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LOCUS XM_013257858 1796 bp mRNA linear INV 02-SEP-2023 (LOC106091364), mRNA. ACCESSION XM_013257858 VERSION XM_013257858.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013257858.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1796 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..1796 /gene="LOC106091364" /note="T-complex protein 1 subunit zeta; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins" /db_xref="GeneID:106091364" CDS 134..1729 /gene="LOC106091364" /codon_start=1 /product="T-complex protein 1 subunit zeta" /protein_id="XP_013113312.1" /db_xref="GeneID:106091364" /translation="MASISLLNPKAEFARAANALAINISAAKGLQDVMRTNLGPKGTM KMLVSGAGDIKITKDGNVLLHEMQIQHPTASMIARASTAQDDSTGDGTTSTVLLIGEL LKQADIFLAEGLHPRIVTEGFEKAREQALAVLETMKIPIEVNKKNLTEVARTSLKTKV HAALADLLTDVCVDAILAIRQDEKPVDLHMVEIMEMQHKTATDTSLIKGLVMDHGSRH PDMPKRLEKAYILTCNVSMEYEKSEVNSGFFYKTAEEREKFVKAEREFIDQRVQKIIE LKRKVCDGTDKSFVVINQKGIDPMSLDALAKEGIMALRRAKRRNMERLALACGGTAMN SVDDLEESHLGYAGVVYEHVLGENKYTFVEECKNPQSVTILIKGPNKHTIVQIKDAIR DGLRAINNAINDKCVVPGASAFEVRAYNQLMKHKDTVKGKVRLGIQAFAEALLVIPKN LAINSGYDAQDTIVKLTEEDRLNPDPVGLDLSTGEPMKPVDLGVYDNYIVKKQTLNSC SVIASNLLLVDEVMRAGMTSLKG" misc_feature 152..1711 /gene="LOC106091364" /note="TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL)...; Region: TCP1_zeta; cd03342" /db_xref="CDD:239458" misc_feature order(164..166,176..178,260..271,275..277,329..331, 335..337,347..349,359..361,368..370,1274..1276,1682..1702) /gene="LOC106091364" /note="ring oligomerisation interface [polypeptide binding]; other site" /db_xref="CDD:239458" misc_feature order(245..253,401..403,413..415,593..595,1310..1312, 1364..1366,1484..1486,1613..1615,1619..1621) /gene="LOC106091364" /note="ATP/Mg binding site [chemical binding]; other site" /db_xref="CDD:239458" misc_feature order(1424..1426,1478..1480,1505..1507,1511..1516, 1523..1525) /gene="LOC106091364" /note="stacking interactions [active]" /db_xref="CDD:239458" polyA_site 1796 /gene="LOC106091364" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aacacactct gcttgacaat ctgcacattt taatttgtct ctttgtggaa ttggtcatcg 61 caatatcggc tctggaaaat tcttattact gcctgtctag ttcaaagtaa ttactaaact 121 ccgtgtttaa acaatggctt caattagttt gttgaatccc aaagctgaat ttgcccgtgc 181 cgcaaatgcc ttggccataa atatctcggc agccaagggt ttgcaagatg tcatgcgaac 241 caatttggga cccaaaggaa caatgaaaat gttggtttcc ggcgctggcg atataaaaat 301 caccaaggat ggcaatgttc ttttgcatga aatgcaaatt caacatccaa ctgcctctat 361 gatagcccgt gccagtaccg cccaagatga ttctactggt gatggtacta catccactgt 421 tctgctcatt ggcgaattgc ttaagcaagc tgatatcttc ttggccgaag gtttacatcc 481 tcgcattgtc actgaaggct ttgagaaagc tcgcgagcaa gccttggctg tcttggagac 541 aatgaaaatt cccattgaag tcaataagaa gaatttaact gaagttgctc gtaccagtct 601 gaagactaag gtccatgcag ctttagccga tttgttgacc gatgtttgtg ttgatgccat 661 tttggccatt cgtcaagatg agaaaccagt tgacttgcac atggtggaaa ttatggaaat 721 gcaacataaa actgccacag atacttctct gattaagggt ttggttatgg atcatggctc 781 cagacatcct gatatgccca agcgtttgga aaaggcctac attttgactt gcaacgtttc 841 catggaatac gagaaatctg aggtaaactc tggtttcttc tataaaactg cggaagaacg 901 tgaaaagttt gtcaaggctg aacgtgaatt tattgatcaa agagtccaga aaatcatcga 961 attgaaacgt aaggtctgtg atggtactga caagtcattt gtggtcatca atcaaaaggg 1021 tattgacccc atgtctttgg atgccttggc caaagaaggc attatggcct tgcgtcgcgc 1081 caagcgccgt aacatggaac gtttggcttt ggcctgtggt ggtactgcca tgaattcggt 1141 cgatgatttg gaagaatctc atttgggcta tgctggtgtt gtctatgaac atgtattggg 1201 tgagaacaag tatacatttg tcgaagaatg caagaatccc caatctgtga ccatcttgat 1261 caagggtccc aacaaacata ccattgtcca aattaaggat gccattcgtg atggtttgag 1321 agccattaac aatgccatta atgacaaatg tgttgtccca ggagccagtg ctttcgaagt 1381 aagagcctat aaccaattga tgaaacacaa ggataccgtt aagggcaagg tacgcttggg 1441 catacaggca tttgccgaag ctcttttggt tatacccaag aatttggcca tcaatagtgg 1501 ctatgatgct caagatacca tagttaagtt aacagaggag gatcgtctaa atcctgatcc 1561 tgtgggtctg gatctatcca cgggagaacc catgaaacct gtagatctgg gcgtatacga 1621 caattacata gttaagaaac aaacattgaa ttcctgttcg gtaattgcca gtaatctctt 1681 gctggtcgat gaggttatgc gcgccggcat gactagtcta aagggttaat actcagagat 1741 cacccaaaac atttgagatg aaatatatac cacccgctta tctaacattt aatgta