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LOCUS XM_013256432 3172 bp mRNA linear INV 02-SEP-2023 chain (LOC106090288), transcript variant X13, mRNA. ACCESSION XM_013256432 VERSION XM_013256432.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013256432.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3172 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3172 /gene="LOC106090288" /note="cytoplasmic dynein 1 intermediate chain; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins" /db_xref="GeneID:106090288" CDS 204..2111 /gene="LOC106090288" /codon_start=1 /product="cytoplasmic dynein 1 intermediate chain isoform X12" /protein_id="XP_013111886.2" /db_xref="GeneID:106090288" /translation="MDRKAELERKKARLAALREEKDRRRREKEMKDMEELAVRSSEKD QRKDLDEMLSSLGVAPVSEVLTSLSSVNSLNSDNSNTQTPDVSLQTNMNGTSAGKKPL NLSVYSVQATNIPPKETLTYSKQTQTQSTGGHERDAHATDYYDEYNLNPGLEWEDEFT DDEESSLPHMDGFTSKLPPGYLTHGLPTVKDVAPAITPMEQKKEQEEKKEIKELSEEQ KQMIILSEDFQKFVLRAGRFMERALSENVDIYLDYIGGGDNEEANDEKSHARLSLNRV FYDDRWSKNRCITCMDWSTHFPELVAASYHNNEESPNEPDGVVMVWNTKFKKQTPEDV FHCQSAVMSTCFAKFNPNLILGGTYSGQVVLWDNRVQKRTPIQRTPLSAAAHTHPVYC LQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTLELQQSQKKPIAITCMAFPANEI NSLVMGSEDGYVYSASRHGLRSGVNETFEKHIGPVTGISTHYNQSSPDFGHLFLTSSI DWTIKLWSLKDTKPLYSFEDNSDYVMDVAWSPIHPALFAAVDGSGRLDLWNLNQDTEV PTASVIVDGAPALNRVSWMANGHHVTVGDDSGRLYVYDVAEHLAQPSRDEWSRFNATL NELKMNQSDEV" polyA_site 3172 /gene="LOC106090288" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tattgaaata atcaatactt cacaactcta ggaaactcgc aaaagtattg tgcacggaaa 61 aatatgtggt tttaagtact taatcgaagc ataaatatat aaatttcata tcgaaaagct 121 gcaaagagaa caccgccaag tttgagatta tctaaagatc ataaacccct ctaaacacca 181 aaagtcacaa aaatcctaaa gacatggatc gcaaagctga attggagcgc aagaaagcca 241 ggttagcggc tttgcgcgaa gaaaaagaca gacgtcggcg tgaaaaagaa atgaaagata 301 tggaggaact tgctgtaaga agctcagaaa aggatcaaag aaaggatttg gatgaaatgc 361 tttcttcatt gggtgtggca ccagtttctg aagttcttac ttcattgtct tcggtaaatt 421 cattgaattc ggacaactct aatactcaga caccagatgt cagtctgcaa acgaatatga 481 atggcactag tgctggcaag aaacccttaa acttgagtgt ctatagtgtt caggccacta 541 acattccacc aaaagaaaca ctcacctatt ctaaacagac ccaaacacaa agtaccggtg 601 gccatgagcg tgatgctcat gctacggact attatgatga atacaatctt aatccgggtt 661 tagaatggga ggatgagttc acagatgacg aagagagttc gctgccacac atggatggat 721 tcacctcgaa gttaccgcct ggctatttga cacatggtct gcccacagtg aaagatgttg 781 caccggccat aacgcccatg gaacaaaaga aggagcaaga ggagaagaaa gagatcaagg 841 aactgtcgga ggaacaaaaa caaatgatca tcttatctga ggacttccaa aagtttgttt 901 tgcgtgctgg ccgttttatg gagcgggctc tctcagagaa tgtcgacatc tatttggatt 961 acattggcgg tggtgacaat gaggaggcta atgatgagaa atctcatgca cgtttatcat 1021 tgaatcgcgt tttctatgat gatcgctggt cgaaaaatcg ttgcataaca tgcatggatt 1081 ggtctacgca ttttccggaa ttggtggcag cttcctatca taacaatgaa gaaagtccta 1141 acgaacccga cggtgttgtt atggtctgga ataccaaatt taagaaacaa acccccgaag 1201 atgttttcca ttgtcaaagt gctgttatgt ccacatgttt tgctaaattc aatcccaatc 1261 tcattttggg tggcacctat tccggtcaag tagttctgtg ggataatcgt gtacagaaac 1321 gtacacccat tcaacgtacc cctctgagtg ctgctgctca cacacatcca gtgtattgtt 1381 tgcaaatggt gggaacacaa aatgctcaca atgtcatctc aatatcatcc gatggcaaat 1441 tgtgttcgtg gagtttggat atgttgtcac aacctcagga tacgttagaa ttgcaacaga 1501 gccagaagaa acctattgcc attacgtgta tggcatttcc ggctaatgag attaacagtt 1561 tggtgatggg cagtgaagat ggttatgttt actcagcttc tcgccatggc ttgagatctg 1621 gtgtaaatga gacatttgag aagcatatcg gtcctgtcac tggcatttct actcactaca 1681 atcaatcatc acctgatttt ggccatttgt tccttacctc atccatcgat tggacaatca 1741 aattgtggtc gctgaaggac accaaaccgc tgtactcatt cgaggacaat tccgattatg 1801 ttatggatgt ggcctggtct cccattcatc ctgctctgtt tgctgctgtc gatggtagcg 1861 gccgccttga tttatggaat ctaaatcaag acaccgaagt acccacagca tcggttattg 1921 ttgatggtgc gccagctctc aatcgtgtat cgtggatggc aaatggccat catgtgactg 1981 tgggcgatga cagtggccgc ctgtatgtct atgatgtggc tgagcatttg gcccaaccat 2041 cgcgggatga atggtctaga tttaatgcca cactcaacga gctcaaaatg aatcaaagcg 2101 acgaggttta agcacacaca cacacaaaca caaaatgtgg gggactttgt taagtcctgc 2161 tactacaatt ctatttacag ctttaaaaag actataccta aagttgttta aatggcaatt 2221 ttacttttgc attagcatta tctcttcaat ttatgctttc tttaactcta tccccccacc 2281 ctccaactgt ctccctctaa actacataaa tgagttttct agaaatattg tcttaactct 2341 ctacttctat ccattagtca tgccctatat aaaaaaaatc gcggttttca tttttctttc 2401 attttttaag gtttgtggct gggtttactt ttctccaagg atcattgatt tggtgttgat 2461 gattttgtga ggaaaagcct acccagtttc actccttagt agttgtatat tttaattttt 2521 ctctttgtat taaacatccc ccttggtttt taagtattac aaaataagtt catttgaaat 2581 gaaaaaagat ttaactaact gtgtattaaa taaactatgt atgataaatt tgttaaacaa 2641 ttttatttta tttatgtttt tatatatgtg aattttattt aacacaagaa aagaaagaaa 2701 aagcaacaac aaaaaatctc cgatattatc tttttacaga cacttgtttt catttactct 2761 attctaaatt aattttttta tggtacatat atacatatat aaataaatat atttaattat 2821 acaaggctgt aaccacctgt ggttgtggcc aacaaattta tattaacccc gccctcactc 2881 cccatggaac aaacaatgaa acaaatatga actttatggc agttttctct aagaaatcat 2941 agtggaagag tttttttcgt ttttggttaa gaaattgcat taagtacgat tgtcaagacc 3001 ctaaactaat gattaataat aattgtatgg agttatggac agttaataag gcgtacgtcg 3061 agtacacagt aagatagtcg tctacatacg aaaaagaaaa cactacacaa aatatttatt 3121 gaaactaatc taataaatat accagcatat ggaaattatt ggaaattatt aa