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LOCUS XM_013259701 7647 bp mRNA linear INV 02-SEP-2023 transcript variant X1, mRNA. ACCESSION XM_013259701 VERSION XM_013259701.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013259701.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7647 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..7647 /gene="LOC106092772" /note="protein ROP; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:106092772" CDS 207..2009 /gene="LOC106092772" /codon_start=1 /product="protein ROP isoform X1" /protein_id="XP_013115155.1" /db_xref="GeneID:106092772" /translation="MALKMLVGQKIMNEVVKYKPPPPKKGGTAAAAAASKANMDWRVL VVDKLGMRMVSACTKMHEISAEGITLVEDINKKREPLPSMDAIYLITPSQDSVAGLIR DFENPARPMYRYAHVFFTEAVPDSIFEMIKAEKHLVNHITCFREINIAFLALESQVYS LDSPDSFQCLYSPAFASIRAKHLERIAEQIATLCATLGEYPMVRYRTDWDRNIDLAAV VQQKLDAYKADEPTMGEGSEKARSQLLILDRGFDCVSPLLHELTLQAMAYDLLPITND VYRFTPGPNQPEKEVLLDENDDLWVELRHQHIAVVSTQVTQNLKKFTDSKRMSSTDKA SMRDLSQMIKKMPQYQKELSKYSTHLHLAEDCMKSYQNYVDKLCRVEQDLAMGTDAEG EKIKDHMRNIVPILLDANVSNFDKVRIIALYVMIKNGITEENLTKLFTHAQLSPKDQD MVRNLSHLGINVIADSRKKTYSVPRKERITEHTYQMSRWTPVVKDIMEDCIEDKLDQR HFAFLTGRAQNPNYHAPTSARYGHWHKDKTQTQVKNVPRLIVFIVGGVCMSEMRSAYE VTNAVKNWEVVIGSSHILTPENFLSDLGSLTKED" misc_feature 330..1982 /gene="LOC106092772" /note="Sec1 family; Region: Sec1; pfam00995" /db_xref="CDD:460020" polyA_site 7647 /gene="LOC106092772" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgacaataca gctccagtta tgtggggatt tttggagaaa atacagtgaa tagttcagat 61 ctgcgaaaaa aattaacgaa cgggggttca taattttttg tgtgacggaa cagtttttaa 121 cagatctaga tcgtggccag gccagtaaaa atccgtaact caaaaataac tgaaagaaaa 181 agtgaaaaac ttaaacaaac tgcaaaatgg ctttgaaaat gttggttgga caaaaaatta 241 tgaacgaggt ggtaaaatac aaaccgccac ctcccaaaaa aggaggcaca gctgccgctg 301 cagctgcttc taaagcaaat atggattggc gtgtgctggt tgtcgataag ttgggcatgc 361 gaatggtatc agcatgcaca aaaatgcatg aaataagtgc tgagggcatt acattggtgg 421 aggacatcaa taagaaacgt gaacctttgc cctctatgga tgctatttat ttgataacac 481 catcacaaga ttcggtggct gggttgattc gtgactttga gaatccagct cgtcccatgt 541 atcgctatgc ccatgtattc ttcaccgagg ccgtgcccga cagtatattc gaaatgataa 601 aagccgaaaa gcacttagtc aatcacatta catgtttcag agagatcaat attgcatttc 661 ttgcccttga aagtcaggtc tactcgctcg attcgccaga cagttttcag tgtttgtact 721 caccggcatt cgcctcgata cgcgccaaac acctcgagcg cattgccgag cagatagcca 781 cgttgtgtgc tacgctcggc gagtatccga tggtgcgata tcgcactgat tgggatcgca 841 acatcgactt agctgcagtc gttcagcaaa aactggatgc gtacaaggct gatgagccaa 901 cgatgggcga gggttcggag aaagcacgtt cacaattgtt aattttggat cgtggttttg 961 attgcgtatc gcccttgttg cacgaattaa cactacaagc catggcctat gatttgttgc 1021 ccatcaccaa tgatgtctat cgcttcacgc ccggacccaa tcagccggaa aaggaggtgt 1081 tgttggacga gaacgatgac ttgtgggttg aattgcgcca tcaacatatt gctgtcgtgt 1141 ccacgcaggt tactcagaat ttgaaaaaat tcaccgattc caagcgaatg tcttctactg 1201 ataaggcatc catgcgcgat ctctcacaaa tgattaagaa aatgcctcaa tatcagaagg 1261 aattatccaa gtattccacc cacttgcatt tggccgaaga ttgcatgaaa tcctaccaga 1321 actatgtcga taagctgtgc cgcgtcgaac aagatttagc catgggcacc gatgctgaag 1381 gtgaaaagat taaagatcat atgcgaaata ttgtaccgat tcttttggat gccaatgttt 1441 ccaatttcga taaggtgcgc atcattgctt tgtatgtcat gatcaagaat ggcattactg 1501 aggaaaatct cacaaaactc tttacgcatg ctcaactttc gcctaaagat caagatatgg 1561 ttcgcaattt aagccatttg ggtattaatg ttattgctga ttcacgcaaa aaaacttatt 1621 cggttccgcg caaggaacgc attaccgaac acacttatca aatgtctcgt tggacacccg 1681 ttgtaaaaga tatcatggag gattgcattg aagataaatt ggatcaacgt cattttgctt 1741 tcctgactgg cagggcccag aatcccaact atcatgcccc cacaagtgcc cggtatggcc 1801 attggcacaa agataaaacc cagacacagg ttaagaatgt tccacgtctc attgtcttca 1861 ttgtcggtgg tgtatgcatg tccgaaatgc gcagtgctta tgaagtgacc aacgccgtca 1921 aaaattggga agttgttatt ggctcatccc atatactaac acctgaaaat ttcttaagcg 1981 atttgggctc cctcaccaaa gaggactaaa cgcgtctatc ctcctgtata actaaaacat 2041 tgtatgtgta tgtagtattt gagtatttga tgcttaacac ttattacaat agtaaattat 2101 tacaatattt atgataggtt taaaaaaaca acaacaacaa ctataacaac cacaactaaa 2161 ggaaacgaaa catgtgttta cactaacaaa tctttatata attatatatg caatttaaaa 2221 agatgttgaa atttaagatt tagcgaaaaa aacaagtgta gtgaacaaaa aaccagcgca 2281 atagctaata ataagatgga tattgaaaga caacacttca aaaatgtatg gcgtttagta 2341 ggattccata gaccactctt tttttctcgt tctaattttt aaacataatc aacaaaaatt 2401 ataaaattac attttgaaca ttacttgcat ccttttgaaa taaaagagaa agtacatttt 2461 cataacgaaa aataaaactt aaaaaaagaa taatgatacc aattttgaag aaaaatagtt 2521 atgcaatgtt aaagatctag aagatacatg cagaaaaata agagctgatg gctggcagcc 2581 catagctgta ctatgcctgc tggtctaggg gctcatattc cattcgagcc cagtatagaa 2641 taatgtttga ggttttatgg cgttattaag ctttatctga ttataacgaa ttaaatgtgt 2701 ttttgtattt aaataaaatg tgtattttag tatagtttac acaactctat atatataaat 2761 atatgaaaaa acaacaaaac tatattcaag aaagacaaaa aataaataaa ttaaacataa 2821 ttaacacttc taactatacg aattcgtata taaactctct cttctcttta aaatttattg 2881 aaaataaaaa ccaaaactaa aaatgttaca acacacacaa cacatcatca tagaattttc 2941 taaaagcgat tgaagaatct agaaaattat gaaaaaagta gaaaaattag gtttttcaaa 3001 gtttttccct taacaaataa ttaaaaaaca catgttaatt taaaacctgt gacaaatgtg 3061 ataagagaac agtaacataa ttgaaattag atatcatatt tggagatttc aaagcttttt 3121 tgaattcctc aaacgttttt tcccaaaatg gtcatttgca gtgcattgtt caactgccga 3181 agggcccttt tattattgat gaatctccat gatagtgtaa acaacaacaa caacgatagc 3241 taaattcatg aatgattatt gattttctgc aaaaatcctc atatgaacaa cacaaaaatt 3301 cttttcttct gaggtataag ttgaaagtga gtgcagattt ataccaattt cctgtagatt 3361 ttaaaaagtt ttcaagcttt tgtgtcattt cggaaaacgt tttttctaaa aactgtccaa 3421 aaatgttttc tactgacttt gaaaatatta tagcatgcac cttttgtatg tatgctggtt 3481 cccgcaaaca cagttaccag ttgttatcaa attgtgattc atttttatat cttgcttaga 3541 ttttttataa tacattatag tcttcttaca ccatgcatac attttatgca tctcctttaa 3601 atctttttac caacatccta aatgtatagg agtaatatat gattttccaa aaccagcgag 3661 ttcttaaatt attttattta gtcaaagaca aatggtaata agcactttcc aatgaaccat 3721 tgtaataaaa acagaaacta aaaaaattca tgttcatcct attctccagg tgatatgcta 3781 aagtcaaagc cctaactgct atgtaaacaa aaataatata taaaaatttt agcaatttgc 3841 ccatataacg tcgaatatcg aaagggatga agaaacatga aacatttctt agatttaagt 3901 aaaagaagaa gcaagaaaat aacagcaaaa ttttgaagcc acaacaaata tgtatttgaa 3961 acaagtcctc ttagcggcta attaagcaaa agaggaccca gattgagaaa aaaattaaac 4021 aatataataa caaacattta aaaatatata aaaattatta atcaaaataa atgtctttaa 4081 acttataaca caaaacatat tatttaaaaa agacaaacaa taagtatttt atttttattc 4141 gataacattt cccgtattta tgaagcaaaa gaaaaaaaac aaaaattaag gggcagtaga 4201 gcagttccga taacattctt ggtgcagtct gctgccacct tcaggaaaat ccattgcatc 4261 ttatatacac acatatgcaa tatttatttc agcagtaaat aattggtcgt ggaaccttga 4321 gcacaattaa agcaacatat ctatcaacaa ctggatatgc tatcatggta ttccgcaaaa 4381 aaaaaaaaaa catttaataa cacaatataa tgataaatgt atttcaaaaa tatttgcatg 4441 ctattccaca aacaattatt cttattatta tgcatacaac aacaaaaatc taagtatata 4501 acaaaaaaat tttcaaattt taaacgatta tcctgtttca caacataaac gtatgaatga 4561 aggcacggct aatcgtttat tatatggtaa cgcatatata ttgaaaacaa aattatttaa 4621 tgttcaatca cacatattat ataaaaatat atatttaaac aaagaatcta aagatgtatt 4681 cgtatcccag cccatcctta tcaaatccga taaaacccac ataccactta gagaacaact 4741 ctctcctcga agacgatcca cgacaatcgt tcttccatct ttcgctaggt agagttgtta 4801 gagactgcta aaccgttata agaggacctt aagacaatga attgaacatg tttcgcaaca 4861 cttctatgtt atctagggcc ctcattctgg ttttaggttt taacgaaatc gcaatttatt 4921 cccaaacaaa tattacaacc acatccttat aataaaccat ataattaaac aattgaaatt 4981 acgaaaggtt tattgaaaat aatataaatg gagcagatta gttttaagcg ctgcaacagc 5041 ataattaacc ataaataaca tgcatcgttc tggtaatcta aactatgggg acatttttag 5101 aagcagagtt tcgaattgga gttttttgta gaaaggcaaa ggaggcaata tgaggccact 5161 ccatcgttca ttatggaaaa ttaaatgagc gcccttaatg ttcttagggt gataagggat 5221 atatatcttg ccaacaacct ttaaagtacg acaaatcttg ctagcacttt actatccaag 5281 gaaaatgatg aaaccaacct aaaactttcc acatgaagaa acctgagtaa aatgtactca 5341 acggcactaa tcggacataa aaatagcagc cagtagtgcc aacacgcaaa atgtaagact 5401 tttcacttcc ttataaatca tcaatttggt tatgatacta atcaatttct gtttaagaac 5461 atcatgttat aaacccattt gccaaccaaa gcaaggcaaa ttaatattta tgaagccaat 5521 cttatcgcct ttaatgttct tagggtgata agggatatat atattgccaa caccctttaa 5581 agtacggcaa atgttactag ccgtatacaa ggacaatggt ttaaacagga tgaagctaac 5641 ccaaaacttt ccacatgaag aagcctcagt aaaatgtact aaacggcact aattcgatat 5701 aaaaacagca gccaatagtg tcaacaggca aaatgtaaga cttttgacct aatcaatttc 5761 tgtttaagca catcacgtta tgaacccatt tgtcaaccaa agcaaggcat attaatattt 5821 atgaaaccaa tctcagaggt ttgttgaaat ttgaatcaaa gtttgagaag cataggaaat 5881 gatctgtaat tagcatgcct aaatatttgg ttcactatcc gctaaacaat tagttacgac 5941 atatactatt gaaagtatta aggaaaagtt ttaaccacta ggcaaatatc ttaggaaacg 6001 tatgctttta cagctgattt tgtgtaaaca tcgcctagtt ttagattttt ctcatctggc 6061 attcgccttt aaggctatgg ctatgatgcc gctgtaaaac tcgcaaatca tttgacgcta 6121 cacatgtaag ttaacaacca aatccaaatt tctagtttga ataagaatta ccaataaaaa 6181 gtatttaaat taataattaa atgcacaaaa aaaactaaat acagatatat catcggagta 6241 atgttatcct gttccatacg ccattttcga gttctttgag ttggcatcag tttttgtgac 6301 tttaaagcac tctatatatc taaaataata ttgaggtgta aatatggccc atttcattgc 6361 atactgcaag tgcgtttatc tcaaaatcaa taaattggcg tttggagcaa aattacatta 6421 caacgacgat atgtatttct ggctcaaggg ttttcgtgtt agttataatt tctattcaag 6481 ttataaaaca aatgttggac tcagttttct gtgctctaga aatatcccca agctaggatg 6541 ttgtcaagat ttttcatgca catcaaaggt gattttggca tgtctagtct ccgagaaaag 6601 ggcgcatgcg tagtgataag atttatgttc ttgtatttca cacgtatcac ttataaaaat 6661 aataaacatt taaattgaaa ttaattaaaa tactcccaaa aaaaccactt ataaacaaag 6721 aagaaaaaaa caagcttagt tgtagaacca ttaaaaatta ccatactggc aagttaaaga 6781 attgttacaa aataatttat ggcctataag gctggtattt gaaaggtctt aatataactc 6841 gtaaaaacac aaaaacacat atagaaccag gagaagaaaa aagaacaaca accaaaaata 6901 gcaagatgaa ataaatggaa atagcttttg agtatattaa ataactatga tcaaacaaca 6961 gcaaaccgca ttattaatga gtaataatga cggctctagt ttgtaggaac aagacataaa 7021 cacaattcgt attgagatct gtattaacca acaatatgaa gaatttcccc gccagacttg 7081 gggtggtctg ccgcatcaaa tgccgaccga ctgccctccg ccaccaaaat gcggtgtagg 7141 agttattctg gaagctaatc aatatcaatg aagaacatct cttgcagcag cccttgggag 7201 gacctactgc gcaaggttca attaaagtct cgggcattta cttcattatt tttactctaa 7261 aatattgttt tttatttcct aatatttact tactaacaca acaaataata cacttttatt 7321 attacatatt atatgactaa ctaacaagaa aaatcgttta ttattaaaaa aaaaaaataa 7381 ctatatttat tagtatatga aatttgcaat ttttttgaaa taacaattaa aagaattttt 7441 tgaaatgaaa gagagaatat attattatta atgtctattg taataatccg aacaattatt 7501 gcttacaaaa acataaacat atataagagt atcaatatta tcccccttag tgtgtaagaa 7561 cagaataaat gttgttgtat aaccaacaac atatttcaac aaaaacaaaa aatacaacat 7621 aataagaaat atataatcaa caactaa