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LOCUS XM_013258094 7035 bp mRNA linear INV 02-SEP-2023 (LOC106091547), mRNA. ACCESSION XM_013258094 VERSION XM_013258094.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013258094.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7035 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..7035 /gene="LOC106091547" /note="zinc finger protein 236; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins" /db_xref="GeneID:106091547" CDS 1012..6801 /gene="LOC106091547" /codon_start=1 /product="zinc finger protein 236" /protein_id="XP_013113548.1" /db_xref="GeneID:106091547" /translation="MLATHTHNNSPDDGPVHNIVTATIATPIKMERRDSATSESSLEH LDLGRTPKKLSAATSTPVVTNDKTRNAAAGALVEPSNTDNERYLQHHRNKMQQDSDEA NDYDDEESADEKSITAPRQQMQHKRRLTSRNFMDKHTSVHIEYNADNPNSLRKKFRFN RSSIDHGNESGFVDASSSQLLSSSPVTATTVVLENIGPNNGDNNGGSKSNSSSAASTP PHQQSNGSNSSADSATGEDMKYVCPICDVVSATPHQFTNHIRCHNYTSGNTENFTCRI CSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQHTHHRRNS NGTKFNSNTTAAAAKAAIGGCPTPLSHSGQLSEGVKLSAVVAASPTANEAELNSHGVL ASAAANNNHNIGGSSNTTGANDKRLSVNAEATSARESYESDGECCSSDNSMAHNNNNN DLKINNNNYKRKLSGGGDDVDDDLLRQHQLQQRNQNSEELFKQQLKAIVNNKSTNVAN SNTSPRNSREEDGKSAQASSNEPLICPVCNDDEFSDVMALDQHMDAKHPEIPAKCTHC GVIFRSHHQLSIHPCSADDVKPQVVVDHPSTPRQRKLSEHSVGHSPQDHSPDDHEHNA DQRRRQELFQHVELKNMMSRTHTPSSSYHNLDLAEDDIKSEPSAGHDSKDLADIQSIL NMTSSSSTSNFLKNFEQSVNTPSSQFSYDRDEEEAQDVFTAEFRKMKLRGEFPCKLCT AVFPNLRALKGHNRVHLSEVGPAGPFRCNMCPYTICDKAALVRHMRTHNGDRPYECAV CNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSSCDDPTKKQHLFSSPDIED DIEFYQQPGRRDSSTPVSHLKEMLTSGTDNHASPKPAKIQVKNLNEMLDKSTSSSGYN DSYDKQLSEKSATVAIDMSMDVLDLSKKPTGRTNAQKPNETNDEMPHPLMQKEENISI GPLMPSSVDEASTLEKQQQLLMGQQPWLNDTAQYLQQLYRNLLFPQLNPFLMPNSPFM PQNMADFQKLAPFFRTMLGTTAGTTLPPSADLDKATSSAPPTANLPPISPMMTEKSSS VSMASPKAGLLSPNPSHLSIPRHVVNGSLSTQTPHLPPTILSNGPVKMVLKNGVFMPK QKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQYYAQRQRSGHHVMRGRGASNA ANINNITRLQAAVAHAHYGGNPNSSITSHSPISDQVKYAILAQQLKARKDPDLLQQAL VHGSNSVANSNLFSNHLSAHNNGGAAVPHAFPNYSSHQQHQQQHLSQNGTPNGSMEDD EPKLVIDEDDDDEECDEEDEDEVGEIHDDDDDYPDHDIQLMEKDADPAEEHQLPTTVE EVKLKPEEKKEAAKKMAESILEQAIKAGQNMPTKTEVPATVNSNNTMKSMIAQAPAVG KFLKEVASSPFKDESQDLVPVAKLVDNATSNSVSFNSYFRPGDVANHMDHSDEEGLVA SGSASESNNSGAEDAATSAQTKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTG QKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSVYVPDEDVNEPIPLPKSVEEIER EKEREEEEKRRLAEEQRERLEREQREKEKLEQERQQQQRQAIRKLAEVQFNQFQLKTE AAPASAISSSELPYKCHLCESSFAERAQCLDHIKCFHTQEYDLLLSKGAIDSEVEANQ INSNEEEERNRTQEEATKGVKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPF QCDICLRKFTLKHSMLRHMKKHNGLHGNGSLHGVDGLHNGNSCSDYSDDEQGPLPAAP AAPPANFNALLLGTMGSKIQELLSKANEWGNGAGLSVLRERKQNINDDSAMVQSDLIG NLLGISDQGILNKLMSSPDEAAKLLGVEK" misc_feature 1735..1797 /gene="LOC106091547" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(1750..1752,1756..1758,1762..1764,1768..1773, 1780..1785,1792..1794,1846..1848,1852..1854,1864..1869, 1876..1881,1888..1890,1930..1932,1936..1938,1942..1944, 1948..1953,1960..1965) /gene="LOC106091547" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 1831..1893 /gene="LOC106091547" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1867..1944 /gene="LOC106091547" /note="Zinc-finger double domain; Region: zf-H2C2_2; pfam13465" /db_xref="CDD:463886" misc_feature 1915..1971 /gene="LOC106091547" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 3217..3279 /gene="LOC106091547" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(3232..3234,3238..3240,3244..3246,3250..3255, 3262..3267,3274..3276,3328..3330,3334..3336,3346..3351, 3358..3363,3370..3372,3412..3414,3418..3420,3424..3426, 3430..3435,3442..3447) /gene="LOC106091547" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 3313..3375 /gene="LOC106091547" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 3349..3426 /gene="LOC106091547" /note="Zinc-finger double domain; Region: zf-H2C2_2; pfam13465" /db_xref="CDD:463886" misc_feature 3397..3453 /gene="LOC106091547" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 5599..5661 /gene="LOC106091547" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275370" misc_feature order(5614..5616,5620..5622,5626..5628,5632..5637, 5644..5649,5656..5658,5698..5700,5704..5712,5716..5721, 5731..5733,5743..5745) /gene="LOC106091547" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275370" misc_feature 5635..5712 /gene="LOC106091547" /note="Zinc-finger double domain; Region: zf-H2C2_2; pfam13465" /db_xref="CDD:463886" misc_feature 5683..5748 /gene="LOC106091547" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275370" misc_feature 6283..6345 /gene="LOC106091547" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 6319..6393 /gene="LOC106091547" /note="Zinc-finger double domain; Region: zf-H2C2_2; pfam13465" /db_xref="CDD:463886" misc_feature 6367..6429 /gene="LOC106091547" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" polyA_site 7035 /gene="LOC106091547" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 taacttagaa ctaaactgtt gaacagcaaa tactacgaac acgcatactt atatttaagc 61 ctgcaatcca taaaagaaaa catacgcaca cttatacact gctcttaata caaaaaattt 121 agataaatta agactaaacc cccactcaga ccaaacgaca cacatacaaa ttctacactt 181 tgtacaaacg aaaaagcagc agcactctag aaaactaata agaaaccgaa gaagaaaagg 241 aggaatcgta catatacatg catcgtgtaa cggatacgtt gttgcttttg aactcaactc 301 tgtgggcaga gagtttctcc cgtaattgtg tactcgacga cgtgctctgc gacaaacaaa 361 cgtaacttaa gtttagtttt gggttttaac gaaaccaatc attacgggtg tgttcgcgaa 421 cgtagataca tcaggcggag aaaaaatcta tgcatcgctc ggaaaaaaca agacacattt 481 gtttagaaaa attcaaggca tcagaaaact cggaacggaa aatatattca acaaagataa 541 aaaaacacat aatagtatgc ttacatatat tgctcactta ataccaaaaa acaaataaca 601 aaaaataagt aaaaaaaata ataataatac aaaagcctga aagccaccac agaagaaaca 661 aaataatttt atggtgcaat ataattaaaa gtgaaaatta ccaaaaagct taaagaaatg 721 tcacacaatt ttctctaaga aaaatagaaa aattaaagaa aataagaata gaaaatttgt 781 ttcctaaact tacaatgcct taacaatgag acaaagtttt actccaattt cattggaaac 841 tagtgatgca aatacaaaaa tattacaaaa aaatatttgg caaattggaa aacagctcac 901 acatacttaa cttaaaacgg attatcgcag aatattttta aaaggataga tatatcttcg 961 gccataaaag caaagtagca cattttcaaa tccctttcaa tcacaataac aatgttggcc 1021 acacacacac acaataacag cccagatgat gggcctgtgc ataacatcgt caccgctaca 1081 atcgccaccc ccattaaaat ggagagacgt gattcagcca catccgaatc atcgttggag 1141 catttggatt tgggtcgcac accgaaaaaa ttgagtgcag ccacctctac cccagttgtg 1201 accaatgata aaacacggaa tgccgctgct ggtgccttag ttgagccgag taacacagat 1261 aacgaaagat atttgcagca tcatcgcaat aaaatgcaac aggattccga tgaggccaat 1321 gactacgatg atgaagagtc ggccgatgag aagagcatta cagctccacg ccaacaaatg 1381 cagcacaagc gtcgcctgac ttctcgcaat ttcatggaca aacataccag cgtacacata 1441 gaatataacg cggacaatcc caattcgctg cgtaagaaat tccgtttcaa tcgtagttcc 1501 atagatcatg gtaacgagtc tggtttcgtt gatgccagca gcagtcagtt gttgagttca 1561 agcccagtga cagctactac cgtagtcctt gaaaatattg gccctaacaa tggtgacaat 1621 aatggtggtt ctaaatcgaa tagttcatcg gccgcctcca caccgcctca tcagcaaagc 1681 aatggtagca attcaagcgc cgactcagca acgggcgagg atatgaaata tgtttgccca 1741 atttgtgatg tggtttcggc cacaccgcat caatttacaa atcacattcg ctgccacaat 1801 tatacctcag ggaatacgga gaatttcacc tgccgtattt gctcaaaggt actgtcatct 1861 gcatcttcgc tggatcgcca cgttctagtt cacactgggg aaagaccatt caattgtaaa 1921 tattgtcatc tcacttttac aacaaatggc aacatgcatc gccacatgcg cacccacaaa 1981 cagcatcagc acacacatca tcggcgcaac tcaaatggaa caaagttcaa ctcgaacacc 2041 acggcggcgg cggcgaaagc ggcaattggg ggttgcccaa cgccattaag ccatagtgga 2101 caattaagtg aaggcgttaa attatcagca gtggtagcgg cttcgcctac agccaacgag 2161 gcagagctca acagccatgg tgtgttggca tctgctgcag caaacaacaa ccacaacata 2221 ggcggcagca gtaacacgac aggtgctaat gacaagcgat taagtgttaa cgctgaagcc 2281 acatcagctc gagaaagtta tgaaagtgat ggtgagtgct gctcttcgga taattcaatg 2341 gctcacaaca acaataacaa tgacttgaaa attaacaata ataactataa acgtaagtta 2401 agtggtggtg gcgatgatgt tgatgatgat ctccttaggc aacaccaact acaacaacgc 2461 aatcaaaact ctgaagagtt gtttaagcaa caattaaaag caattgttaa caacaaatcc 2521 accaacgtcg ccaactccaa tacatccccc cgtaacagcc gcgaggaaga tggcaaatcg 2581 gctcaagctt ccagcaatga gcccttaatc tgtcccgtct gtaatgatga tgaattttct 2641 gatgttatgg ccctggatca gcatatggat gccaaacacc cagaaattcc agccaagtgt 2701 acccattgcg gcgttatttt ccgttctcat catcagctca gcatacatcc ctgttcggct 2761 gatgatgtga aacctcaggt tgttgttgac caccctagca ctccgagaca gcggaagtta 2821 agtgaacact ctgtgggaca ttctccgcaa gatcattctc cagatgacca tgagcataat 2881 gcggaccaac gaagacgcca agaattattc caacacgtgg aattgaaaaa tatgatgagc 2941 cgaacccaca cgccttcctc ctcttatcat aatttagatc ttgccgaaga cgatattaaa 3001 tcggaacctt ctgccggcca tgattctaaa gatttagctg atatccagtc gatacttaat 3061 atgacctcgt cgtcgagtac ttcgaatttc ctcaaaaatt ttgaacaatc tgtgaatacg 3121 ccatcatcac aattcagtta cgaccgtgat gaagaagagg cccaagatgt tttcacggcc 3181 gaatttcgta aaatgaaatt gcgcggcgag ttcccctgca agttatgtac agcggttttt 3241 cctaatctca gggccctcaa gggccataac cgagtacacc ttagtgaggt aggccctgcg 3301 ggtcccttcc gctgcaatat gtgcccatat acgatttgtg acaaggcggc cctggtacgc 3361 catatgcgta cacacaatgg cgatagaccg tatgaatgtg ccgtctgtaa ttatgccttt 3421 acaaccaaag ccaactgtga acgccatttg cgcaatcgcc acgccaaaac aactcgagat 3481 gaagttaaac gtgccattat ctatcatcct tctgaggatt cgagttgtga tgatcctact 3541 aaaaagcaac atctcttctc ctcacctgat atcgaagacg atattgaatt ctatcaacag 3601 cccggtcgaa gagacagctc cacgcctgtt tctcatctca aagaaatgct gacatcgggg 3661 actgataatc atgcctcccc caaaccggca aaaatccaag tgaagaacct aaatgaaatg 3721 ttggacaaat ccacatcttc ctcaggttac aacgatagtt acgataaaca actgagtgaa 3781 aaatctgcaa ctgttgccat tgatatgagt atggacgttt tagatctgag caaaaagcct 3841 acaggccgaa caaacgcaca gaaacccaat gaaacaaacg atgaaatgcc tcatcctcta 3901 atgcaaaagg aagagaacat atccattggc cctttgatgc ccagtagtgt cgatgaggca 3961 tcaacactgg aaaagcaaca acaattgctt atgggtcaac agccgtggct caacgatacg 4021 gcccaatacc tacagcaact atatcgaaat ttactatttc cacaactcaa tcccttccta 4081 atgcctaatt ctccatttat gcctcaaaat atggctgatt ttcagaaatt ggctccattc 4141 tttagaacta tgttgggcac tactgcgggg acgacattac cgccttcagc cgatttggat 4201 aaggccacat cttctgcacc acctacagca aatttacctc ctattagtcc catgatgacg 4261 gaaaagtcta gttcggtctc aatggcctcg ccgaaggctg gattactctc tcccaacccg 4321 agtcatctca gcatacccag acatgttgtg aatggctcat tgtccacaca aactccacat 4381 ttgccaccta ccattttatc caacgggccg gttaaaatgg ttttaaaaaa tggcgtgttt 4441 atgcctaaac aaaagcaaag gcgttatcgc accgaacgtc ccttcgcctg cgaacattgc 4501 tctgcccgct ttaccctgcg atcaaacatg gaacgccacg tgaagcaaca acatccccaa 4561 tattatgctc aacgtcagcg tagtggtcat catgtaatgc gtggccgcgg agccagcaat 4621 gctgccaata taaataacat aacccgccta caggctgccg ttgcccacgc gcattatggt 4681 ggtaatccaa attcatcaat taccagccac tcccctattt cggatcaggt caaatatgca 4741 atcttggccc aacaactcaa agctcggaag gatccggatc ttctgcaaca agctttagta 4801 catggttcaa atagtgttgc caattcaaat ttattttcaa atcatttgag tgctcataac 4861 aatggtggag ctgcggtgcc acatgccttt cccaactatt ccagtcatca acaacatcag 4921 caacagcact tgagtcaaaa tggcacccct aacggttcca tggaggacga tgagcccaaa 4981 ctagtaatcg atgaagatga tgatgatgaa gaatgcgatg aggaggatga agatgaggtg 5041 ggagaaattc atgatgatga cgatgactat cccgaccatg acatccaact gatggagaag 5101 gacgctgacc ccgcggagga acaccagtta cccaccacgg tggaagaggt taaacttaag 5161 cccgaagaaa aaaaagaagc tgccaaaaag atggcagagt ctatattgga acaggccatt 5221 aaggctggcc aaaatatgcc aaccaaaaca gaagtacctg ctactgtgaa ttccaacaac 5281 accatgaaat ccatgattgc tcaagctcca gctgtgggaa aatttctgaa agaggtggcc 5341 agttccccat tcaaagatga atctcaagac ctggtgcccg tagcaaagtt agtagacaat 5401 gctaccagca actcagtgtc attcaacagc tattttcgcc ctggagatgt ggccaatcac 5461 atggatcaca gtgatgagga gggtttagtg gcctccggca gtgccagtga aagcaataat 5521 tcaggcgctg aagatgctgc caccagtgct caaaccaaga agaagtcagc ctatagcttg 5581 gctccaaatc gtgtatcctg tccatattgc caacgcatgt ttccttggtc tagttccctt 5641 cgacgacata ttttgacaca taccggacag aaacctttta aatgttctca ttgccctttg 5701 ctttttacaa caaagagcaa ctgtgatcgc catctattgc gcaaacatgg caatgtggag 5761 tctgcagtct ccgtctatgt acccgatgag gatgtcaacg aacccatacc cttgcccaag 5821 tccgttgaag aaatcgaaag agaaaaggaa cgtgaagagg aagaaaagcg acgtttggcc 5881 gaagaacaaa gagaacgcct ggagcgagag caacgagaaa aggagaaact tgagcaagag 5941 cgtcagcagc aacagcgcca ggctattcgc aagctggcgg aagtacaatt taaccagttc 6001 caactgaaga ccgaggcggc accagcttcg gcaatttcct cttctgaatt gccttataaa 6061 tgccatttat gcgagagttc ctttgctgag agagctcaat gtctggatca catcaaatgt 6121 tttcacactc aggaatatga tttgttattg tccaaaggcg ccatagatag tgaggtcgaa 6181 gcgaaccaaa tcaattccaa tgaggaagag gagcgcaatc gaacccaaga ggaggcaaca 6241 aagggagtaa aatatccaga ttatagcaat cgcaaagtta tatgcgcatt ttgtgtgcga 6301 cgtttctggt ccaccgaaga tctacgacgc catatgcgta cccattcggg ggagaggcca 6361 tttcagtgtg acatttgcct gcgcaaattc acattgaagc acagcatgct gcgccacatg 6421 aagaagcaca atggtcttca tggcaatggc tcgttgcacg gagttgatgg tctgcataat 6481 ggcaatagct gctcagacta ctcagatgac gaacaaggac cattgccggc tgcaccagca 6541 gcaccacctg cgaattttaa tgccctcttg ttgggtacca tgggctccaa aatacaggaa 6601 ttgctaagca aggccaacga gtggggcaat ggagctggcc tctcagtgct gagggagcgt 6661 aagcagaata ttaacgacga ttcggctatg gtacaatcgg atctaattgg caatctcttg 6721 ggcatcagtg atcagggcat actcaataaa ttgatgtcat cgccagatga ggcagccaag 6781 ctgttgggag ttgaaaagta aaggctacaa tcaactcacc ccactcctct tttctttcct 6841 agttattctc tagtcacttg acacacggtc tcttgtattt tgtacttata taactttagc 6901 tcgcatatcg tcctcatcgc cctgatatct actacaacag tcttttgagg gaatgcgttc 6961 aatgtttttt tctttttaat ttcatcatta aactttaaat taaagttttt atttcaacac 7021 agctccattt ttttt