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LOCUS XM_013256431 3181 bp mRNA linear INV 02-SEP-2023 chain (LOC106090288), transcript variant X11, mRNA. ACCESSION XM_013256431 VERSION XM_013256431.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013256431.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3181 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3181 /gene="LOC106090288" /note="cytoplasmic dynein 1 intermediate chain; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins" /db_xref="GeneID:106090288" CDS 204..2120 /gene="LOC106090288" /codon_start=1 /product="cytoplasmic dynein 1 intermediate chain isoform X10" /protein_id="XP_013111885.2" /db_xref="GeneID:106090288" /translation="MDRKAELERKKARLAALREEKDRRRREKEMKDMEELAVRSSEKD QRKDLDEMLSSLGVAPVSEVLTSLSSVNSLNSDNSNTQTPDVSLQTNMNGTSAGKKPL NLSVYSVQATNIPPKETLTYSKQTQTQSTGGHERDGYMEDWWRPRKAHATDYYVLAFD AQGDDEESSLPHMDGFTSKLPPGYLTHGLPTVKDVAPAITPMEQKKEQEEKKEIKELS EEQKQMIILSEDFQKFVLRAGRFMERALSENVDIYLDYIGGGDNEEANDEKSHARLSL NRVFYDDRWSKNRCITCMDWSTHFPELVAASYHNNEESPNEPDGVVMVWNTKFKKQTP EDVFHCQSAVMSTCFAKFNPNLILGGTYSGQVVLWDNRVQKRTPIQRTPLSAAAHTHP VYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTLELQQSQKKPIAITCMAFPA NEINSLVMGSEDGYVYSASRHGLRSGVNETFEKHIGPVTGISTHYNQSSPDFGHLFLT SSIDWTIKLWSLKDTKPLYSFEDNSDYVMDVAWSPIHPALFAAVDGSGRLDLWNLNQD TEVPTASVIVDGAPALNRVSWMANGHHVTVGDDSGRLYVYDVAEHLAQPSRDEWSRFN ATLNELKMNQSDEV" polyA_site 3181 /gene="LOC106090288" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tattgaaata atcaatactt cacaactcta ggaaactcgc aaaagtattg tgcacggaaa 61 aatatgtggt tttaagtact taatcgaagc ataaatatat aaatttcata tcgaaaagct 121 gcaaagagaa caccgccaag tttgagatta tctaaagatc ataaacccct ctaaacacca 181 aaagtcacaa aaatcctaaa gacatggatc gcaaagctga attggagcgc aagaaagcca 241 ggttagcggc tttgcgcgaa gaaaaagaca gacgtcggcg tgaaaaagaa atgaaagata 301 tggaggaact tgctgtaaga agctcagaaa aggatcaaag aaaggatttg gatgaaatgc 361 tttcttcatt gggtgtggca ccagtttctg aagttcttac ttcattgtct tcggtaaatt 421 cattgaattc ggacaactct aatactcaga caccagatgt cagtctgcaa acgaatatga 481 atggcactag tgctggcaag aaacccttaa acttgagtgt ctatagtgtt caggccacta 541 acattccacc aaaagaaaca ctcacctatt ctaaacagac ccaaacacaa agtaccggtg 601 gccatgagcg tgatggatat atggaggatt ggtggagacc acgcaaagct catgctacgg 661 actattatgt gcttgcattt gatgcccaag gagatgacga agagagttcg ctgccacaca 721 tggatggatt cacctcgaag ttaccgcctg gctatttgac acatggtctg cccacagtga 781 aagatgttgc accggccata acgcccatgg aacaaaagaa ggagcaagag gagaagaaag 841 agatcaagga actgtcggag gaacaaaaac aaatgatcat cttatctgag gacttccaaa 901 agtttgtttt gcgtgctggc cgttttatgg agcgggctct ctcagagaat gtcgacatct 961 atttggatta cattggcggt ggtgacaatg aggaggctaa tgatgagaaa tctcatgcac 1021 gtttatcatt gaatcgcgtt ttctatgatg atcgctggtc gaaaaatcgt tgcataacat 1081 gcatggattg gtctacgcat tttccggaat tggtggcagc ttcctatcat aacaatgaag 1141 aaagtcctaa cgaacccgac ggtgttgtta tggtctggaa taccaaattt aagaaacaaa 1201 cccccgaaga tgttttccat tgtcaaagtg ctgttatgtc cacatgtttt gctaaattca 1261 atcccaatct cattttgggt ggcacctatt ccggtcaagt agttctgtgg gataatcgtg 1321 tacagaaacg tacacccatt caacgtaccc ctctgagtgc tgctgctcac acacatccag 1381 tgtattgttt gcaaatggtg ggaacacaaa atgctcacaa tgtcatctca atatcatccg 1441 atggcaaatt gtgttcgtgg agtttggata tgttgtcaca acctcaggat acgttagaat 1501 tgcaacagag ccagaagaaa cctattgcca ttacgtgtat ggcatttccg gctaatgaga 1561 ttaacagttt ggtgatgggc agtgaagatg gttatgttta ctcagcttct cgccatggct 1621 tgagatctgg tgtaaatgag acatttgaga agcatatcgg tcctgtcact ggcatttcta 1681 ctcactacaa tcaatcatca cctgattttg gccatttgtt ccttacctca tccatcgatt 1741 ggacaatcaa attgtggtcg ctgaaggaca ccaaaccgct gtactcattc gaggacaatt 1801 ccgattatgt tatggatgtg gcctggtctc ccattcatcc tgctctgttt gctgctgtcg 1861 atggtagcgg ccgccttgat ttatggaatc taaatcaaga caccgaagta cccacagcat 1921 cggttattgt tgatggtgcg ccagctctca atcgtgtatc gtggatggca aatggccatc 1981 atgtgactgt gggcgatgac agtggccgcc tgtatgtcta tgatgtggct gagcatttgg 2041 cccaaccatc gcgggatgaa tggtctagat ttaatgccac actcaacgag ctcaaaatga 2101 atcaaagcga cgaggtttaa gcacacacac acacaaacac aaaatgtggg ggactttgtt 2161 aagtcctgct actacaattc tatttacagc tttaaaaaga ctatacctaa agttgtttaa 2221 atggcaattt tacttttgca ttagcattat ctcttcaatt tatgctttct ttaactctat 2281 ccccccaccc tccaactgtc tccctctaaa ctacataaat gagttttcta gaaatattgt 2341 cttaactctc tacttctatc cattagtcat gccctatata aaaaaaatcg cggttttcat 2401 ttttctttca ttttttaagg tttgtggctg ggtttacttt tctccaagga tcattgattt 2461 ggtgttgatg attttgtgag gaaaagccta cccagtttca ctccttagta gttgtatatt 2521 ttaatttttc tctttgtatt aaacatcccc cttggttttt aagtattaca aaataagttc 2581 atttgaaatg aaaaaagatt taactaactg tgtattaaat aaactatgta tgataaattt 2641 gttaaacaat tttattttat ttatgttttt atatatgtga attttattta acacaagaaa 2701 agaaagaaaa agcaacaaca aaaaatctcc gatattatct ttttacagac acttgttttc 2761 atttactcta ttctaaatta atttttttat ggtacatata tacatatata aataaatata 2821 tttaattata caaggctgta accacctgtg gttgtggcca acaaatttat attaaccccg 2881 ccctcactcc ccatggaaca aacaatgaaa caaatatgaa ctttatggca gttttctcta 2941 agaaatcata gtggaagagt ttttttcgtt tttggttaag aaattgcatt aagtacgatt 3001 gtcaagaccc taaactaatg attaataata attgtatgga gttatggaca gttaataagg 3061 cgtacgtcga gtacacagta agatagtcgt ctacatacga aaaagaaaac actacacaaa 3121 atatttattg aaactaatct aataaatata ccagcatatg gaaattattg gaaattatta 3181 a