_013259944.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013259944.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7016 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..7016 /gene="LOC106092969" /note="fasciclin-2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins" /db_xref="GeneID:106092969" CDS 1447..4056 /gene="LOC106092969" /codon_start=1 /product="fasciclin-2 isoform X3" /protein_id="XP_013115398.2" /db_xref="GeneID:106092969" /translation="MGPIGKLKMGRHTAATMASALAAIIFLNFVLIASAVDEPRLEIF PSQKVQRKAVGQAMILTCRPNVPSPNLVADLQWKDNLNNTILPKPHQIYQPVYDSKGH RIRDNMGRNPPMFTEYMTGTESLALIINHLSVEMEGKYYCTASYATNDILETSVTVKT YVGITWTNAPENQNPILGEDYVVRCEVKADPNPTIDWLRDGDQIRSSEKYVVQTHGLL IRNVQESDDGIYTCRAAVVETGELVERTIRVEVYSRPVITYLPTTLEATEGKPFSANC TATGKPVPEIFWIKDANHQNVATADRFLVNPLTGVLNINSVTQDDYGTYTCIAKNDAG VADQKTKLNVLITPSIYYLYNVTGVSEKEVALTCRAKGRPAPAITFRRWGSEDEFTAG AQVDDERIILEQHFDDDKGESSGTLRISKAMRSDDGLYQCLARNTGGTAYSTGHIEVQ FRPDFTHMKDLPPVFSWEERKVNLSCLAMSIPNATIEWRWNGKPIKDIHDKNLEIVGT GPRSDLIVHPVARQYYSVYKCIATNIHGTSEHDMQLKEARVPEPVPAAQPKQLTATSV TFEIRSPPTEFGLPITAFTVQYKEAINPDWSTALNRSWSPDSPYIVEGLKPQTMYHFR FAARNQVGLGLWGVNTQQSTPKRSAPEEPKPLHSPVQNDIEEPVVVSPYSDHFELRWS VPADNGEPIDFYQVKYCPGVKISGTWHELENECQSVEVAESTSYEMTHLAGNTYYRIE LRAHNIIGFSSPASVIMKTTRGIDVIQMAERQVLSSASIVGIAVGGVLLLLFIIDLLC CVTINMGVMASMCRRTKRSPSEIDEEAKLGRDEKQPLQTPTESMKQNSTIEFDGKFVH SRSGEIIGKNSAV" ORIGIN 1 agcgtcaaca caaagtagcg ccgtctcaaa gcaaatcgaa cggcaaacac acatcgcagt 61 gaaggtttca caacaatacg actcatcagc aacattgagt tttctacagg aaaaaagagc 121 aataagaatt tttttctgtg aaaagtaacc agcgagtgtg ctgtgccgct gacaagtttc 181 caccaaaaac aataacattg caacaacaac ggaaaggcga ggaagaggaa atagaaaaaa 241 aaaccttata acgcaccaca caccatcgag cagacacttg gctgctccaa gagagagaga 301 gagcgcattt cattgtttgc ctttgtttga tgagagagag agcgggcctt tgtattgttt 361 atcggctttg ttaggtttga gttgaaatgg acgcataaca aaaagacagt tgctttacga 421 taacgaacgt gttaagaacg ttttggctta tagcgaacga gtagtagaat cgaaagaaga 481 aacaagaaaa cataacgggt caagtgtgaa gtggtagtag tggcggtgaa gagaattgaa 541 gaaaaaaatg tgttttttct aactcattgc aagtgaataa ttgaagatca cgaattttaa 601 ttgagaaaat ttacacataa aacaaaccac ttaagttttg tgtttggtgt caaaagccaa 661 aaaagaaaaa caaaagccta attgtgtgga gatcatttaa aaaaaagaat atttaagaat 721 atacacaagc gagaaaaagt aaaacctaat aaaaacacgt ttactgtgtg aagaagaagt 781 ttgttttttg ttggcagtgt gaataatcaa cgacaacaac aataacaaca acatcaaagt 841 tagtggcagt gtgtcaatgg ctaagaaagc caacccaaca attctcacgt gtgcttgctg 901 acttgacttg aagctgaatt ttggcagccg ctggattgaa aataaatgct caacacatgt 961 tccactacaa cggttccatg gtgccataaa taaatttgac aactaattca ataacagcga 1021 ctctattctg gtgctttgat ttcatgttgc accataatca aaatagccaa acaaaaacaa 1081 aaaaaaaact tgcgcaattt atttagtcaa actatagaaa attccaattt tttcgcatag 1141 aggcaaggca atcccccgcc tgtgagcgcc taacaaaagt tgttcaaact taaatgcaaa 1201 gcaaataaag tgattccttt ttttgtacgt gaaaatcgac gaaaccaaag caaataacgg 1261 cgagcaacaa attgattgtt agtttaaaat aaataaatca aaaacaacaa cactaaaaac 1321 aaagaaataa atctataaaa agatttacca aataacaaaa atctaaagca acgccaaaaa 1381 cagagttgct ggcatcacaa catcgacacc agcagcaaca gccaccaaat ctactacacc 1441 gtcattatgg ggcccatagg caaattaaaa atgggccgac atacagcagc gacaatggcc 1501 agcgcattag cagcgattat atttttgaat tttgtcttaa tagcttcggc tgtcgatgaa 1561 cctagactgg aaatttttcc ctcacaaaaa gtccaaagaa aagccgtggg tcaggccatg 1621 attctaacct gtcgccctaa tgttccttca cctaatctag tagctgattt gcagtggaag 1681 gataatttaa ataatacgat attgcccaaa ccgcaccaaa tttatcaacc agtgtatgat 1741 tccaaaggac atagaatacg tgataatatg gggcgtaatc cacccatgtt cacggagtat 1801 atgaccggca cggagagttt ggcgcttatc atcaaccacc tcagtgtgga aatggagggc 1861 aaatactatt gcacagcatc ctatgcgacc aatgatatcc tggagaccag tgttacggtt 1921 aaaacttatg ttggcattac ctggacaaat gctccggaaa atcaaaaccc cattctaggt 1981 gaggactatg tggtaagatg tgaggtaaag gctgatccta atcccacaat tgattggtta 2041 agagatggtg atcagatacg ctcgagcgaa aaatatgtag tgcagaccca tggtcttttg 2101 atacgcaatg tccaggaatc tgatgatggc atctacactt gtcgtgccgc tgttgtggaa 2161 accggtgaat tggtggaacg caccattcgc gttgaagtct acagccgtcc agtgataacc 2221 tatttgccca caactttgga ggccactgaa ggtaaaccat tctcggccaa ttgcacggcc 2281 acaggtaaac ccgtaccgga aattttctgg attaaggatg ccaaccatca aaatgttgcc 2341 accgccgacc gcttcctggt gaaccctttg actggtgtct tgaatattaa ctcagtgacc 2401 caagatgact acggcacata tacatgcata gccaagaatg atgctggcgt ggcggatcaa 2461 aagacaaagc tgaatgtttt gattactccc tcgatttact atttgtacaa tgtaaccggt 2521 gtgagcgaga aagaggtggc ccttacctgt cgggccaagg gtcgtcccgc ccctgcaatt 2581 actttccgcc gttggggctc tgaggatgag tttacagccg gtgctcaagt cgatgatgaa 2641 cgcatcattt tggaacaaca ctttgacgat gataaaggtg aaagcagtgg cactttgaga 2701 atatccaaag ccatgcgctc agacgatggt ctgtatcagt gtcttgcgcg caacaccgga 2761 ggcaccgcct atagtaccgg tcacattgag gttcagttcc gtccagattt cacacacatg 2821 aaggacttgc cgccagtatt cagctgggag gagcgcaagg tgaatctcag ctgtttggcc 2881 atgagcatac ccaatgccac cattgaatgg cgctggaatg gcaagcccat caaggatata 2941 cacgacaaga acttggaaat tgtaggcacc ggtcctcgca gcgatttaat agtccatccg 3001 gtagctcgcc agtattattc cgtctacaaa tgtattgcca ccaatattca tggcaccagc 3061 gaacatgata tgcagttgaa ggaggcccgt gtacccgaac ccgttcctgc ggcacaaccc 3121 aaacagctga cagcgacaag tgttacattc gaaatacgca gtccccccac agagtttggc 3181 ctacccatta cagcgtttac agtgcaatac aaagaagcca ttaaccctga ttggtcaaca 3241 gcgttaaatc gaagttggtc acccgattcc ccctacattg ttgagggact aaaacctcag 3301 accatgtacc atttccgctt tgctgcccgc aaccaggtgg gattgggtct gtggggcgtg 3361 aatacccagc aatcaacacc taagcgttcg gcacccgaag aacctaagcc cttgcattcg 3421 cccgtgcaaa atgatattga ggaacccgtg gtggtctcac cctactccga tcactttgaa 3481 ctgagatgga gtgtgcccgc agacaatgga gaacccattg atttctatca agtcaaatat 3541 tgtccgggcg tcaaaatttc cggcacttgg catgaactgg aaaacgaatg tcaatccgta 3601 gaggtagccg aaagcacatc ctacgagatg acacacttgg ctggcaacac ctattaccgc 3661 attgaattgc gtgcccacaa catcatcggc ttctcgtcgc ccgcgtccgt cattatgaaa 3721 acaacacgag gcatcgatgt aatacaaatg gctgaaagac aagtgctttc ctcggcctca 3781 attgttggca ttgctgtggg aggcgttttg ctgttgctct tcattattga tttgttgtgc 3841 tgtgtaacca tcaatatggg cgttatggcc agcatgtgtc ggcgcactaa gagatcgcct 3901 tcggaaatcg atgaagaagc caaattggga agagatgaaa aacagccttt gcaaacacca 3961 acggaaagta tgaaacaaaa ttcaaccatt gaatttgatg gtaaatttgt acattcacga 4021 agtggtgaaa ttattggtaa aaattcagca gtataaacga tacgtgttgg gtttaagcgg 4081 acctaagcct aaatgataga tgcatgcgtc tgctcatgca taccaaccaa gatgacaaac 4141 tggagattag ttctgggatt ttgcccggaa gccgattggg aataaatatg cttcattatt 4201 acatacaaaa atacatactt tctctctatc tataaaaaca aaaacataac agaaatcatg 4261 tacaattaag ttatatataa cgactatatt gtttccatag tataaaacca taattttatt 4321 aacgcatgat agtcatatga catttttcca ccataagttt aaacaaattt aagtgttttt 4381 gtgcaagcaa gctaatggtg taaagatggc atagtgatat gacaacaatc aggttcgaca 4441 tttaattaag tttttttttt atttttagtc atttcacaaa acatatgcct cattagttaa 4501 aatattatca tttatagtat tatgcagaag acagaaacca taacatcatc aacaattatt 4561 cattcattca tttattgcct taattaagat gagttcttgc atataagtag acttaatttg 4621 tgcgataagt tttaaggaag aaattgcatc atatttgaat agcatgcata catgaaaata 4681 attaaacgcc atttattcat aattttaatg ccatttttaa tcatttgatt ttgtacagat 4741 aaaacttagg ggtgcaattt ttgcaacaat catgcggtgt tttaatattt tctttttttt 4801 atgaaatttc cctctgatta taaacgacct attaaaaata ttttttcact aatattgagt 4861 actaaataat cgtgtttaaa gttttggtaa aatctttaat aaggcagcaa aacacattta 4921 aactcattta cagtttacca tgaaaattaa tttcaatagt gtaattgaaa gatttaaatc 4981 taattcattc aatacagcat agtgatgaat aactgaagtt taagttatta aaacttaagt 5041 taatgaaatc ttcattttgt tgaaagcccg ttattttaac cttcatatat attttcacct 5101 tatgatttcc tgagaaatta agcactccaa cccaagcatt tctagttgaa tttggagtat 5161 ttaagaaagt gtaacactga aaacatttca aactttgaat attttgaatt tctttattat 5221 tagtgaacaa tcaaaaaaat tttggttttg tttttgccca ataacttacg attctactcc 5281 actgcaagcg agtcaaatgt gtttagaatg gcaccaccta aaacatctag atttatttca 5341 tttatttgct ctattatgag tgatttaaat ttttggttta gaaaaaattt catatttatt 5401 ggtacttaat taactcaaaa aagtttcatg tattgacaag acttatttat cggctcccag 5461 tttctttttg ttttgtatta agaaaattat tcattaaata cataataatt atactttata 5521 gttactctaa gtgtaaattg tggcttatgt gaataaaatt tcagctatta agagagaaag 5581 gaataaataa attccatata tatacattca tcagttcata catagagaca tacatataaa 5641 tatatattat atttaataaa tcaaacgatt catgacaaca aatgaacaaa taacaaaatg 5701 ctcaataaaa atacttaaaa tttatataca gacccacata tttaagaaaa caaaagataa 5761 gcgatgtatg cgttttaaat aatttttttg ttttaatgtt tcattaaggt ttgaaaccaa 5821 tacgaaggaa tgcattggat ttgtctcctt tggtatttgt ctcctttagg gttttatacc 5881 tcgatgaaaa taatgatgca tttataatta aaaaaaaaat cttgagatgc aatgttctaa 5941 aaaaaccaaa gaaattttag aaatagggaa taaggaaaat gtcaagctct tattttacat 6001 aaacaaaatt caaaaaggtg acctaattct atcgccttct aattaaaata taattttcct 6061 taatacatta gcagtaattt tacaattctc ctggattttg tactgattgc atctctggat 6121 ttttccctgt gtttgtataa tctgactttt attttttgtg ctaacttgta aaaatatcta 6181 cacaataagt taccgtaagg caaatcctta cacataggtt aaatttaaca taagtaaatg 6241 tatttattag ttctaagatt tacaataaac aacaacaatt tccaccatta actataaata 6301 tacaaaaaac gtacataaaa atctacaaaa aacaataaaa cataaaaaat tccttaaaaa 6361 tatgaagaaa aaaaaacaac attgaatatt tattttgcat ttcattcagc gtttatccct 6421 attttttatt aataaagttt atattatgtt gtcttttatt aagtttgccc cgaaccaaaa 6481 aaaaaacaaa acccagaaga caagcgcctt ttaagagctt cttaaaatca aatgtactta 6541 tatgtaaagc tatttagcaa aatgataaaa atcacaacag aaaacaatct ataaaatgaa 6601 cgtttgaacg ttaaggatac atttttgtac aaaaaaatta tataaatata cgtttgggcc 6661 attatcatca taatatacct aaattcgctt acattaccaa aataaaaaga gtcgtaaatt 6721 taaaaacgga acataataaa ggcgaatttc aatacagaca ccttaattca aaaaaaaaaa 6781 aaaaacacaa gaaaaacttt atttatacct atatacaccc aacgttacaa catggtcacc 6841 aaaaaagaga tacaaacgca tttaattttt tataagttct tcataagttt aaaactgaat 6901 acaaagggct agaagtgaaa acggatgtag cttttctatc tcaacataag atgtatattg 6961 tgcttctttt tcctgagaaa ataacacaat aaataaataa ctcccgaata cataac