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LOCUS XM_013259762 5424 bp mRNA linear INV 02-SEP-2023 ACCESSION XM_013259762 VERSION XM_013259762.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013259762.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5424 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5424 /gene="LOC106092834" /note="mucin-2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:106092834" CDS 746..5062 /gene="LOC106092834" /codon_start=1 /product="mucin-2" /protein_id="XP_013115216.2" /db_xref="GeneID:106092834" /translation="MSYNQKPPGSGGSGMGGAGAGGGGPPNGPNNMPQVAKTFAGIQQ QMQNLVHGQNPLPQSSQAELNAFLQQQRIQNMLKQQQQFLHFQQQMQQQQHQQQQQQQ QHHNMGGGGVGGGMPIGGVPGGGGPNAGGGGEPLALTRTPGATELLNKTYQQQANGNP AANPTFNQLQQTLQALPSNFVQQLQAFQYQMQAKQMHQQQHGAGNSQVGGHLGQQQGG LSQGVPPPATTTAMSHQQQQQQQKHHQQQQNAAATVAAVQQFQQRYLTAAAQAAVSGN KHTSAAPPPPPLTNQMKTPNLPPNTQITPVTAANIGGNVIPPSGSLPHQKGSAGPSSG GPSNKHQTSQPPPSISLTPTKPTTTAPSAAHQQNKFTPPNNAGNKNASVPPPAGHSQN VQKTYAGGAGNNAYSNTTSPAKVGSGGNVDAATGAALKSPQSTPVQLTKQMPPAANSA IVGSKIGAPPPPTATATTATATPTQKATTQSTPTSTNTSTTTTPAAPPSPQQPVVNPT TSALKTSPPPPPTITTTPTAPTVLEPKPSTSDPPTSPPKASGKDPVKSSADQNNKNTT ESNAPISATVTAPPVAVSAASDTTQKKDVVKPAEDKKVEAAAAATAVTPKPPVAAEPT KTKTSASIASESSKSYEEQKSQPEAAKSVKPENSADEVAKDGGNKSSSSDLQKQVIEK KETILEVEVKPPTTTPPETSTKTTPTTSVDKSEKSLKPEVVSEEKKSDSQKEFEKVNN DKITEAKPKAKEEKSKEVDGDKTISTNVEIAATNVDKIAEDIKPKASTEAVEATSTME KHSEKSEEPALQEAKSKSPVKEATKLVEKPVEHRLTLSSFSTEGCEAYSKTIPKEKEQ AKAPTKSTAKAESSSSTKPVSAISAVPVKPNSSDVVKGIPETSATATSSSAAVSSTPV KKQARAIKLAKVKPVTSNKTTSSESKTPEKKVEEKTTPAIVRTKRKSKSEPQAIDSAP STPKDDDSDRKSKRHRLKTILYQSPLPELAFITKLSASEASNSPKPMSNEDRLIVFYK NEYMAVRNAEGTFYLCQTMQNVYRTSPRISIRWLSEDAKDCNVYIPDFYDHTDIECVL TTVELKRIDKGHMRLPKSERTRIESILKKAIDVEKGLVPRPELTEENPDGLDISLFKD ESQIEKKSSNNADGEVGTPTGASSGRKTRKPYSSSLAKPAAQTPSSSSKSAQKRKRST GSATGNTSGTRKSPAKKRKALVKRKKKKSSDSEDDDDEESSDEFESDTEYKPTQKRTS VTASSSKTTPRAQRSPLAKARAASPITPTTSRTKNVPQKNTPTPTPTPSPSTSKATRG ERAAKRKSLADAGSSEESTPAKRPATTSTKSATKSKTNENVALEQTITVNKPNSDSET SESAQTTTSSTTTAIPNTSIPASTSITAASSNGSGGAAPSAAASMVVDDGGVNRLSRC RK" polyA_site 5424 /gene="LOC106092834" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttacatatca atgtaaaagt ataaaaacta cacaaggatg taaaatcgtg acttggttac 61 aatcatagca taaaataata aaagaaagta cagtgttaca cagtgattgt gcttgtgaag 121 aattcaagga aaaacatttt tcttcgtacg ttcgttcaca ttgatgccgc agcagtagtt 181 atgtacatat attcatatgc gtgtgtgtgt gtgttaagaa aggaatggag gagaaaccaa 241 taatgaagaa gaacgtaata atcaaacgtt attaactaga cagcaaggaa gaagaagaag 301 ataagcagca gaaggaaaag taacagaaaa ggaggaatag aagtaatgcg gtgtgctatt 361 gtgtgttgtt gcacttattc gaacatttcc aatatattga tgccgccgtg tctccagaat 421 aaataaaagt aataaactct aaacgaatct aaataattat tcgcgtcgtc agttgttgca 481 aaaccagaat aggaataaca acaataaacc acaagagagc aagacaagaa accggtaata 541 agtgagagcg tcgtcggcaa agtgaagcaa caaaaagaac gaaagaacag tgatccactt 601 aagaagtcga ttggaaaaca tagtcacaaa aagtgtgacc tttgtgtttt tgtactgtcc 661 caacgcaacc atttaaaggc ctattagaaa agcagaataa gaagaaattg gttaagaaaa 721 taaattctat ttaattaatg tcaagatgag ttacaaccag aaaccgcccg gttctggtgg 781 cagtggcatg ggtggagcag gcgcaggtgg tggcggtccg ccgaatggac caaacaatat 841 gccccaagtg gccaagacat ttgctggcat tcaacaacag atgcaaaatc tggttcatgg 901 tcagaatcct ttgccgcaat catcacaggc tgagttgaat gcatttcttc aacagcaacg 961 catacagaat atgctgaagc agcagcaaca atttctacat tttcagcaac aaatgcaaca 1021 gcagcagcat caacaacagc aacaacaaca gcaacaccac aatatgggtg gaggtggtgt 1081 tggtggtggc atgcccattg gaggagtacc tggtggtggt ggaccgaatg ctgggggtgg 1141 gggcgagccg ttagctttga ctcgaacacc tggtgccaca gaactgttga acaagaccta 1201 ccaacagcaa gcgaatggca atccggcagc taatcccact tttaatcagt tgcagcagac 1261 attacaagcg ttgccatcta actttgtgca acaattacag gccttccaat atcaaatgca 1321 agccaaacaa atgcaccaac aacagcatgg agcgggcaac tcccaggtag gtggtcacct 1381 cggacaacaa caaggagggc tatcgcaagg ggtaccgcct cccgccacaa cgacagctat 1441 gtcgcatcaa caacaacaac agcagcaaaa acatcatcaa caacaacaaa atgctgctgc 1501 gacagtggct gcagtacaac agtttcagca gcgctatttg acagctgctg cccaagcagc 1561 tgttagtggc aataaacaca cctctgctgc ccctcctccg ccgcctttaa ccaatcaaat 1621 gaaaacacca aatttgccac ccaacaccca aatcacacct gttacagcag caaacattgg 1681 tggaaatgta attccaccat ccggctcctt gcctcatcaa aagggtagtg caggaccatc 1741 ttccggcggc ccttcgaata aacatcaaac ctcccaacca ccaccatcca tatcacttac 1801 accgacaaaa ccaaccacaa cggcacccag tgctgctcat cagcagaata agtttacacc 1861 accaaacaat gctggcaata aaaatgcatc ggtcccaccg ccagcaggtc atagccaaaa 1921 tgtgcaaaaa acatatgctg gaggagcagg aaacaatgcc tacagcaata ccacaagtcc 1981 agctaaagtg ggaagtggtg gcaatgtgga tgctgctaca ggagccgctc taaaatcgcc 2041 acagtcaact ccagtacagt tgaccaaaca aatgcccccg gcagctaatt ccgcgatagt 2101 tggtagtaaa ataggggctc ctccaccccc aacggcaaca gcaaccacag ctacggcaac 2161 tccaacacag aaggcaacaa cacaatcgac acccacttct accaacacct cgacgactac 2221 cacgcctgct gccccgccgt ctccacagca gcctgtggtt aatcctacta ctagtgcttt 2281 aaaaacgtca ccaccaccac caccaacaat aaccacaact ccaacagcac ccactgtgtt 2341 agaaccaaaa ccctcaacat ccgatccgcc gacgtcgcct ccaaaagctt ccggcaaaga 2401 tccagtaaaa tcttctgcgg accaaaacaa caaaaatacc acagaatcga atgcacctat 2461 ttcggcaact gttacagctc cacctgtcgc tgtttctgct gcctcagaca caacccaaaa 2521 aaaggatgtg gtcaaaccag ctgaagataa gaaggttgag gctgcggcag cggcaacggc 2581 ggtgactcca aagccaccgg tcgccgctga gccaacaaaa accaaaacta gtgcatcaat 2641 tgcctctgaa tcctcaaaat cgtatgaaga acaaaaatcg caaccagaag ctgcaaaatc 2701 agtaaaaccg gaaaacagcg cagatgaagt ggctaaggat ggaggcaata aaagctcttc 2761 aagtgaccta cagaagcaag tgattgaaaa gaaggaaact attctcgagg ttgaagtgaa 2821 acctccaaca acaacaccac cagaaacctc tacaaaaact actcccacaa caagtgtgga 2881 taagtcagaa aaatcattga aacccgaagt tgtgtctgaa gaaaagaaat ccgatagtca 2941 aaaggaattt gaaaaggtca ataatgataa aatcacggag gccaagccga aagctaaaga 3001 agagaagagc aaggaagtag atggcgacaa aacgataagc acgaatgttg agatcgcagc 3061 gaccaatgtt gataaaatcg cagaagacat aaaacccaag gctagtacag aagcagttga 3121 ggcaacttcg acaatggaaa agcactctga aaagtctgaa gaaccagcct tgcaggaagc 3181 aaagagcaaa tcgccagtta aggaggcgac gaagcttgtg gagaaaccag tagaacacag 3241 actcactttg tcatcattta gcacggaggg atgtgaggct tattctaaaa ctattccaaa 3301 ggaaaaggaa caagcgaagg cacccacaaa gtccactgcg aaggcagaga gttcaagctc 3361 cacgaaaccc gtctctgcta tctctgctgt ccctgtcaaa ccaaattcta gtgatgtggt 3421 caaaggaata cccgagactt ctgctacagc cacttcatca tcagcggctg tttcctctac 3481 accagttaaa aagcaagcgc gtgccattaa gttggctaaa gttaagcctg ttaccagtaa 3541 taaaacgact tcaagcgaaa gcaaaacgcc cgaaaaaaag gttgaagaaa agacgacacc 3601 tgctatcgta cggacaaagc gtaaatccaa atctgaacca caagctatcg attctgcccc 3661 atcgacacca aaagatgatg attctgaccg caaatcgaaa cgccaccgcc tcaagacgat 3721 tctttaccaa agtcctctgc ccgagttggc cttcatcacc aaactatcgg ctagtgaggc 3781 ttccaactcg cctaagccca tgtcgaatga agatcgcttg atcgttttct acaaaaacga 3841 atacatggca gtacgcaatg ccgaaggtac attctatttg tgccagacca tgcaaaatgt 3901 ttatcgtacc tcgccgcgta tcagtatccg ttggctttca gaggacgcca aggattgcaa 3961 tgtgtacata cccgatttct atgaccacac tgatatcgaa tgtgttctaa caacggtgga 4021 gctaaagcga attgataagg gccacatgcg tttgccaaaa tcggagcgaa cgcgcattga 4081 aagtatactc aaaaaagcta ttgatgtgga aaaaggattg gtaccaagac cagaattaac 4141 ggaggaaaat ccagatggac ttgatatttc gctattcaaa gatgaatctc agatcgaaaa 4201 gaaatcttca aacaacgctg atggagaggt tggaactcca actggggcct cgtccggtag 4261 aaaaacgcgg aaaccatact cttcatcgct agcgaaacct gcagcacaaa cgccatcatc 4321 atcatccaaa tcagcacaaa agcgcaagcg cagtactggt tcagcgaccg gaaatacttc 4381 aggcactcgt aaatctcccg ctaaaaaacg aaaagcgttg gttaagcgca agaagaagaa 4441 gtcgagcgat agcgaggacg acgatgacga ggagtcttcg gatgaattcg agtcagacac 4501 ggaatataag ccaacacaaa agcgaacatc agtcaccgct agttcgtcga aaacaacgcc 4561 tcgtgcacaa agatcacctc tggccaaagc cagagctgca tcacccataa ctcccacaac 4621 atccagaact aaaaatgtac ctcaaaagaa cacacccacg cccacaccca caccttcacc 4681 gtctacatca aaggctacac gcggcgagag agctgctaaa aggaaatctc tagcagatgc 4741 cggatcgtca gaagaatcaa caccagccaa aagaccagca acaacctcaa caaaatcagc 4801 cactaaatct aagacaaatg aaaatgttgc actggagcaa actattactg taaacaaacc 4861 caacagcgat agtgaaactt cagaatcagc ccaaacaact acatcatcaa caacaacagc 4921 aataccgaac acctcaatac ctgcctccac atcaataact gctgctagta gcaatggcag 4981 tggaggtgct gctccttccg cggctgcctc catggtggtc gatgatggtg gtgttaatcg 5041 actttcacga tgtcgaaaat agatttaaat gcagaggcat ggcatgcatt catcaacaca 5101 caataaacaa cgttttcttt tttatctaca atgtacgact tactacttaa ctgaagagaa 5161 tagaaaaaca aaaacaaaaa acgtgtaagg ttaactctct taggtttagt tgatattctt 5221 aagtttctgc cgatgtatat ttactaagac ctaatccttt tcttgctccc actataacta 5281 taacaataac aacaacaacc acaaccacaa atagaaacga aaccccaaac acagaattga 5341 ccttatgact tatttctcca tttcctcctt ttttacgaag tactttataa ttattgcaaa 5401 aacaaaaaca aaacaaaaaa taaa