Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

PREDICTED: Stomoxys calcitrans uncharacterized LOC106092102


LOCUS       XM_013258866            1733 bp    mRNA    linear   INV 02-SEP-2023
            (LOC106092102), transcript variant X2, mRNA.
ACCESSION   XM_013258866
VERSION     XM_013258866.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013258866.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1733
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1733
                     /gene="LOC106092102"
                     /note="uncharacterized LOC106092102; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:106092102"
     CDS             186..1505
                     /gene="LOC106092102"
                     /codon_start=1
                     /product="uncharacterized protein LOC106092102 isoform X2"
                     /protein_id="XP_013114320.1"
                     /db_xref="GeneID:106092102"
                     /translation="MTTQTRAIISQLFAIFNVVFVVVIAVCCTPRRQLLSIRVPSGQS
                     GNNKEKEIYQNISLTAFVQRLLTKRCASFFGKNDKYLLVSGERGCSSFMDVGTAHEKS
                     PLLLKNVLSYDEIKLSAFLSVSSHSEFLNSGNRYNCRKIEKHKYAIEREGVVIGLTGP
                     RLTRPEIMDYQDIIIAKTQNTKEKGYGFGFDEHPDCRVKDYRQLWKRFYEEPDYLHAN
                     VKIDNIRFGPSKNSEEILDSLIMKKRYAISFDTLLLESEARAKEAGKQAFVHVMGIGL
                     SRLWKATDQQEKIFLKAFIQRVQYLLPKLQHIDVLHFSMFHLGKWDELTDGTVIESPT
                     HPSGGIKMFLSKRNPSENLKTRGFGNRLLIVSYASDGNALPGNEFWMGCFNTSSNAST
                     AWSTLVTEIHNPHINTEWVNGDNLHIATEEYGVMHISEYAKKKLLHV"
     misc_feature    309..1484
                     /gene="LOC106092102"
                     /note="Domain of unknown function (DUF4804); Region:
                     DUF4804; pfam16062"
                     /db_xref="CDD:435109"
     polyA_site      1733
                     /gene="LOC106092102"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aagtgcacca actgggcaac tgtaaatgca aatttgcccc tgaacattcc atgatggaac
       61 aggggcatat caatgagtgc tgtccggtta agtcaaagct taatgataat gatgtggcca
      121 acaaaattta gttctttttt ctcttccttt taatacaaac aaattctttt gtgaacgtcc
      181 acgcaatgac gacgcagaca cgggcaatta tttcacaatt atttgcaata ttcaatgttg
      241 tctttgttgt tgttatagca gtgtgttgta caccgaggcg gcagctcttg tcgataaggg
      301 ttccgtcggg tcaatccggc aataataaag aaaaagagat ctatcaaaat ataagtttaa
      361 ccgctttcgt gcaaaggttg ttgacgaaac gctgtgcaag tttctttggc aaaaatgaca
      421 aatatctttt ggtaagcggc gaacgcggtt gcagtagttt tatggatgtg ggcacagcac
      481 atgaaaaatc tccattgctt ttgaaaaatg tcttaagtta tgatgaaatc aagctttcag
      541 catttttatc agtgtcctcc cactcggaat ttctaaatag tggtaaccgt tacaattgca
      601 ggaaaattga gaaacacaag tatgcgattg aaagagaggg tgttgtaata gggttaactg
      661 gaccaagatt aacacggcca gaaattatgg attaccaaga catcattata gcaaaaaccc
      721 aaaataccaa ggaaaagggt tatggttttg gcttcgatga acatcctgac tgccgtgtga
      781 aggactatcg ccaattgtgg aaacggtttt atgaggagcc cgactattta catgccaatg
      841 taaaaataga taatatacgc tttggtccca gcaagaattc cgaagaaatt ctcgatagtt
      901 tgattatgaa aaaacgctat gctatatcat ttgacacatt gctattggag agtgaggctc
      961 gagccaaaga agctggaaaa caggcctttg tccatgtaat gggcataggg ctgagtcgtc
     1021 tatggaaagc cactgaccaa caggaaaaga tttttctaaa ggcctttata caacgtgtcc
     1081 aatatttgct gcctaaactg cagcacatcg acgtcttgca tttttccatg ttccatctcg
     1141 gcaaatggga tgaattaaca gatggaacgg taatagaatc gccaacccat ccttcgggag
     1201 gcatcaaaat gtttttgtca aaaagaaatc cctcggaaaa tttgaaaacc cgaggatttg
     1261 gcaataggct tttgatagta tcatatgcaa gtgatggaaa tgctttgcca ggaaacgaat
     1321 tttggatggg ttgttttaat acctccagta acgcttcgac cgcatggagc actttagtaa
     1381 ctgaaattca caatccacac atcaacaccg agtgggtcaa tggtgacaat ttacacatag
     1441 ccaccgaaga atatggagtg atgcatatat cggaatatgc caagaaaaaa ttgttacacg
     1501 tctaaaggga tttgtttgca tttcaagttg actatttaaa gtagaaaagc atattctaat
     1561 tcggaacaaa ttaaaccaac caaaaccaaa ctaaacagtt aattgccgaa atctaactaa
     1621 acccaaagtt ttaagactga gatagggata ataaatcttg aggtggataa accttttttc
     1681 agttatcaat tcgtagtaat actttaataa aataatcgta tataaaatat caa