PREDICTED: Stomoxys calcitrans 4-hydroxybutyrate coenzyme A

LOCUS       XM_013258602            1600 bp    mRNA    linear   INV 02-SEP-2023
            transferase-like (LOC106091904), mRNA.
ACCESSION   XM_013258602
VERSION     XM_013258602.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq; corrected model.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013258602.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1600
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1600
                     /gene="LOC106091904"
                     /note="4-hydroxybutyrate coenzyme A transferase-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 9 Proteins"
                     /db_xref="GeneID:106091904"
     CDS             120..1541
                     /gene="LOC106091904"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /codon_start=1
                     /transl_except=(pos:1191..1193,aa:OTHER)
                     /product="LOW QUALITY PROTEIN: 4-hydroxybutyrate coenzyme
                     A transferase-like"
                     /protein_id="XP_013114056.2"
                     /db_xref="GeneID:106091904"
                     /translation="MISPSSITILRRITRKQSRPWQISVNNFFSYANEIAHPLQRKPP
                     NVTPKEAVKCIKSGHTVFCQGAAATPNVLISAMVEHAKENRLEDITVCHMHTEGPAAY
                     CEPENSEIFRSSSFFMGGNVRKAVAEGRGDNFSIFLHEIPLLFYKKIVRPDVSLINVS
                     PPDRHGFCSLGTSVDCVRAALLHSKQIVAQVNKQMPRTYGDACIHSSHFDAMTEVDVK
                     LPQHGGKPGEKELKIGKLIAENLVCDGATLQMGIGVIPDAVLVALHNHKDLGIHSEMF
                     ANGVVDLVKAGAVTNRLKKMHQGRIVGSFLIGDQALYDFVNDNVSIEMYAIDYVNSVS
                     VIKQLPRMTAINSAIEVDLTGQVXSDSIGARFYSGFGGQVDFIRGAAEGIDGKGVPII
                     AIPSVTNKGESKIVPMLKPGAGVVTSRAHVHYVVTENGIASLFGKNMRQRAYELIKVA
                     HPDHQEKLEKAACERLKVKPSSC"
     polyA_site      1600
                     /gene="LOC106091904"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 actgtcaatc gacaaaaatt atttaataat tttttattga aattgttgga agcaaaaacc
       61 aagactaaaa ctcatatcga agttgaaaaa cataaattgt tcagcttttg taactcacca
      121 tgatatcgcc ttcatcaatt accatcctta gaagaatcac aagaaagcag tcacgaccct
      181 ggcagataag cgtcaacaac tttttcagtt atgccaatga aattgctcat cctctacaac
      241 gcaaaccacc aaatgtaaca cccaaagaag ctgttaaatg catcaaatct ggccataccg
      301 tattctgtca gggagctgca gccactccca atgtcctcat cagtgccatg gtcgaacatg
      361 caaaggaaaa tcgtttggag gacatcactg tatgccacat gcacaccgaa ggaccagcag
      421 cctattgtga accggaaaat agtgaaatat ttcgttccag ctcctttttc atgggcggaa
      481 atgtacgcaa ggcagtggca gagggacgtg gcgataattt ctccatattt ctgcatgaaa
      541 tacctcttct gttctataag aaaatcgtcc ggccagatgt aagtttgatc aatgtttctc
      601 ctccagatcg tcatggcttt tgctcgttgg gaaccagcgt cgattgtgtt agagcagctt
      661 tattgcactc taagcaaata gtagcccagg tcaataaaca aatgccaagg acctatggcg
      721 atgcctgtat acattcctct cactttgatg ccatgaccga agttgatgtt aaacttccac
      781 aacatggtgg caagccaggt gagaaagaat tgaaaattgg caaattaata gccgaaaatc
      841 tggtttgtga tggagccacc ttgcaaatgg gcataggtgt catacccgat gccgttttag
      901 tagccctgca taatcacaaa gatttgggta tacattcgga aatgtttgcc aacggtgtag
      961 tggatctggt aaaggcggga gctgtaacca atcgccttaa gaaaatgcat caaggtcgca
     1021 ttgtgggatc tttccttata ggcgatcaag ctctgtatga ttttgtcaat gacaatgtgt
     1081 ccattgaaat gtatgccatt gattatgtga acagtgtgag tgtcatcaaa caattgcccc
     1141 gcatgacagc catcaattca gccattgagg tggacttaac cggtcaggtg tgatccgatt
     1201 ccattggtgc acgtttctat tcgggatttg gtggtcaagt ggatttcata cgtggagctg
     1261 ccgagggtat tgatggcaag ggagtgccca taatagccat tccctcggta accaacaaag
     1321 gtgagagtaa aattgtgcct atgcttaagc ccggcgcggg agttgtgaca tccagagccc
     1381 atgtccatta tgtggtcact gagaatggta ttgcttcgct gtttggaaag aatatgcgtc
     1441 aacgtgccta tgagttgata aaggtagccc atcccgacca tcaggagaaa ttggagaaag
     1501 ctgcctgtga acgtttgaag gtgaagccat ctagttgtta aatttgtttt ggggagtata
     1561 aaatgttaat ccgttaacaa ttttattaaa tatttgcaaa