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LOCUS XM_013258922 1436 bp mRNA linear INV 02-SEP-2023 transcript variant X1, mRNA. ACCESSION XM_013258922 VERSION XM_013258922.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013258922.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1436 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..1436 /gene="LOC106092150" /note="histone H3.3A; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 132 Proteins" /db_xref="GeneID:106092150" CDS 123..533 /gene="LOC106092150" /codon_start=1 /product="histone H3.3A" /protein_id="XP_013114376.1" /db_xref="GeneID:106092150" /translation="MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRP GTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLV GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA" misc_feature 123..530 /gene="LOC106092150" /note="histone H3; Provisional; Region: PTZ00018" /db_xref="CDD:185400" misc_feature order(240..266,270..272,312..323,330..332,339..341, 372..383,471..479,483..485) /gene="LOC106092150" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:467036" misc_feature order(255..257,264..266,273..278,285..290,294..296, 300..302,306..311,321..326,330..338,342..347,351..353, 357..359,366..380,384..389,396..401,408..416,420..428, 432..440,447..449,474..488,498..500,507..509) /gene="LOC106092150" /note="heterodimer interface [polypeptide binding]; other site" /db_xref="CDD:467036" misc_feature order(267..269,276..281,288..293,297..299,405..407, 417..419,426..428,447..449,459..461,474..476) /gene="LOC106092150" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:467036" misc_feature order(441..443,450..455,462..467,471..473,489..494, 501..506,510..518) /gene="LOC106092150" /note="heterotetramer interface [polypeptide binding]; other site" /db_xref="CDD:467036" polyA_site 1436 /gene="LOC106092150" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 acataaattc tgccaacaaa gtgacattcg taaattaact tgaaaactgt aaacttgtgc 61 tcttggaaat cttaacttct taactttttc tcaatccatt tgaagtcaga taacttgttg 121 aaatggcccg tacaaagcag accgcccgta aatctacagg aggaaaagct ccccgtaaac 181 aattggccac aaaagcggct cgtaaatcag caccctcaac cggtggtgtg aagaaacccc 241 atcgttatcg ccccggtacc gtggctctgc gtgaaattcg tcgttatcaa aaatcgactg 301 aattgctgat ccgcaagttg cccttccagc gcttggttcg tgaaatcgct caggatttca 361 aaaccgattt gcgtttccag tctgcagcta ttggtgctct gcaggaagcc tctgaagctt 421 atttggtggg tttgtttgaa gacacaaact tgtgcgctat tcatgccaag cgtgtcacca 481 ttatgccaaa ggacatccaa ttggcccgcc gcattcgtgg tgaacgtgct taagcagctt 541 gcagcagcag caacattatt ttcaatatat tattaatgca agctaaacag cagcagcagc 601 aagaagataa aaattacatt tcttttatac attttattat tatctctctt aatgatttat 661 catttatatt aataacaata taacaatatt caaaaaatta caacaaaaat attttattaa 721 agaaaataaa aaaaacaaag atgaaatcca aacaacatct atgggaagaa accttttaac 781 ttagatataa aagaaacaaa gaaataaatc aaaccacttt aacatacaag aatatacacg 841 ttttaacaat ataagaaata ataattaaat gaccttataa aaacaacaca aacaacaaaa 901 gatataaggt caaataataa taaaatatgt ctattaagaa aaatccgtaa ataacccaca 961 ataaatacat atgcaaatat gatatatata tgtactacaa tatatattac ataagcaagc 1021 agcaaatatg cgcaacctat aagaaaccca acaaaatata tgctttatat ttaacaacat 1081 cttaatatat ggaaacattt aattgattta taattattat tcaatcttta ctagccatgt 1141 aagttttgtg actgtacaag aaggcggatc attactgatc aagataaaat aaacaaattc 1201 gacccattat acgaaagaga agaaaagaaa agagttacaa atatatttaa tgacaactag 1261 ttatgtaagc tttgataatt attataacag aacaaaagca acatcttaat ttaaattcca 1321 aaaaaaaaac aaacacaaat aagatacgat ccggaacaaa aaaagaggat ccaatattta 1381 taaaatattt aaataaaagt aattgacaac aaccaccacc ctcctgtaaa aagcaa