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LOCUS XM_013259297 4330 bp mRNA linear INV 02-SEP-2023 (LOC106092428), transcript variant X1, mRNA. ACCESSION XM_013259297 VERSION XM_013259297.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013259297.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4330 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4330 /gene="LOC106092428" /note="uncharacterized LOC106092428; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:106092428" CDS 501..4013 /gene="LOC106092428" /codon_start=1 /product="uncharacterized protein LOC106092428 isoform X1" /protein_id="XP_013114751.2" /db_xref="GeneID:106092428" /translation="MSRGSTTKCRKWATFLVILLMILSFLPPSQEFSFGWGGDEEGKS KEAASTSSGREARKTPKRHVVEKKHKFHKIERIIIEDDEDEGDEEAEDNENTNEYGGG GGDSANVEDTGDNHAGEEMDDADDATNEDQERAASINSANNDDEEEEFRFKRARKAEK VARSSKKAAAASAESQEKSQSWFSFSFFGSSQKDSATSQQEEESAEAATPKSNGIIDW ILWLGERTGRLRPDSTEDTSAQEATEASGETWFDYFNRWPFNSLFPIGKPPKPIKMPK VAKKSSRDVSKADEGSEEPPMSQESFDSLLYSLPNFIIKVQDAPDAECREQLQIFQRQ LRGRKLWTLQMMDSTGKVGPGLLRGNINQFGDFNLCTDIKTVVKVAANRPVRIRGKYC LAHIETHTSITQLKIPVHMMHGRGLFNSHLGNPYHFIPRYGVANWGICVPNACGGDVV RHMLQSSLQDYNNTGVELHVEVDDNDCYVKQGRKFFKLLQKDKKFCATILYILGLFLL SMSTLAWENWSRIQPVLQRFVDIMKTSAEMIKSILGKISTWFAALMEKLKKKSETGEG EEAEGEQQTIENGSGAAEETGGEEVETTQENTAEEETKDEEETKVEKEGKDDTANAEG EEEAVEATGENLSLNHLALEIFKSFSPKRTLDILLASDTVDVPFPLIHVLKVGATFML YLCLKFLMIGHLPITNRDQLVRTLDHPLSVLIRSPMIYADILLLISGFLSAYNLSEEM EQKSYIQLLKRLALKVSRYLPTVYLLVCFQTWILPHMNSGPLWSNIIGHNARLCDDQW WRNILSVQNAIDFEETCSPSTIQLALEVQLYLLGPLIVWLYYTDSDAAFFVYGALHAM SVAARYARTNKEHLSMILFHGINVSKFYRTANILYSSPVSRATTYLLGIGAGIYQRAN NGELDLTPEMKKLGWSLSTLGIFWSLWSPSSSMRTDFIYTSSEAASYASWCPLVFGLS LCWFIFMLPKTSDNTILRFLTNSQCFLVLSRLIFPIQMVMYVVVLYGTAKVKETDKFH LTDLINIQEIAVILVGAVIVSFLIDIPSQNIRRLLVNRIFIERPHHENEDQEHLTSEP ASEASDEVSEQHLTSDTPEPPDTVWGSDPEEEEQKYIQRRRSSLLESDTKKVEESKAI EEEEEEEEEEEEEISEKEEVKRHP" polyA_site 4330 /gene="LOC106092428" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tagcagctgt aatttcgaat agaacggtcg catggtcgat ccgtggtagt ggcaatcgca 61 aagaaagcac tttcaaggca tagtcggtgc ctcacattgc tgcccctccc tttgaaaggc 121 aacaaggaac gaacagacaa acgggcggat gggcgcttct ttatggcaat tttcatacga 181 aacgagtgca tatttttaga atttctttgc tgaaaatata cgcgaaaggg aatagcaaaa 241 attcattcat atatacatca tataataaaa atttattggt gaaaaatcaa atcaaatctg 301 tttttgctct aatcaaaatc attaaagatt tgtttatata atcactcagc aggcatatat 361 aaatgtatgc aaattaataa aaactcaaat caacgaaaat caagtgcaat tttacaacac 421 taaaatacaa aacccgaaca aatgaaagtg aatttatttt aagtgaaacg aaaaccaata 481 acaaaaacag gcatacaaaa atgtcccggg gatcaacaac gaaatgcaga aaatgggcaa 541 catttttggt gattttattg atgattctat catttttacc accctcacaa gagttttcct 601 ttggttgggg tggtgatgag gaaggcaaat ccaaagaagc agcctccact tcttcagggc 661 gagaggcacg taagacgcca aagcgtcatg tggtggagaa aaagcataaa tttcataaaa 721 tcgaacgcat cataatagaa gacgacgaag acgagggcga tgaagaagct gaagataatg 781 aaaacaccaa cgaatatggt ggtggcggcg gtgattctgc caacgtagag gacactggcg 841 acaaccatgc tggcgaggaa atggacgacg ccgatgatgc cactaatgaa gaccaagagc 901 gggccgcctc tataaacagt gccaacaatg atgacgaaga ggaggagttt cgtttcaaaa 961 gagcccgcaa ggcagaaaaa gtggcacgct cttctaagaa agctgctgcg gccagtgctg 1021 aaagtcaaga aaagtcacaa tcttggttct ccttttcgtt tttcggttct tcccaaaagg 1081 acagtgccac cagccagcag gaagaggaat cagctgaggc tgccacaccc aaatcaaatg 1141 gtattatcga ttggatttta tggctgggtg aacggacggg acgtttaaga cctgattcta 1201 cagaagatac gtcggcccaa gaagcaactg aagcaagtgg tgaaacctgg tttgattatt 1261 tcaatcgttg gcccttcaat agcctctttc ccattgggaa accaccaaaa cccataaaaa 1321 tgcctaaagt agctaagaaa tccagcaggg atgtttccaa agccgatgaa ggttcagagg 1381 aaccccccat gagccaagaa tcatttgaca gtttactcta cagtctacca aatttcatta 1441 tcaaagttca agatgcacca gatgccgaat gccgcgaaca attgcaaata tttcagagac 1501 aattgagggg tcgtaaattg tggacattac agatgatgga ttccactggc aaagttggtc 1561 ctggtttatt gcgaggcaat ataaatcaat ttggcgactt caatttgtgt accgatataa 1621 aaacggtggt taaagttgca gccaatcgtc cggtgcgcat tcgcggcaaa tactgtctgg 1681 ctcacattga aacgcacacc tcgataactc aactcaagat acccgtacat atgatgcacg 1741 gtcgtggtct cttcaacagt catttaggaa acccatatca ttttataccc cgttatggtg 1801 tagccaattg gggcatttgt gtaccaaatg cttgtggtgg agatgtcgtt cgtcacatgc 1861 tgcaatcgag tttgcaggac tacaataaca ctggtgttga actacatgtg gaagtagatg 1921 ataacgattg ctatgtgaaa cagggaagaa aattctttaa acttctgcaa aaggataaga 1981 agttttgtgc aacaattctg tacattttag gtttattcct attgtcaatg tccacgctgg 2041 cctgggagaa ttggtcacgt attcaacccg tgctgcaacg attcgtagac ataatgaaaa 2101 cttcagcaga aatgattaaa tccattttgg gaaaaatctc aacatggttt gcagcattaa 2161 tggaaaaatt aaaaaagaaa agtgaaactg gtgaagggga agaggccgaa ggtgaacagc 2221 aaacaataga aaatggatct ggggcggctg aagaaactgg aggcgaggag gtagagacaa 2281 cacaggaaaa cacagctgaa gaagaaacca aggatgagga agaaacaaaa gtcgaaaaag 2341 agggcaaaga tgatacagcc aatgcagagg gggaggagga agccgtagag gcaacaggtg 2401 aaaatctctc tctcaaccac ttggctttag aaattttcaa atcattctcc ccaaaacgta 2461 cacttgacat acttttggct tccgacaccg ttgacgtacc gtttccgttg attcacgtgc 2521 taaaagttgg cgccactttt atgctgtatt tgtgtttgaa attcctaatg attggccacc 2581 tgccaataac gaatcgtgac caacttgttc gcactctcga tcatcccctg agtgtgttga 2641 tacgttcacc tatgatttat gccgatattt tattgttgat cagtggtttc ttgtccgcct 2701 ataatctgtc cgaggaaatg gaacaaaaat cgtacattca actattgaag agattggctt 2761 tgaaagtcag tagatatttg cctacggttt atttgttggt ttgttttcaa acatggattt 2821 taccccacat gaattcgggt cctctatggt cgaatataat tggacataat gctcgcttat 2881 gcgatgatca atggtggcgc aatatattga gtgtgcaaaa tgctattgac tttgaggaga 2941 catgctcacc atccacaatt caattggctt tggaagttca attgtatcta ttgggaccat 3001 tgattgtatg gctatactac acagattcgg atgctgcatt ctttgtctat ggggctttgc 3061 atgccatgtc agtggccgct cgttatgcca gaacaaataa agaacattta tcaatgattt 3121 tgttccatgg tattaatgtt agcaaatttt atcgcactgc caatatctta tactcctccc 3181 ccgtaagccg tgccaccacc tacctattgg gcataggagc gggcatatat caaagggcta 3241 ataatggaga gctagatcta acgcccgaaa tgaagaaact cggctggagt ttatccactt 3301 tgggcatatt ctggagtctt tggtcgccct catctagcat gcgtacggat ttcatttata 3361 catcttctga agcagcctca tatgcctcct ggtgtcccct ggtctttggt ctaagtcttt 3421 gctggttcat ctttatgttg cccaagacaa gtgataatac cattttaaga tttttaacca 3481 actcccagtg ttttttggtt ttatcgcgtc taatatttcc catacaaatg gtgatgtacg 3541 ttgttgtact gtatggaacg gcaaaggtca aagaaactga caaatttcat ttgacagatt 3601 tgatcaacat tcaagagatc gctgtaatac ttgtcggtgc tgtcattgtc tccttcctca 3661 tagacatacc ctcacagaat atacgccgtc tgcttgtgaa tcgcatattt atagaacgtc 3721 ctcatcatga aaatgaagat caagaacatt taacaagtga accggcttct gaagcctcgg 3781 atgaggttag tgaacaacac ctaacaagtg atactcctga accaccagac acagtatggg 3841 gatcagatcc agaagaagaa gaacaaaaat atatacaaag aaggcgtagt tctttgctgg 3901 aaagtgatac aaagaaagtg gaagagagta aagcaataga agaggaagaa gaagaagagg 3961 aggaggaaga agaggaaatc agtgaaaaag aggaagtcaa gcgacatccc taagaaaggg 4021 acgatttcaa cttatgttaa ctttgtaata ttttaagttt tggttacatc gaaatcaaaa 4081 aaagacatgc atttcctaaa agtattctct gtcccacaaa acacaacatt tctgccacac 4141 atatttttgc gttttgataa gtcttaagcc catatgatac catctcgctt aagttgtgac 4201 tttttttttt gactcaaacg aagcccttta cacttccctt tactaaagca taaacacaaa 4261 catattcatg caatgccaaa acttaaacga atgttattgt aataaaaacg tttttaaata 4321 tttcaagaaa