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LOCUS XM_013259492 912 bp mRNA linear INV 02-SEP-2023 (LOC106092600), mRNA. ACCESSION XM_013259492 VERSION XM_013259492.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013259492.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..912 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..912 /gene="LOC106092600" /note="small ubiquitin-related modifier 2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins" /db_xref="GeneID:106092600" CDS 199..474 /gene="LOC106092600" /codon_start=1 /product="small ubiquitin-related modifier 2" /protein_id="XP_013114946.1" /db_xref="GeneID:106092600" /translation="MADEKKGSETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCD RAGLSMQVVRFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGGNIY" misc_feature 232..447 /gene="LOC106092600" /note="ubiquitin-like (Ubl) domain found in small ubiquitin-related modifier SUMO-2, SUMO-3, SUMO-4, and similar proteins; Region: Ubl_SUMO2_3_4; cd16115" /db_xref="CDD:340532" misc_feature order(232..234,238..240,265..300,304..309,319..324, 328..336,349..351,385..393,397..399) /gene="LOC106092600" /note="SUMO2 dimer-RNF4 SIM2-3 interaction site [polypeptide binding]; other site" /db_xref="CDD:340532" misc_feature order(232..234,259..288,307..309,328..336) /gene="LOC106092600" /note="SUMO2-TDG interaction site [polypeptide binding]; other site" /db_xref="CDD:340532" misc_feature order(232..234,271..288,292..300,307..312,319..324, 331..333) /gene="LOC106092600" /note="SUMO3-MCAF1 interaction site [polypeptide binding]; other site" /db_xref="CDD:340532" misc_feature order(238..240,250..288,295..297,307..312,319..321, 331..336,340..345,349..357,364..366,370..372,376..378, 442..447) /gene="LOC106092600" /note="SUMO2-Rangap1-UBC9-ZNF451 complex [polypeptide binding]; other site" /db_xref="CDD:340532" misc_feature order(256..282,286..288,307..309,331..333,358..360, 445..447) /gene="LOC106092600" /note="SUMO2-Rangap1-UBC9-RanBP2 complex [polypeptide binding]; other site" /db_xref="CDD:340532" misc_feature order(256..258,349..351,358..360,364..366,370..381, 385..387,394..396,427..429,436..438,442..447) /gene="LOC106092600" /note="SUMO2-SENP1 interaction site [polypeptide binding]; other site" /db_xref="CDD:340532" misc_feature order(349..351,358..360,364..375,379..381,385..387, 394..396,409..411,427..429,436..438,442..447) /gene="LOC106092600" /note="SUMO2-SENP2 [polypeptide binding]; other site" /db_xref="CDD:340532" misc_feature order(349..351,358..360,364..366,370..375,379..381, 385..387,394..396,427..429,436..438,442..447) /gene="LOC106092600" /note="SUMO2-SENP2-Rangap1 complex [polypeptide binding]; other site" /db_xref="CDD:340532" polyA_site 912 /gene="LOC106092600" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aagatggctg atgcgtcgcg gcggcttttt tcttgataca ttttcttcgg ttctgcttaa 61 cgaaaatttt cgcaaggcag cagcagtatt tgattgtccc gcaagtgtgt tgaacgatag 121 gctggagtga caggaattgt tgtgctatta aattattttt acattgtaaa cctttaaaaa 181 accaacacaa gttaaaaaat ggctgatgaa aagaagggat ccgaaaccga acacatcaat 241 cttaaagttt tgggacaaga caatgctgtg gtgcagttca aaattaagaa acatactccc 301 ctcagaaagc ttatgaatgc ctactgcgac agagcgggtt tgtccatgca agtggtacgg 361 tttcgctttg atggccaacc tataaatgag aatgacacac caacctcctt ggaaatggaa 421 gaaggcgaca ctattgaagt ttaccagcaa cagacgggtg gaaacattta ctaatacttt 481 tatatattac aaaaataact ttattcttaa taaatattaa aaaaaaaaac aaaactcatg 541 aaaaatgtaa taattttaat atatatatat ttaaaaaata taaaaattac cagaaagcta 601 acatccgacc gggccagaga cagcttcaat aacaagcaga aatgaaagga aatacatacg 661 aaaacctaga ccgaaccatt tacatttcct ctgaaattac aatttaagtt tcattatatt 721 tttaaatttt tctgttcttc acttactatc aattttatag atttttttat taaagatttg 781 aaagttcgct gtacacacat ttcaaaccat ttttagtcgt aaaaataaat aaaaatataa 841 actaaagatt tggtatttta aacgagtcaa ctaataaaag ctagctccaa atgtacatgg 901 acatgaaaca aa