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LOCUS XM_013256430 3196 bp mRNA linear INV 02-SEP-2023 chain (LOC106090288), transcript variant X9, mRNA. ACCESSION XM_013256430 VERSION XM_013256430.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013256430.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3196 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3196 /gene="LOC106090288" /note="cytoplasmic dynein 1 intermediate chain; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins" /db_xref="GeneID:106090288" CDS 204..2135 /gene="LOC106090288" /codon_start=1 /product="cytoplasmic dynein 1 intermediate chain isoform X8" /protein_id="XP_013111884.2" /db_xref="GeneID:106090288" /translation="MDRKAELERKKARLAALREEKDRRRREKEMKDMEELAVRSSEKD QRKDLDEMLSSLGVAPVSEVLTSLSSVNSLNSDNSNTQTPDVSLQTNMNGTSAGKKPL NLSVYSVQATNIPPKETLTYSKQTQTQSTGGHERDAHATDYYDEYNLNPGLEWEDEFT VLAFDAQGDDEESSLPHMDGFTSKLPPGYLTHGLPTVKDVAPAITPMEQKKEQEEKKE IKELSEEQKQMIILSEDFQKFVLRAGRFMERALSENVDIYLDYIGGGDNEEANDEKSH ARLSLNRVFYDDRWSKNRCITCMDWSTHFPELVAASYHNNEESPNEPDGVVMVWNTKF KKQTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQVVLWDNRVQKRTPIQRTPLSAA AHTHPVYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTLELQQSQKKPIAITC MAFPANEINSLVMGSEDGYVYSASRHGLRSGVNETFEKHIGPVTGISTHYNQSSPDFG HLFLTSSIDWTIKLWSLKDTKPLYSFEDNSDYVMDVAWSPIHPALFAAVDGSGRLDLW NLNQDTEVPTASVIVDGAPALNRVSWMANGHHVTVGDDSGRLYVYDVAEHLAQPSRDE WSRFNATLNELKMNQSDEV" polyA_site 3196 /gene="LOC106090288" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tattgaaata atcaatactt cacaactcta ggaaactcgc aaaagtattg tgcacggaaa 61 aatatgtggt tttaagtact taatcgaagc ataaatatat aaatttcata tcgaaaagct 121 gcaaagagaa caccgccaag tttgagatta tctaaagatc ataaacccct ctaaacacca 181 aaagtcacaa aaatcctaaa gacatggatc gcaaagctga attggagcgc aagaaagcca 241 ggttagcggc tttgcgcgaa gaaaaagaca gacgtcggcg tgaaaaagaa atgaaagata 301 tggaggaact tgctgtaaga agctcagaaa aggatcaaag aaaggatttg gatgaaatgc 361 tttcttcatt gggtgtggca ccagtttctg aagttcttac ttcattgtct tcggtaaatt 421 cattgaattc ggacaactct aatactcaga caccagatgt cagtctgcaa acgaatatga 481 atggcactag tgctggcaag aaacccttaa acttgagtgt ctatagtgtt caggccacta 541 acattccacc aaaagaaaca ctcacctatt ctaaacagac ccaaacacaa agtaccggtg 601 gccatgagcg tgatgctcat gctacggact attatgatga atacaatctt aatccgggtt 661 tagaatggga ggatgagttc acagtgcttg catttgatgc ccaaggagat gacgaagaga 721 gttcgctgcc acacatggat ggattcacct cgaagttacc gcctggctat ttgacacatg 781 gtctgcccac agtgaaagat gttgcaccgg ccataacgcc catggaacaa aagaaggagc 841 aagaggagaa gaaagagatc aaggaactgt cggaggaaca aaaacaaatg atcatcttat 901 ctgaggactt ccaaaagttt gttttgcgtg ctggccgttt tatggagcgg gctctctcag 961 agaatgtcga catctatttg gattacattg gcggtggtga caatgaggag gctaatgatg 1021 agaaatctca tgcacgttta tcattgaatc gcgttttcta tgatgatcgc tggtcgaaaa 1081 atcgttgcat aacatgcatg gattggtcta cgcattttcc ggaattggtg gcagcttcct 1141 atcataacaa tgaagaaagt cctaacgaac ccgacggtgt tgttatggtc tggaatacca 1201 aatttaagaa acaaaccccc gaagatgttt tccattgtca aagtgctgtt atgtccacat 1261 gttttgctaa attcaatccc aatctcattt tgggtggcac ctattccggt caagtagttc 1321 tgtgggataa tcgtgtacag aaacgtacac ccattcaacg tacccctctg agtgctgctg 1381 ctcacacaca tccagtgtat tgtttgcaaa tggtgggaac acaaaatgct cacaatgtca 1441 tctcaatatc atccgatggc aaattgtgtt cgtggagttt ggatatgttg tcacaacctc 1501 aggatacgtt agaattgcaa cagagccaga agaaacctat tgccattacg tgtatggcat 1561 ttccggctaa tgagattaac agtttggtga tgggcagtga agatggttat gtttactcag 1621 cttctcgcca tggcttgaga tctggtgtaa atgagacatt tgagaagcat atcggtcctg 1681 tcactggcat ttctactcac tacaatcaat catcacctga ttttggccat ttgttcctta 1741 cctcatccat cgattggaca atcaaattgt ggtcgctgaa ggacaccaaa ccgctgtact 1801 cattcgagga caattccgat tatgttatgg atgtggcctg gtctcccatt catcctgctc 1861 tgtttgctgc tgtcgatggt agcggccgcc ttgatttatg gaatctaaat caagacaccg 1921 aagtacccac agcatcggtt attgttgatg gtgcgccagc tctcaatcgt gtatcgtgga 1981 tggcaaatgg ccatcatgtg actgtgggcg atgacagtgg ccgcctgtat gtctatgatg 2041 tggctgagca tttggcccaa ccatcgcggg atgaatggtc tagatttaat gccacactca 2101 acgagctcaa aatgaatcaa agcgacgagg tttaagcaca cacacacaca aacacaaaat 2161 gtgggggact ttgttaagtc ctgctactac aattctattt acagctttaa aaagactata 2221 cctaaagttg tttaaatggc aattttactt ttgcattagc attatctctt caatttatgc 2281 tttctttaac tctatccccc caccctccaa ctgtctccct ctaaactaca taaatgagtt 2341 ttctagaaat attgtcttaa ctctctactt ctatccatta gtcatgccct atataaaaaa 2401 aatcgcggtt ttcatttttc tttcattttt taaggtttgt ggctgggttt acttttctcc 2461 aaggatcatt gatttggtgt tgatgatttt gtgaggaaaa gcctacccag tttcactcct 2521 tagtagttgt atattttaat ttttctcttt gtattaaaca tcccccttgg tttttaagta 2581 ttacaaaata agttcatttg aaatgaaaaa agatttaact aactgtgtat taaataaact 2641 atgtatgata aatttgttaa acaattttat tttatttatg tttttatata tgtgaatttt 2701 atttaacaca agaaaagaaa gaaaaagcaa caacaaaaaa tctccgatat tatcttttta 2761 cagacacttg ttttcattta ctctattcta aattaatttt tttatggtac atatatacat 2821 atataaataa atatatttaa ttatacaagg ctgtaaccac ctgtggttgt ggccaacaaa 2881 tttatattaa ccccgccctc actccccatg gaacaaacaa tgaaacaaat atgaacttta 2941 tggcagtttt ctctaagaaa tcatagtgga agagtttttt tcgtttttgg ttaagaaatt 3001 gcattaagta cgattgtcaa gaccctaaac taatgattaa taataattgt atggagttat 3061 ggacagttaa taaggcgtac gtcgagtaca cagtaagata gtcgtctaca tacgaaaaag 3121 aaaacactac acaaaatatt tattgaaact aatctaataa atataccagc atatggaaat 3181 tattggaaat tattaa