Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

PREDICTED: Stomoxys calcitrans glutamate receptor ionotropic,


LOCUS       XM_013257479            2967 bp    mRNA    linear   INV 02-SEP-2023
            kainate 2 (LOC106091067), mRNA.
ACCESSION   XM_013257479
VERSION     XM_013257479.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013257479.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2967
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..2967
                     /gene="LOC106091067"
                     /note="glutamate receptor ionotropic, kainate 2; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins"
                     /db_xref="GeneID:106091067"
     CDS             100..2916
                     /gene="LOC106091067"
                     /codon_start=1
                     /product="glutamate receptor ionotropic, kainate 2"
                     /protein_id="XP_013112933.2"
                     /db_xref="GeneID:106091067"
                     /translation="MKPIVLLVLCFAIVNCQRNIEPIPKIKIGGIFYDYEFEIEEAFI
                     KTIGVVNGLSEGEFKLEPVSKHLKDSDGSMVIEKYACDLLELGVAAIFGPSSKANSDI
                     VSILSNVTGVPNLLFDAISEENEQQKAGHQLTLNVYPTQLILSKAYADIVHNFGWKKF
                     NIVYDAEDENAPMRLQDILQLRDIHHEAVRVLKFRRGDDYQVLWKGIQGDKRVILDCP
                     PELLVEVLEASIPFDLTGQFNHLFLTNLETPAGALEPLRNNETFTLNITAARLMGKDM
                     ENFLNTEFDPNNIDMPTRELLPDLIHDAIMLYFLALKEIASQYMIEEPPTYTCDTLDF
                     NGETQRWRFGEYVNRVMRQIAPLNDTLFHHGRIQFDDAGYRTHFELEIYEPLDNYGLA
                     LWNTNGHISSEHVQTNISKKIVYRVATRLGAPYFMEKEEAVAANVTGNGRYYGYAVDL
                     IDEISKEMNFEYVFVPVAGNGYGKYNKETKRWDGIIGELINNDAHMGICDLTITQARK
                     EVVDFSVPFMTLGISILAYQKPVERKSWSAFLEPFQNEVWMYVMASILVISFLYFAIS
                     RITVGDWENPHPCNKDPDTVENRWNISNSFWITIGSIMTAGCDILPIHPTMRIFTTMF
                     WIFAIILNNSYTANMAAFLTNSKMESSVNSIADLAGQAEIKFGTIEGGSTYSLFAESN
                     ETTYRLAFNRMQGADPPVYTKDNIEGVDRVLKNNGSYMFLMETTTLEYNTERNCKLKM
                     LGDIFGEKHYAIAVPFGAEYRHSLNVAILRLAEKGILPNLKKKWWTNEDTPCEHEELA
                     EKDTPDLTFDNVRGIFYTLYVGVFLAYIIGIIDFLIYSHQVAAEEGLSFKEAFIKEIT
                     FVLKFWNNKKPISAAGSSRSASRMSGGSDKSARSLSKSRKLSKSNKSSKSDKSDKSPD
                     ASQVEDAMERKSTKSLKSVVIKLK"
ORIGIN      
        1 tgtgtagacg aaattttaat ccaaaaaaca aaacgcggcc agtgaacaaa gtaataaaaa
       61 ttatatattt ttcatggtgg catcaatagc gtataaaaaa tgaaacctat agtgctgctg
      121 gtattatgct ttgcaatagt caattgccag cgtaatattg aacctattcc gaaaataaaa
      181 atagggggca tattttacga ctatgaattc gaaatcgaag aagctttcat aaaaaccatt
      241 ggagttgtta acggcctaag tgagggggag tttaagttgg aaccagttag taaacatcta
      301 aaggactctg atggttccat ggttattgaa aaatatgcat gtgatttgtt ggagctgggt
      361 gtcgcagcta tttttggacc aagttcaaag gcaaacagcg atattgtttc tattctgtcc
      421 aacgtcaccg gcgttccgaa tctcttgttt gatgccatta gtgaggaaaa cgaacagcag
      481 aaggctggtc atcagctaac gctaaatgtg tatccgaccc agctgatatt gtctaaggca
      541 tatgcagaca ttgttcataa tttcggatgg aaaaagttca acatagtcta cgacgccgaa
      601 gatgaaaatg ctcctatgag attgcaagac attttacaat taagagatat ccaccatgaa
      661 gctgttcgtg tgctaaaatt tcgtagaggc gatgactatc aagttttgtg gaagggtatt
      721 cagggcgata agagagttat attggactgc ccccctgagt tactggtcga ggtgttggag
      781 gcctctatac catttgattt gacgggacaa tttaatcatt tatttttgac aaatctagaa
      841 acaccggctg gagctttaga accattgagg aataacgaaa catttacatt aaacataact
      901 gcagcacgcc tgatggggaa ggacatggaa aatttcctaa atacggaatt tgatccaaat
      961 aacattgata tgccaacgag ggaattgcta ccggacctta tacacgacgc catcatgctt
     1021 tactttctgg cattaaagga aattgccagc caatatatga tagaggaacc acccacctat
     1081 acctgcgaca ctttggattt taatggcgaa acacagcgat ggcgttttgg cgaatatgtt
     1141 aatagagtaa tgagacagat tgcaccacta aacgatacac tatttcacca tggtcgtata
     1201 caatttgacg atgctggcta ccgaacacac tttgagttgg aaatttatga acccctggat
     1261 aattacggac tggcattgtg gaacactaat ggtcatataa gcagtgaaca tgtccaaacg
     1321 aatataagca agaaaattgt atatcgtgtg gccacacgct tgggtgctcc ctactttatg
     1381 gaaaaagaag aagcggtagc tgccaatgtt acaggcaatg gccgttatta tggctatgct
     1441 gtggacttaa ttgacgagat ttcaaaggaa atgaactttg aatatgtgtt tgtaccagtt
     1501 gctggcaatg gctatggcaa atataataag gaaaccaaac gatgggatgg cattatagga
     1561 gagcttatta ataatgatgc tcacatggga atatgcgact tgacaatcac acaagcccgc
     1621 aaagaagtgg tggattttag tgttcctttt atgacactag gtataagcat tttagcttac
     1681 cagaaacccg tggagagaaa atcgtggagt gcatttctag agccgtttca aaatgaggtg
     1741 tggatgtatg tgatggcatc tattttagtt atttcatttc tgtactttgc catatccaga
     1801 ataactgtag gtgattggga aaacccccat ccttgtaaca aagaccctga cactgttgaa
     1861 aatcgttgga atatatcgaa tagtttctgg ataaccatag gttccattat gaccgctggc
     1921 tgtgatattt taccaataca tcccacaatg cgcatattta ccacaatgtt ttggattttc
     1981 gccattatcc ttaataactc ctacaccgct aacatggctg cctttttgac caacagcaaa
     2041 atggaaagtt ccgtaaatag cattgccgat ctggccggac aggcggaaat aaaattcggt
     2101 accattgagg gtggcagcac ttattcttta tttgccgaat cgaatgaaac aacttatcgc
     2161 ttagctttta acagaatgca aggtgcagat ccaccggtgt ataccaaaga caatattgag
     2221 ggagtagatc gagtgctgaa gaacaacgga agctatatgt tcttaatgga gaccaccact
     2281 ttggagtata acacagaaag aaattgtaaa ttgaaaatgt tgggtgatat atttggtgag
     2341 aagcattatg ccatagcagt gccgtttgga gccgaatacc gccattcgtt aaatgtggcc
     2401 attcttagat tggccgaaaa gggtatatta ccaaacttaa aaaagaaatg gtggactaat
     2461 gaagatacac cctgtgagca cgaagaactg gctgagaagg atacgcccga tttaaccttt
     2521 gataatgtaa ggggtatatt ttataccctc tatgtgggtg tgtttttggc ctatatcatt
     2581 ggtatcatcg attttctaat ctatagccat caagtggctg ccgaggaggg cctttcgttt
     2641 aaggaggctt ttatcaagga aattacgttt gttttaaaat tctggaataa caagaaaccc
     2701 atttcagcgg ctggtagttc gcgttcagct tcacgaatgt caggcggaag tgacaaatcg
     2761 gccagatcat tgtccaagtc cagaaaattg tccaagtcaa ataagtcttc gaaatctgac
     2821 aaatcggata aatcaccaga tgcctctcaa gtggaagatg ctatggagag aaaaagtact
     2881 aaaagtttga aaagtgtggt gataaaactt aaataattgt agttttattt ggtccacatt
     2941 ctggaaactt acaacaacca gaataaa