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LOCUS XM_013259707 7577 bp mRNA linear INV 02-SEP-2023 transcript variant X2, mRNA. ACCESSION XM_013259707 VERSION XM_013259707.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013259707.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7577 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..7577 /gene="LOC106092772" /note="protein ROP; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:106092772" CDS 207..2009 /gene="LOC106092772" /codon_start=1 /product="protein ROP isoform X1" /protein_id="XP_013115161.1" /db_xref="GeneID:106092772" /translation="MALKMLVGQKIMNEVVKYKPPPPKKGGTAAAAAASKANMDWRVL VVDKLGMRMVSACTKMHEISAEGITLVEDINKKREPLPSMDAIYLITPSQDSVAGLIR DFENPARPMYRYAHVFFTEAVPDSIFEMIKAEKHLVNHITCFREINIAFLALESQVYS LDSPDSFQCLYSPAFASIRAKHLERIAEQIATLCATLGEYPMVRYRTDWDRNIDLAAV VQQKLDAYKADEPTMGEGSEKARSQLLILDRGFDCVSPLLHELTLQAMAYDLLPITND VYRFTPGPNQPEKEVLLDENDDLWVELRHQHIAVVSTQVTQNLKKFTDSKRMSSTDKA SMRDLSQMIKKMPQYQKELSKYSTHLHLAEDCMKSYQNYVDKLCRVEQDLAMGTDAEG EKIKDHMRNIVPILLDANVSNFDKVRIIALYVMIKNGITEENLTKLFTHAQLSPKDQD MVRNLSHLGINVIADSRKKTYSVPRKERITEHTYQMSRWTPVVKDIMEDCIEDKLDQR HFAFLTGRAQNPNYHAPTSARYGHWHKDKTQTQVKNVPRLIVFIVGGVCMSEMRSAYE VTNAVKNWEVVIGSSHILTPENFLSDLGSLTKED" misc_feature 330..1982 /gene="LOC106092772" /note="Sec1 family; Region: Sec1; pfam00995" /db_xref="CDD:460020" polyA_site 7577 /gene="LOC106092772" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgacaataca gctccagtta tgtggggatt tttggagaaa atacagtgaa tagttcagat 61 ctgcgaaaaa aattaacgaa cgggggttca taattttttg tgtgacggaa cagtttttaa 121 cagatctaga tcgtggccag gccagtaaaa atccgtaact caaaaataac tgaaagaaaa 181 agtgaaaaac ttaaacaaac tgcaaaatgg ctttgaaaat gttggttgga caaaaaatta 241 tgaacgaggt ggtaaaatac aaaccgccac ctcccaaaaa aggaggcaca gctgccgctg 301 cagctgcttc taaagcaaat atggattggc gtgtgctggt tgtcgataag ttgggcatgc 361 gaatggtatc agcatgcaca aaaatgcatg aaataagtgc tgagggcatt acattggtgg 421 aggacatcaa taagaaacgt gaacctttgc cctctatgga tgctatttat ttgataacac 481 catcacaaga ttcggtggct gggttgattc gtgactttga gaatccagct cgtcccatgt 541 atcgctatgc ccatgtattc ttcaccgagg ccgtgcccga cagtatattc gaaatgataa 601 aagccgaaaa gcacttagtc aatcacatta catgtttcag agagatcaat attgcatttc 661 ttgcccttga aagtcaggtc tactcgctcg attcgccaga cagttttcag tgtttgtact 721 caccggcatt cgcctcgata cgcgccaaac acctcgagcg cattgccgag cagatagcca 781 cgttgtgtgc tacgctcggc gagtatccga tggtgcgata tcgcactgat tgggatcgca 841 acatcgactt agctgcagtc gttcagcaaa aactggatgc gtacaaggct gatgagccaa 901 cgatgggcga gggttcggag aaagcacgtt cacaattgtt aattttggat cgtggttttg 961 attgcgtatc gcccttgttg cacgaattaa cactacaagc catggcctat gatttgttgc 1021 ccatcaccaa tgatgtctat cgcttcacgc ccggacccaa tcagccggaa aaggaggtgt 1081 tgttggacga gaacgatgac ttgtgggttg aattgcgcca tcaacatatt gctgtcgtgt 1141 ccacgcaggt tactcagaat ttgaaaaaat tcaccgattc caagcgaatg tcttctactg 1201 ataaggcatc catgcgcgat ctctcacaaa tgattaagaa aatgcctcaa tatcagaagg 1261 aattatccaa gtattccacc cacttgcatt tggccgaaga ttgcatgaaa tcctaccaga 1321 actatgtcga taagctgtgc cgcgtcgaac aagatttagc catgggcacc gatgctgaag 1381 gtgaaaagat taaagatcat atgcgaaata ttgtaccgat tcttttggat gccaatgttt 1441 ccaatttcga taaggtgcgc atcattgctt tgtatgtcat gatcaagaat ggcattactg 1501 aggaaaatct cacaaaactc tttacgcatg ctcaactttc gcctaaagat caagatatgg 1561 ttcgcaattt aagccatttg ggtattaatg ttattgctga ttcacgcaaa aaaacttatt 1621 cggttccgcg caaggaacgc attaccgaac acacttatca aatgtctcgt tggacacccg 1681 ttgtaaaaga tatcatggag gattgcattg aagataaatt ggatcaacgt cattttgctt 1741 tcctgactgg cagggcccag aatcccaact atcatgcccc cacaagtgcc cggtatggcc 1801 attggcacaa agataaaacc cagacacagg ttaagaatgt tccacgtctc attgtcttca 1861 ttgtcggtgg tgtatgcatg tccgaaatgc gcagtgctta tgaagtgacc aacgccgtca 1921 aaaattggga agttgttatt ggctcatccc atatactaac acctgaaaat ttcttaagcg 1981 atttgggctc cctcaccaaa gaggactaaa cgcgtctatc ctcctgtata actaaaacat 2041 tgtatgtgtt taaaaaaaca acaacaacaa ctataacaac cacaactaaa ggaaacgaaa 2101 catgtgttta cactaacaaa tctttatata attatatatg caatttaaaa agatgttgaa 2161 atttaagatt tagcgaaaaa aacaagtgta gtgaacaaaa aaccagcgca atagctaata 2221 ataagatgga tattgaaaga caacacttca aaaatgtatg gcgtttagta ggattccata 2281 gaccactctt tttttctcgt tctaattttt aaacataatc aacaaaaatt ataaaattac 2341 attttgaaca ttacttgcat ccttttgaaa taaaagagaa agtacatttt cataacgaaa 2401 aataaaactt aaaaaaagaa taatgatacc aattttgaag aaaaatagtt atgcaatgtt 2461 aaagatctag aagatacatg cagaaaaata agagctgatg gctggcagcc catagctgta 2521 ctatgcctgc tggtctaggg gctcatattc cattcgagcc cagtatagaa taatgtttga 2581 ggttttatgg cgttattaag ctttatctga ttataacgaa ttaaatgtgt ttttgtattt 2641 aaataaaatg tgtattttag tatagtttac acaactctat atatataaat atatgaaaaa 2701 acaacaaaac tatattcaag aaagacaaaa aataaataaa ttaaacataa ttaacacttc 2761 taactatacg aattcgtata taaactctct cttctcttta aaatttattg aaaataaaaa 2821 ccaaaactaa aaatgttaca acacacacaa cacatcatca tagaattttc taaaagcgat 2881 tgaagaatct agaaaattat gaaaaaagta gaaaaattag gtttttcaaa gtttttccct 2941 taacaaataa ttaaaaaaca catgttaatt taaaacctgt gacaaatgtg ataagagaac 3001 agtaacataa ttgaaattag atatcatatt tggagatttc aaagcttttt tgaattcctc 3061 aaacgttttt tcccaaaatg gtcatttgca gtgcattgtt caactgccga agggcccttt 3121 tattattgat gaatctccat gatagtgtaa acaacaacaa caacgatagc taaattcatg 3181 aatgattatt gattttctgc aaaaatcctc atatgaacaa cacaaaaatt cttttcttct 3241 gaggtataag ttgaaagtga gtgcagattt ataccaattt cctgtagatt ttaaaaagtt 3301 ttcaagcttt tgtgtcattt cggaaaacgt tttttctaaa aactgtccaa aaatgttttc 3361 tactgacttt gaaaatatta tagcatgcac cttttgtatg tatgctggtt cccgcaaaca 3421 cagttaccag ttgttatcaa attgtgattc atttttatat cttgcttaga ttttttataa 3481 tacattatag tcttcttaca ccatgcatac attttatgca tctcctttaa atctttttac 3541 caacatccta aatgtatagg agtaatatat gattttccaa aaccagcgag ttcttaaatt 3601 attttattta gtcaaagaca aatggtaata agcactttcc aatgaaccat tgtaataaaa 3661 acagaaacta aaaaaattca tgttcatcct attctccagg tgatatgcta aagtcaaagc 3721 cctaactgct atgtaaacaa aaataatata taaaaatttt agcaatttgc ccatataacg 3781 tcgaatatcg aaagggatga agaaacatga aacatttctt agatttaagt aaaagaagaa 3841 gcaagaaaat aacagcaaaa ttttgaagcc acaacaaata tgtatttgaa acaagtcctc 3901 ttagcggcta attaagcaaa agaggaccca gattgagaaa aaaattaaac aatataataa 3961 caaacattta aaaatatata aaaattatta atcaaaataa atgtctttaa acttataaca 4021 caaaacatat tatttaaaaa agacaaacaa taagtatttt atttttattc gataacattt 4081 cccgtattta tgaagcaaaa gaaaaaaaac aaaaattaag gggcagtaga gcagttccga 4141 taacattctt ggtgcagtct gctgccacct tcaggaaaat ccattgcatc ttatatacac 4201 acatatgcaa tatttatttc agcagtaaat aattggtcgt ggaaccttga gcacaattaa 4261 agcaacatat ctatcaacaa ctggatatgc tatcatggta ttccgcaaaa aaaaaaaaaa 4321 catttaataa cacaatataa tgataaatgt atttcaaaaa tatttgcatg ctattccaca 4381 aacaattatt cttattatta tgcatacaac aacaaaaatc taagtatata acaaaaaaat 4441 tttcaaattt taaacgatta tcctgtttca caacataaac gtatgaatga aggcacggct 4501 aatcgtttat tatatggtaa cgcatatata ttgaaaacaa aattatttaa tgttcaatca 4561 cacatattat ataaaaatat atatttaaac aaagaatcta aagatgtatt cgtatcccag 4621 cccatcctta tcaaatccga taaaacccac ataccactta gagaacaact ctctcctcga 4681 agacgatcca cgacaatcgt tcttccatct ttcgctaggt agagttgtta gagactgcta 4741 aaccgttata agaggacctt aagacaatga attgaacatg tttcgcaaca cttctatgtt 4801 atctagggcc ctcattctgg ttttaggttt taacgaaatc gcaatttatt cccaaacaaa 4861 tattacaacc acatccttat aataaaccat ataattaaac aattgaaatt acgaaaggtt 4921 tattgaaaat aatataaatg gagcagatta gttttaagcg ctgcaacagc ataattaacc 4981 ataaataaca tgcatcgttc tggtaatcta aactatgggg acatttttag aagcagagtt 5041 tcgaattgga gttttttgta gaaaggcaaa ggaggcaata tgaggccact ccatcgttca 5101 ttatggaaaa ttaaatgagc gcccttaatg ttcttagggt gataagggat atatatcttg 5161 ccaacaacct ttaaagtacg acaaatcttg ctagcacttt actatccaag gaaaatgatg 5221 aaaccaacct aaaactttcc acatgaagaa acctgagtaa aatgtactca acggcactaa 5281 tcggacataa aaatagcagc cagtagtgcc aacacgcaaa atgtaagact tttcacttcc 5341 ttataaatca tcaatttggt tatgatacta atcaatttct gtttaagaac atcatgttat 5401 aaacccattt gccaaccaaa gcaaggcaaa ttaatattta tgaagccaat cttatcgcct 5461 ttaatgttct tagggtgata agggatatat atattgccaa caccctttaa agtacggcaa 5521 atgttactag ccgtatacaa ggacaatggt ttaaacagga tgaagctaac ccaaaacttt 5581 ccacatgaag aagcctcagt aaaatgtact aaacggcact aattcgatat aaaaacagca 5641 gccaatagtg tcaacaggca aaatgtaaga cttttgacct aatcaatttc tgtttaagca 5701 catcacgtta tgaacccatt tgtcaaccaa agcaaggcat attaatattt atgaaaccaa 5761 tctcagaggt ttgttgaaat ttgaatcaaa gtttgagaag cataggaaat gatctgtaat 5821 tagcatgcct aaatatttgg ttcactatcc gctaaacaat tagttacgac atatactatt 5881 gaaagtatta aggaaaagtt ttaaccacta ggcaaatatc ttaggaaacg tatgctttta 5941 cagctgattt tgtgtaaaca tcgcctagtt ttagattttt ctcatctggc attcgccttt 6001 aaggctatgg ctatgatgcc gctgtaaaac tcgcaaatca tttgacgcta cacatgtaag 6061 ttaacaacca aatccaaatt tctagtttga ataagaatta ccaataaaaa gtatttaaat 6121 taataattaa atgcacaaaa aaaactaaat acagatatat catcggagta atgttatcct 6181 gttccatacg ccattttcga gttctttgag ttggcatcag tttttgtgac tttaaagcac 6241 tctatatatc taaaataata ttgaggtgta aatatggccc atttcattgc atactgcaag 6301 tgcgtttatc tcaaaatcaa taaattggcg tttggagcaa aattacatta caacgacgat 6361 atgtatttct ggctcaaggg ttttcgtgtt agttataatt tctattcaag ttataaaaca 6421 aatgttggac tcagttttct gtgctctaga aatatcccca agctaggatg ttgtcaagat 6481 ttttcatgca catcaaaggt gattttggca tgtctagtct ccgagaaaag ggcgcatgcg 6541 tagtgataag atttatgttc ttgtatttca cacgtatcac ttataaaaat aataaacatt 6601 taaattgaaa ttaattaaaa tactcccaaa aaaaccactt ataaacaaag aagaaaaaaa 6661 caagcttagt tgtagaacca ttaaaaatta ccatactggc aagttaaaga attgttacaa 6721 aataatttat ggcctataag gctggtattt gaaaggtctt aatataactc gtaaaaacac 6781 aaaaacacat atagaaccag gagaagaaaa aagaacaaca accaaaaata gcaagatgaa 6841 ataaatggaa atagcttttg agtatattaa ataactatga tcaaacaaca gcaaaccgca 6901 ttattaatga gtaataatga cggctctagt ttgtaggaac aagacataaa cacaattcgt 6961 attgagatct gtattaacca acaatatgaa gaatttcccc gccagacttg gggtggtctg 7021 ccgcatcaaa tgccgaccga ctgccctccg ccaccaaaat gcggtgtagg agttattctg 7081 gaagctaatc aatatcaatg aagaacatct cttgcagcag cccttgggag gacctactgc 7141 gcaaggttca attaaagtct cgggcattta cttcattatt tttactctaa aatattgttt 7201 tttatttcct aatatttact tactaacaca acaaataata cacttttatt attacatatt 7261 atatgactaa ctaacaagaa aaatcgttta ttattaaaaa aaaaaaataa ctatatttat 7321 tagtatatga aatttgcaat ttttttgaaa taacaattaa aagaattttt tgaaatgaaa 7381 gagagaatat attattatta atgtctattg taataatccg aacaattatt gcttacaaaa 7441 acataaacat atataagagt atcaatatta tcccccttag tgtgtaagaa cagaataaat 7501 gttgttgtat aaccaacaac atatttcaac aaaaacaaaa aatacaacat aataagaaat 7561 atataatcaa caactaa