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LOCUS XM_013259935 7049 bp mRNA linear INV 02-SEP-2023 transcript variant X3, mRNA. ACCESSION XM_013259935 VERSION XM_013259935.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013259935.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7049 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..7049 /gene="LOC106092969" /note="fasciclin-2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins" /db_xref="GeneID:106092969" CDS 1447..4089 /gene="LOC106092969" /codon_start=1 /product="fasciclin-2 isoform X2" /protein_id="XP_013115389.2" /db_xref="GeneID:106092969" /translation="MGPIGKLKMGRHTAATMASALAAIIFLNFVLIASAVDEPRLEIF PSQKVQRKAVGQAMILTCRPNVPSPNLVADLQWKDNLNNTILPKPMGRNPPMFTEYMT GTESLALIINHLSVEMEGKYYCTASYATNDILETSVTVKTYVGITWTNAPENQNPILG EDYVVRCEVKADPNPTIDWLRDGDQIRSSEKYVVQTHGLLIRNVQESDDGIYTCRAAV VETGELVERTIRVEVYSRPVITYLPTTLEATEGKPFSANCTATGKPVPEIFWIKDANH QNVATADRFLVNPLTGVLNINSVTQDDYGTYTCIAKNDAGVADQKTKLNVLITPSIYY LYNVTGVSEKEVALTCRAKGRPAPAITFRRWGSEDEFTAGAQVDDERIILEQHFDDDK GESSGTLRISKAMRSDDGLYQCLARNTGGTAYSTGHIEVQFRPDFTHMKDLPPVFSWE ERKVNLSCLAMSIPNATIEWRWNGKPIKDIHDKNLEIVGTGPRSDLIVHPVARQYYSV YKCIATNIHGTSEHDMQLKEARVPEPVPAAQPKQLTATSVTFEIRSPPTEFGLPITAF TVQYKEAINPDWSTALNRSWSPDSPYIVEGLKPQTMYHFRFAARNQVGLGLWGVNTQQ STPKRSAPEEPKPLHSPVQNDIEEPVVVSPYSDHFELRWSVPADNGEPIDFYQVKYCP GVKISGTWHELENECQSVEVAESTSYEMTHLAGNTYYRIELRAHNIIGFSSPASVIMK TTRGIDVIQMAERQVLSSASIVGIAVGGVLLLLFIIDLLCCVTINMGVMASMCRRTKR SPSEIDEEAKLGSGQLVKEPPPSPLPLPPPVKLGGSPMISPSDEKQPLQTPTESMKQN STIEFDGKFVHSRSGEIIGKNSAV" ORIGIN 1 agcgtcaaca caaagtagcg ccgtctcaaa gcaaatcgaa cggcaaacac acatcgcagt 61 gaaggtttca caacaatacg actcatcagc aacattgagt tttctacagg aaaaaagagc 121 aataagaatt tttttctgtg aaaagtaacc agcgagtgtg ctgtgccgct gacaagtttc 181 caccaaaaac aataacattg caacaacaac ggaaaggcga ggaagaggaa atagaaaaaa 241 aaaccttata acgcaccaca caccatcgag cagacacttg gctgctccaa gagagagaga 301 gagcgcattt cattgtttgc ctttgtttga tgagagagag agcgggcctt tgtattgttt 361 atcggctttg ttaggtttga gttgaaatgg acgcataaca aaaagacagt tgctttacga 421 taacgaacgt gttaagaacg ttttggctta tagcgaacga gtagtagaat cgaaagaaga 481 aacaagaaaa cataacgggt caagtgtgaa gtggtagtag tggcggtgaa gagaattgaa 541 gaaaaaaatg tgttttttct aactcattgc aagtgaataa ttgaagatca cgaattttaa 601 ttgagaaaat ttacacataa aacaaaccac ttaagttttg tgtttggtgt caaaagccaa 661 aaaagaaaaa caaaagccta attgtgtgga gatcatttaa aaaaaagaat atttaagaat 721 atacacaagc gagaaaaagt aaaacctaat aaaaacacgt ttactgtgtg aagaagaagt 781 ttgttttttg ttggcagtgt gaataatcaa cgacaacaac aataacaaca acatcaaagt 841 tagtggcagt gtgtcaatgg ctaagaaagc caacccaaca attctcacgt gtgcttgctg 901 acttgacttg aagctgaatt ttggcagccg ctggattgaa aataaatgct caacacatgt 961 tccactacaa cggttccatg gtgccataaa taaatttgac aactaattca ataacagcga 1021 ctctattctg gtgctttgat ttcatgttgc accataatca aaatagccaa acaaaaacaa 1081 aaaaaaaact tgcgcaattt atttagtcaa actatagaaa attccaattt tttcgcatag 1141 aggcaaggca atcccccgcc tgtgagcgcc taacaaaagt tgttcaaact taaatgcaaa 1201 gcaaataaag tgattccttt ttttgtacgt gaaaatcgac gaaaccaaag caaataacgg 1261 cgagcaacaa attgattgtt agtttaaaat aaataaatca aaaacaacaa cactaaaaac 1321 aaagaaataa atctataaaa agatttacca aataacaaaa atctaaagca acgccaaaaa 1381 cagagttgct ggcatcacaa catcgacacc agcagcaaca gccaccaaat ctactacacc 1441 gtcattatgg ggcccatagg caaattaaaa atgggccgac atacagcagc gacaatggcc 1501 agcgcattag cagcgattat atttttgaat tttgtcttaa tagcttcggc tgtcgatgaa 1561 cctagactgg aaatttttcc ctcacaaaaa gtccaaagaa aagccgtggg tcaggccatg 1621 attctaacct gtcgccctaa tgttccttca cctaatctag tagctgattt gcagtggaag 1681 gataatttaa ataatacgat attgcccaaa cctatggggc gtaatccacc catgttcacg 1741 gagtatatga ccggcacgga gagtttggcg cttatcatca accacctcag tgtggaaatg 1801 gagggcaaat actattgcac agcatcctat gcgaccaatg atatcctgga gaccagtgtt 1861 acggttaaaa cttatgttgg cattacctgg acaaatgctc cggaaaatca aaaccccatt 1921 ctaggtgagg actatgtggt aagatgtgag gtaaaggctg atcctaatcc cacaattgat 1981 tggttaagag atggtgatca gatacgctcg agcgaaaaat atgtagtgca gacccatggt 2041 cttttgatac gcaatgtcca ggaatctgat gatggcatct acacttgtcg tgccgctgtt 2101 gtggaaaccg gtgaattggt ggaacgcacc attcgcgttg aagtctacag ccgtccagtg 2161 ataacctatt tgcccacaac tttggaggcc actgaaggta aaccattctc ggccaattgc 2221 acggccacag gtaaacccgt accggaaatt ttctggatta aggatgccaa ccatcaaaat 2281 gttgccaccg ccgaccgctt cctggtgaac cctttgactg gtgtcttgaa tattaactca 2341 gtgacccaag atgactacgg cacatataca tgcatagcca agaatgatgc tggcgtggcg 2401 gatcaaaaga caaagctgaa tgttttgatt actccctcga tttactattt gtacaatgta 2461 accggtgtga gcgagaaaga ggtggccctt acctgtcggg ccaagggtcg tcccgcccct 2521 gcaattactt tccgccgttg gggctctgag gatgagttta cagccggtgc tcaagtcgat 2581 gatgaacgca tcattttgga acaacacttt gacgatgata aaggtgaaag cagtggcact 2641 ttgagaatat ccaaagccat gcgctcagac gatggtctgt atcagtgtct tgcgcgcaac 2701 accggaggca ccgcctatag taccggtcac attgaggttc agttccgtcc agatttcaca 2761 cacatgaagg acttgccgcc agtattcagc tgggaggagc gcaaggtgaa tctcagctgt 2821 ttggccatga gcatacccaa tgccaccatt gaatggcgct ggaatggcaa gcccatcaag 2881 gatatacacg acaagaactt ggaaattgta ggcaccggtc ctcgcagcga tttaatagtc 2941 catccggtag ctcgccagta ttattccgtc tacaaatgta ttgccaccaa tattcatggc 3001 accagcgaac atgatatgca gttgaaggag gcccgtgtac ccgaacccgt tcctgcggca 3061 caacccaaac agctgacagc gacaagtgtt acattcgaaa tacgcagtcc ccccacagag 3121 tttggcctac ccattacagc gtttacagtg caatacaaag aagccattaa ccctgattgg 3181 tcaacagcgt taaatcgaag ttggtcaccc gattccccct acattgttga gggactaaaa 3241 cctcagacca tgtaccattt ccgctttgct gcccgcaacc aggtgggatt gggtctgtgg 3301 ggcgtgaata cccagcaatc aacacctaag cgttcggcac ccgaagaacc taagcccttg 3361 cattcgcccg tgcaaaatga tattgaggaa cccgtggtgg tctcacccta ctccgatcac 3421 tttgaactga gatggagtgt gcccgcagac aatggagaac ccattgattt ctatcaagtc 3481 aaatattgtc cgggcgtcaa aatttccggc acttggcatg aactggaaaa cgaatgtcaa 3541 tccgtagagg tagccgaaag cacatcctac gagatgacac acttggctgg caacacctat 3601 taccgcattg aattgcgtgc ccacaacatc atcggcttct cgtcgcccgc gtccgtcatt 3661 atgaaaacaa cacgaggcat cgatgtaata caaatggctg aaagacaagt gctttcctcg 3721 gcctcaattg ttggcattgc tgtgggaggc gttttgctgt tgctcttcat tattgatttg 3781 ttgtgctgtg taaccatcaa tatgggcgtt atggccagca tgtgtcggcg cactaagaga 3841 tcgccttcgg aaatcgatga agaagccaaa ttgggaagtg gccagctggt taaggagccc 3901 ccaccatcac cgttaccttt accgccacca gtcaaattag gtggatcccc catgatatca 3961 ccatcagatg aaaaacagcc tttgcaaaca ccaacggaaa gtatgaaaca aaattcaacc 4021 attgaatttg atggtaaatt tgtacattca cgaagtggtg aaattattgg taaaaattca 4081 gcagtataaa cgatacgtgt tgggtttaag cggacctaag cctaaatgat agatgcatgc 4141 gtctgctcat gcataccaac caagatgaca aactggagat tagttctggg attttgcccg 4201 gaagccgatt gggaataaat atgcttcatt attacataca aaaatacata ctttctctct 4261 atctataaaa acaaaaacat aacagaaatc atgtacaatt aagttatata taacgactat 4321 attgtttcca tagtataaaa ccataatttt attaacgcat gatagtcata tgacattttt 4381 ccaccataag tttaaacaaa tttaagtgtt tttgtgcaag caagctaatg gtgtaaagat 4441 ggcatagtga tatgacaaca atcaggttcg acatttaatt aagttttttt tttattttta 4501 gtcatttcac aaaacatatg cctcattagt taaaatatta tcatttatag tattatgcag 4561 aagacagaaa ccataacatc atcaacaatt attcattcat tcatttattg ccttaattaa 4621 gatgagttct tgcatataag tagacttaat ttgtgcgata agttttaagg aagaaattgc 4681 atcatatttg aatagcatgc atacatgaaa ataattaaac gccatttatt cataatttta 4741 atgccatttt taatcatttg attttgtaca gataaaactt aggggtgcaa tttttgcaac 4801 aatcatgcgg tgttttaata ttttcttttt tttatgaaat ttccctctga ttataaacga 4861 cctattaaaa atattttttc actaatattg agtactaaat aatcgtgttt aaagttttgg 4921 taaaatcttt aataaggcag caaaacacat ttaaactcat ttacagttta ccatgaaaat 4981 taatttcaat agtgtaattg aaagatttaa atctaattca ttcaatacag catagtgatg 5041 aataactgaa gtttaagtta ttaaaactta agttaatgaa atcttcattt tgttgaaagc 5101 ccgttatttt aaccttcata tatattttca ccttatgatt tcctgagaaa ttaagcactc 5161 caacccaagc atttctagtt gaatttggag tatttaagaa agtgtaacac tgaaaacatt 5221 tcaaactttg aatattttga atttctttat tattagtgaa caatcaaaaa aattttggtt 5281 ttgtttttgc ccaataactt acgattctac tccactgcaa gcgagtcaaa tgtgtttaga 5341 atggcaccac ctaaaacatc tagatttatt tcatttattt gctctattat gagtgattta 5401 aatttttggt ttagaaaaaa tttcatattt attggtactt aattaactca aaaaagtttc 5461 atgtattgac aagacttatt tatcggctcc cagtttcttt ttgttttgta ttaagaaaat 5521 tattcattaa atacataata attatacttt atagttactc taagtgtaaa ttgtggctta 5581 tgtgaataaa atttcagcta ttaagagaga aaggaataaa taaattccat atatatacat 5641 tcatcagttc atacatagag acatacatat aaatatatat tatatttaat aaatcaaacg 5701 attcatgaca acaaatgaac aaataacaaa atgctcaata aaaatactta aaatttatat 5761 acagacccac atatttaaga aaacaaaaga taagcgatgt atgcgtttta aataattttt 5821 ttgttttaat gtttcattaa ggtttgaaac caatacgaag gaatgcattg gatttgtctc 5881 ctttggtatt tgtctccttt agggttttat acctcgatga aaataatgat gcatttataa 5941 ttaaaaaaaa aatcttgaga tgcaatgttc taaaaaaacc aaagaaattt tagaaatagg 6001 gaataaggaa aatgtcaagc tcttatttta cataaacaaa attcaaaaag gtgacctaat 6061 tctatcgcct tctaattaaa atataatttt ccttaataca ttagcagtaa ttttacaatt 6121 ctcctggatt ttgtactgat tgcatctctg gatttttccc tgtgtttgta taatctgact 6181 tttatttttt gtgctaactt gtaaaaatat ctacacaata agttaccgta aggcaaatcc 6241 ttacacatag gttaaattta acataagtaa atgtatttat tagttctaag atttacaata 6301 aacaacaaca atttccacca ttaactataa atatacaaaa aacgtacata aaaatctaca 6361 aaaaacaata aaacataaaa aattccttaa aaatatgaag aaaaaaaaac aacattgaat 6421 atttattttg catttcattc agcgtttatc cctatttttt attaataaag tttatattat 6481 gttgtctttt attaagtttg ccccgaacca aaaaaaaaac aaaacccaga agacaagcgc 6541 cttttaagag cttcttaaaa tcaaatgtac ttatatgtaa agctatttag caaaatgata 6601 aaaatcacaa cagaaaacaa tctataaaat gaacgtttga acgttaagga tacatttttg 6661 tacaaaaaaa ttatataaat atacgtttgg gccattatca tcataatata cctaaattcg 6721 cttacattac caaaataaaa agagtcgtaa atttaaaaac ggaacataat aaaggcgaat 6781 ttcaatacag acaccttaat tcaaaaaaaa aaaaaaaaca caagaaaaac tttatttata 6841 cctatataca cccaacgtta caacatggtc accaaaaaag agatacaaac gcatttaatt 6901 ttttataagt tcttcataag tttaaaactg aatacaaagg gctagaagtg aaaacggatg 6961 tagcttttct atctcaacat aagatgtata ttgtgcttct ttttcctgag aaaataacac 7021 aataaataaa taactcccga atacataac