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LOCUS XM_013258923 1451 bp mRNA linear INV 02-SEP-2023 transcript variant X2, mRNA. ACCESSION XM_013258923 VERSION XM_013258923.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013258923.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1451 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..1451 /gene="LOC106092150" /note="histone H3.3A; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 132 Proteins" /db_xref="GeneID:106092150" CDS 138..548 /gene="LOC106092150" /codon_start=1 /product="histone H3.3A" /protein_id="XP_013114377.1" /db_xref="GeneID:106092150" /translation="MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRP GTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLV GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA" misc_feature 138..545 /gene="LOC106092150" /note="histone H3; Provisional; Region: PTZ00018" /db_xref="CDD:185400" misc_feature order(255..281,285..287,327..338,345..347,354..356, 387..398,486..494,498..500) /gene="LOC106092150" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:467036" misc_feature order(270..272,279..281,288..293,300..305,309..311, 315..317,321..326,336..341,345..353,357..362,366..368, 372..374,381..395,399..404,411..416,423..431,435..443, 447..455,462..464,489..503,513..515,522..524) /gene="LOC106092150" /note="heterodimer interface [polypeptide binding]; other site" /db_xref="CDD:467036" misc_feature order(282..284,291..296,303..308,312..314,420..422, 432..434,441..443,462..464,474..476,489..491) /gene="LOC106092150" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:467036" misc_feature order(456..458,465..470,477..482,486..488,504..509, 516..521,525..533) /gene="LOC106092150" /note="heterotetramer interface [polypeptide binding]; other site" /db_xref="CDD:467036" polyA_site 1451 /gene="LOC106092150" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cattctaaga gcacaaacgt ccgaaaccac agcgagagaa atcgtgtaac acgaaccaac 61 aaagaatttc acaataatta tcaaaataaa ttttgttaaa tattttttaa tattgttaag 121 taaaataact tgttgaaatg gcccgtacaa agcagaccgc ccgtaaatct acaggaggaa 181 aagctccccg taaacaattg gccacaaaag cggctcgtaa atcagcaccc tcaaccggtg 241 gtgtgaagaa accccatcgt tatcgccccg gtaccgtggc tctgcgtgaa attcgtcgtt 301 atcaaaaatc gactgaattg ctgatccgca agttgccctt ccagcgcttg gttcgtgaaa 361 tcgctcagga tttcaaaacc gatttgcgtt tccagtctgc agctattggt gctctgcagg 421 aagcctctga agcttatttg gtgggtttgt ttgaagacac aaacttgtgc gctattcatg 481 ccaagcgtgt caccattatg ccaaaggaca tccaattggc ccgccgcatt cgtggtgaac 541 gtgcttaagc agcttgcagc agcagcaaca ttattttcaa tatattatta atgcaagcta 601 aacagcagca gcagcaagaa gataaaaatt acatttcttt tatacatttt attattatct 661 ctcttaatga tttatcattt atattaataa caatataaca atattcaaaa aattacaaca 721 aaaatatttt attaaagaaa ataaaaaaaa caaagatgaa atccaaacaa catctatggg 781 aagaaacctt ttaacttaga tataaaagaa acaaagaaat aaatcaaacc actttaacat 841 acaagaatat acacgtttta acaatataag aaataataat taaatgacct tataaaaaca 901 acacaaacaa caaaagatat aaggtcaaat aataataaaa tatgtctatt aagaaaaatc 961 cgtaaataac ccacaataaa tacatatgca aatatgatat atatatgtac tacaatatat 1021 attacataag caagcagcaa atatgcgcaa cctataagaa acccaacaaa atatatgctt 1081 tatatttaac aacatcttaa tatatggaaa catttaattg atttataatt attattcaat 1141 ctttactagc catgtaagtt ttgtgactgt acaagaaggc ggatcattac tgatcaagat 1201 aaaataaaca aattcgaccc attatacgaa agagaagaaa agaaaagagt tacaaatata 1261 tttaatgaca actagttatg taagctttga taattattat aacagaacaa aagcaacatc 1321 ttaatttaaa ttccaaaaaa aaaacaaaca caaataagat acgatccgga acaaaaaaag 1381 aggatccaat atttataaaa tatttaaata aaagtaattg acaacaacca ccaccctcct 1441 gtaaaaagca a