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LOCUS XM_013259927 7103 bp mRNA linear INV 02-SEP-2023 transcript variant X1, mRNA. ACCESSION XM_013259927 VERSION XM_013259927.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013259927.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7103 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..7103 /gene="LOC106092969" /note="fasciclin-2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins" /db_xref="GeneID:106092969" CDS 1447..4143 /gene="LOC106092969" /codon_start=1 /product="fasciclin-2 isoform X1" /protein_id="XP_013115381.2" /db_xref="GeneID:106092969" /translation="MGPIGKLKMGRHTAATMASALAAIIFLNFVLIASAVDEPRLEIF PSQKVQRKAVGQAMILTCRPNVPSPNLVADLQWKDNLNNTILPKPHQIYQPVYDSKGH RIRDNMGRNPPMFTEYMTGTESLALIINHLSVEMEGKYYCTASYATNDILETSVTVKT YVGITWTNAPENQNPILGEDYVVRCEVKADPNPTIDWLRDGDQIRSSEKYVVQTHGLL IRNVQESDDGIYTCRAAVVETGELVERTIRVEVYSRPVITYLPTTLEATEGKPFSANC TATGKPVPEIFWIKDANHQNVATADRFLVNPLTGVLNINSVTQDDYGTYTCIAKNDAG VADQKTKLNVLITPSIYYLYNVTGVSEKEVALTCRAKGRPAPAITFRRWGSEDEFTAG AQVDDERIILEQHFDDDKGESSGTLRISKAMRSDDGLYQCLARNTGGTAYSTGHIEVQ FRPDFTHMKDLPPVFSWEERKVNLSCLAMSIPNATIEWRWNGKPIKDIHDKNLEIVGT GPRSDLIVHPVARQYYSVYKCIATNIHGTSEHDMQLKEARVPEPVPAAQPKQLTATSV TFEIRSPPTEFGLPITAFTVQYKEAINPDWSTALNRSWSPDSPYIVEGLKPQTMYHFR FAARNQVGLGLWGVNTQQSTPKRSAPEEPKPLHSPVQNDIEEPVVVSPYSDHFELRWS VPADNGEPIDFYQVKYCPGVKISGTWHELENECQSVEVAESTSYEMTHLAGNTYYRIE LRAHNIIGFSSPASVIMKTTRGIDVIQMAERQVLSSASIVGIAVGGVLLLLFIIDLLC CVTINMGVMASMCRRTKRSPSEIDEEAKLGSGQLVKEPPPSPLPLPPPVKLGGSPMIS PSDEKQPLQTPTESMKQNSTIEFDGKFVHSRSGEIIGKNSAV" ORIGIN 1 agcgtcaaca caaagtagcg ccgtctcaaa gcaaatcgaa cggcaaacac acatcgcagt 61 gaaggtttca caacaatacg actcatcagc aacattgagt tttctacagg aaaaaagagc 121 aataagaatt tttttctgtg aaaagtaacc agcgagtgtg ctgtgccgct gacaagtttc 181 caccaaaaac aataacattg caacaacaac ggaaaggcga ggaagaggaa atagaaaaaa 241 aaaccttata acgcaccaca caccatcgag cagacacttg gctgctccaa gagagagaga 301 gagcgcattt cattgtttgc ctttgtttga tgagagagag agcgggcctt tgtattgttt 361 atcggctttg ttaggtttga gttgaaatgg acgcataaca aaaagacagt tgctttacga 421 taacgaacgt gttaagaacg ttttggctta tagcgaacga gtagtagaat cgaaagaaga 481 aacaagaaaa cataacgggt caagtgtgaa gtggtagtag tggcggtgaa gagaattgaa 541 gaaaaaaatg tgttttttct aactcattgc aagtgaataa ttgaagatca cgaattttaa 601 ttgagaaaat ttacacataa aacaaaccac ttaagttttg tgtttggtgt caaaagccaa 661 aaaagaaaaa caaaagccta attgtgtgga gatcatttaa aaaaaagaat atttaagaat 721 atacacaagc gagaaaaagt aaaacctaat aaaaacacgt ttactgtgtg aagaagaagt 781 ttgttttttg ttggcagtgt gaataatcaa cgacaacaac aataacaaca acatcaaagt 841 tagtggcagt gtgtcaatgg ctaagaaagc caacccaaca attctcacgt gtgcttgctg 901 acttgacttg aagctgaatt ttggcagccg ctggattgaa aataaatgct caacacatgt 961 tccactacaa cggttccatg gtgccataaa taaatttgac aactaattca ataacagcga 1021 ctctattctg gtgctttgat ttcatgttgc accataatca aaatagccaa acaaaaacaa 1081 aaaaaaaact tgcgcaattt atttagtcaa actatagaaa attccaattt tttcgcatag 1141 aggcaaggca atcccccgcc tgtgagcgcc taacaaaagt tgttcaaact taaatgcaaa 1201 gcaaataaag tgattccttt ttttgtacgt gaaaatcgac gaaaccaaag caaataacgg 1261 cgagcaacaa attgattgtt agtttaaaat aaataaatca aaaacaacaa cactaaaaac 1321 aaagaaataa atctataaaa agatttacca aataacaaaa atctaaagca acgccaaaaa 1381 cagagttgct ggcatcacaa catcgacacc agcagcaaca gccaccaaat ctactacacc 1441 gtcattatgg ggcccatagg caaattaaaa atgggccgac atacagcagc gacaatggcc 1501 agcgcattag cagcgattat atttttgaat tttgtcttaa tagcttcggc tgtcgatgaa 1561 cctagactgg aaatttttcc ctcacaaaaa gtccaaagaa aagccgtggg tcaggccatg 1621 attctaacct gtcgccctaa tgttccttca cctaatctag tagctgattt gcagtggaag 1681 gataatttaa ataatacgat attgcccaaa ccgcaccaaa tttatcaacc agtgtatgat 1741 tccaaaggac atagaatacg tgataatatg gggcgtaatc cacccatgtt cacggagtat 1801 atgaccggca cggagagttt ggcgcttatc atcaaccacc tcagtgtgga aatggagggc 1861 aaatactatt gcacagcatc ctatgcgacc aatgatatcc tggagaccag tgttacggtt 1921 aaaacttatg ttggcattac ctggacaaat gctccggaaa atcaaaaccc cattctaggt 1981 gaggactatg tggtaagatg tgaggtaaag gctgatccta atcccacaat tgattggtta 2041 agagatggtg atcagatacg ctcgagcgaa aaatatgtag tgcagaccca tggtcttttg 2101 atacgcaatg tccaggaatc tgatgatggc atctacactt gtcgtgccgc tgttgtggaa 2161 accggtgaat tggtggaacg caccattcgc gttgaagtct acagccgtcc agtgataacc 2221 tatttgccca caactttgga ggccactgaa ggtaaaccat tctcggccaa ttgcacggcc 2281 acaggtaaac ccgtaccgga aattttctgg attaaggatg ccaaccatca aaatgttgcc 2341 accgccgacc gcttcctggt gaaccctttg actggtgtct tgaatattaa ctcagtgacc 2401 caagatgact acggcacata tacatgcata gccaagaatg atgctggcgt ggcggatcaa 2461 aagacaaagc tgaatgtttt gattactccc tcgatttact atttgtacaa tgtaaccggt 2521 gtgagcgaga aagaggtggc ccttacctgt cgggccaagg gtcgtcccgc ccctgcaatt 2581 actttccgcc gttggggctc tgaggatgag tttacagccg gtgctcaagt cgatgatgaa 2641 cgcatcattt tggaacaaca ctttgacgat gataaaggtg aaagcagtgg cactttgaga 2701 atatccaaag ccatgcgctc agacgatggt ctgtatcagt gtcttgcgcg caacaccgga 2761 ggcaccgcct atagtaccgg tcacattgag gttcagttcc gtccagattt cacacacatg 2821 aaggacttgc cgccagtatt cagctgggag gagcgcaagg tgaatctcag ctgtttggcc 2881 atgagcatac ccaatgccac cattgaatgg cgctggaatg gcaagcccat caaggatata 2941 cacgacaaga acttggaaat tgtaggcacc ggtcctcgca gcgatttaat agtccatccg 3001 gtagctcgcc agtattattc cgtctacaaa tgtattgcca ccaatattca tggcaccagc 3061 gaacatgata tgcagttgaa ggaggcccgt gtacccgaac ccgttcctgc ggcacaaccc 3121 aaacagctga cagcgacaag tgttacattc gaaatacgca gtccccccac agagtttggc 3181 ctacccatta cagcgtttac agtgcaatac aaagaagcca ttaaccctga ttggtcaaca 3241 gcgttaaatc gaagttggtc acccgattcc ccctacattg ttgagggact aaaacctcag 3301 accatgtacc atttccgctt tgctgcccgc aaccaggtgg gattgggtct gtggggcgtg 3361 aatacccagc aatcaacacc taagcgttcg gcacccgaag aacctaagcc cttgcattcg 3421 cccgtgcaaa atgatattga ggaacccgtg gtggtctcac cctactccga tcactttgaa 3481 ctgagatgga gtgtgcccgc agacaatgga gaacccattg atttctatca agtcaaatat 3541 tgtccgggcg tcaaaatttc cggcacttgg catgaactgg aaaacgaatg tcaatccgta 3601 gaggtagccg aaagcacatc ctacgagatg acacacttgg ctggcaacac ctattaccgc 3661 attgaattgc gtgcccacaa catcatcggc ttctcgtcgc ccgcgtccgt cattatgaaa 3721 acaacacgag gcatcgatgt aatacaaatg gctgaaagac aagtgctttc ctcggcctca 3781 attgttggca ttgctgtggg aggcgttttg ctgttgctct tcattattga tttgttgtgc 3841 tgtgtaacca tcaatatggg cgttatggcc agcatgtgtc ggcgcactaa gagatcgcct 3901 tcggaaatcg atgaagaagc caaattggga agtggccagc tggttaagga gcccccacca 3961 tcaccgttac ctttaccgcc accagtcaaa ttaggtggat cccccatgat atcaccatca 4021 gatgaaaaac agcctttgca aacaccaacg gaaagtatga aacaaaattc aaccattgaa 4081 tttgatggta aatttgtaca ttcacgaagt ggtgaaatta ttggtaaaaa ttcagcagta 4141 taaacgatac gtgttgggtt taagcggacc taagcctaaa tgatagatgc atgcgtctgc 4201 tcatgcatac caaccaagat gacaaactgg agattagttc tgggattttg cccggaagcc 4261 gattgggaat aaatatgctt cattattaca tacaaaaata catactttct ctctatctat 4321 aaaaacaaaa acataacaga aatcatgtac aattaagtta tatataacga ctatattgtt 4381 tccatagtat aaaaccataa ttttattaac gcatgatagt catatgacat ttttccacca 4441 taagtttaaa caaatttaag tgtttttgtg caagcaagct aatggtgtaa agatggcata 4501 gtgatatgac aacaatcagg ttcgacattt aattaagttt tttttttatt tttagtcatt 4561 tcacaaaaca tatgcctcat tagttaaaat attatcattt atagtattat gcagaagaca 4621 gaaaccataa catcatcaac aattattcat tcattcattt attgccttaa ttaagatgag 4681 ttcttgcata taagtagact taatttgtgc gataagtttt aaggaagaaa ttgcatcata 4741 tttgaatagc atgcatacat gaaaataatt aaacgccatt tattcataat tttaatgcca 4801 tttttaatca tttgattttg tacagataaa acttaggggt gcaatttttg caacaatcat 4861 gcggtgtttt aatattttct tttttttatg aaatttccct ctgattataa acgacctatt 4921 aaaaatattt tttcactaat attgagtact aaataatcgt gtttaaagtt ttggtaaaat 4981 ctttaataag gcagcaaaac acatttaaac tcatttacag tttaccatga aaattaattt 5041 caatagtgta attgaaagat ttaaatctaa ttcattcaat acagcatagt gatgaataac 5101 tgaagtttaa gttattaaaa cttaagttaa tgaaatcttc attttgttga aagcccgtta 5161 ttttaacctt catatatatt ttcaccttat gatttcctga gaaattaagc actccaaccc 5221 aagcatttct agttgaattt ggagtattta agaaagtgta acactgaaaa catttcaaac 5281 tttgaatatt ttgaatttct ttattattag tgaacaatca aaaaaatttt ggttttgttt 5341 ttgcccaata acttacgatt ctactccact gcaagcgagt caaatgtgtt tagaatggca 5401 ccacctaaaa catctagatt tatttcattt atttgctcta ttatgagtga tttaaatttt 5461 tggtttagaa aaaatttcat atttattggt acttaattaa ctcaaaaaag tttcatgtat 5521 tgacaagact tatttatcgg ctcccagttt ctttttgttt tgtattaaga aaattattca 5581 ttaaatacat aataattata ctttatagtt actctaagtg taaattgtgg cttatgtgaa 5641 taaaatttca gctattaaga gagaaaggaa taaataaatt ccatatatat acattcatca 5701 gttcatacat agagacatac atataaatat atattatatt taataaatca aacgattcat 5761 gacaacaaat gaacaaataa caaaatgctc aataaaaata cttaaaattt atatacagac 5821 ccacatattt aagaaaacaa aagataagcg atgtatgcgt tttaaataat ttttttgttt 5881 taatgtttca ttaaggtttg aaaccaatac gaaggaatgc attggatttg tctcctttgg 5941 tatttgtctc ctttagggtt ttatacctcg atgaaaataa tgatgcattt ataattaaaa 6001 aaaaaatctt gagatgcaat gttctaaaaa aaccaaagaa attttagaaa tagggaataa 6061 ggaaaatgtc aagctcttat tttacataaa caaaattcaa aaaggtgacc taattctatc 6121 gccttctaat taaaatataa ttttccttaa tacattagca gtaattttac aattctcctg 6181 gattttgtac tgattgcatc tctggatttt tccctgtgtt tgtataatct gacttttatt 6241 ttttgtgcta acttgtaaaa atatctacac aataagttac cgtaaggcaa atccttacac 6301 ataggttaaa tttaacataa gtaaatgtat ttattagttc taagatttac aataaacaac 6361 aacaatttcc accattaact ataaatatac aaaaaacgta cataaaaatc tacaaaaaac 6421 aataaaacat aaaaaattcc ttaaaaatat gaagaaaaaa aaacaacatt gaatatttat 6481 tttgcatttc attcagcgtt tatccctatt ttttattaat aaagtttata ttatgttgtc 6541 ttttattaag tttgccccga accaaaaaaa aaacaaaacc cagaagacaa gcgcctttta 6601 agagcttctt aaaatcaaat gtacttatat gtaaagctat ttagcaaaat gataaaaatc 6661 acaacagaaa acaatctata aaatgaacgt ttgaacgtta aggatacatt tttgtacaaa 6721 aaaattatat aaatatacgt ttgggccatt atcatcataa tatacctaaa ttcgcttaca 6781 ttaccaaaat aaaaagagtc gtaaatttaa aaacggaaca taataaaggc gaatttcaat 6841 acagacacct taattcaaaa aaaaaaaaaa aacacaagaa aaactttatt tatacctata 6901 tacacccaac gttacaacat ggtcaccaaa aaagagatac aaacgcattt aattttttat 6961 aagttcttca taagtttaaa actgaataca aagggctaga agtgaaaacg gatgtagctt 7021 ttctatctca acataagatg tatattgtgc ttctttttcc tgagaaaata acacaataaa 7081 taaataactc ccgaatacat aac