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LOCUS XM_013256427 3211 bp mRNA linear INV 02-SEP-2023 chain (LOC106090288), transcript variant X6, mRNA. ACCESSION XM_013256427 VERSION XM_013256427.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013256427.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3211 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3211 /gene="LOC106090288" /note="cytoplasmic dynein 1 intermediate chain; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins" /db_xref="GeneID:106090288" CDS 204..2150 /gene="LOC106090288" /codon_start=1 /product="cytoplasmic dynein 1 intermediate chain isoform X5" /protein_id="XP_013111881.2" /db_xref="GeneID:106090288" /translation="MDRKAELERKKARLAALREEKDRRRREKEMKDMEELAVRSSEKD QRKDLDEMLSSLGVAPVSEVLTSLSSVNSLNSDNSNTQTPDVSLQTNMNGTSAGKKPL NLSVYSVQATNIPPKETLTYSKQTQTQSTGGHERDVLSCHSSPLSGYMEDWWRPRKAH ATDYYVLAFDAQGDDEESSLPHMDGFTSKLPPGYLTHGLPTVKDVAPAITPMEQKKEQ EEKKEIKELSEEQKQMIILSEDFQKFVLRAGRFMERALSENVDIYLDYIGGGDNEEAN DEKSHARLSLNRVFYDDRWSKNRCITCMDWSTHFPELVAASYHNNEESPNEPDGVVMV WNTKFKKQTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQVVLWDNRVQKRTPIQRT PLSAAAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTLELQQSQKKP IAITCMAFPANEINSLVMGSEDGYVYSASRHGLRSGVNETFEKHIGPVTGISTHYNQS SPDFGHLFLTSSIDWTIKLWSLKDTKPLYSFEDNSDYVMDVAWSPIHPALFAAVDGSG RLDLWNLNQDTEVPTASVIVDGAPALNRVSWMANGHHVTVGDDSGRLYVYDVAEHLAQ PSRDEWSRFNATLNELKMNQSDEV" polyA_site 3211 /gene="LOC106090288" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tattgaaata atcaatactt cacaactcta ggaaactcgc aaaagtattg tgcacggaaa 61 aatatgtggt tttaagtact taatcgaagc ataaatatat aaatttcata tcgaaaagct 121 gcaaagagaa caccgccaag tttgagatta tctaaagatc ataaacccct ctaaacacca 181 aaagtcacaa aaatcctaaa gacatggatc gcaaagctga attggagcgc aagaaagcca 241 ggttagcggc tttgcgcgaa gaaaaagaca gacgtcggcg tgaaaaagaa atgaaagata 301 tggaggaact tgctgtaaga agctcagaaa aggatcaaag aaaggatttg gatgaaatgc 361 tttcttcatt gggtgtggca ccagtttctg aagttcttac ttcattgtct tcggtaaatt 421 cattgaattc ggacaactct aatactcaga caccagatgt cagtctgcaa acgaatatga 481 atggcactag tgctggcaag aaacccttaa acttgagtgt ctatagtgtt caggccacta 541 acattccacc aaaagaaaca ctcacctatt ctaaacagac ccaaacacaa agtaccggtg 601 gccatgagcg tgatgttctt tcttgccact cctcacctct gtcaggatat atggaggatt 661 ggtggagacc acgcaaagct catgctacgg actattatgt gcttgcattt gatgcccaag 721 gagatgacga agagagttcg ctgccacaca tggatggatt cacctcgaag ttaccgcctg 781 gctatttgac acatggtctg cccacagtga aagatgttgc accggccata acgcccatgg 841 aacaaaagaa ggagcaagag gagaagaaag agatcaagga actgtcggag gaacaaaaac 901 aaatgatcat cttatctgag gacttccaaa agtttgtttt gcgtgctggc cgttttatgg 961 agcgggctct ctcagagaat gtcgacatct atttggatta cattggcggt ggtgacaatg 1021 aggaggctaa tgatgagaaa tctcatgcac gtttatcatt gaatcgcgtt ttctatgatg 1081 atcgctggtc gaaaaatcgt tgcataacat gcatggattg gtctacgcat tttccggaat 1141 tggtggcagc ttcctatcat aacaatgaag aaagtcctaa cgaacccgac ggtgttgtta 1201 tggtctggaa taccaaattt aagaaacaaa cccccgaaga tgttttccat tgtcaaagtg 1261 ctgttatgtc cacatgtttt gctaaattca atcccaatct cattttgggt ggcacctatt 1321 ccggtcaagt agttctgtgg gataatcgtg tacagaaacg tacacccatt caacgtaccc 1381 ctctgagtgc tgctgctcac acacatccag tgtattgttt gcaaatggtg ggaacacaaa 1441 atgctcacaa tgtcatctca atatcatccg atggcaaatt gtgttcgtgg agtttggata 1501 tgttgtcaca acctcaggat acgttagaat tgcaacagag ccagaagaaa cctattgcca 1561 ttacgtgtat ggcatttccg gctaatgaga ttaacagttt ggtgatgggc agtgaagatg 1621 gttatgttta ctcagcttct cgccatggct tgagatctgg tgtaaatgag acatttgaga 1681 agcatatcgg tcctgtcact ggcatttcta ctcactacaa tcaatcatca cctgattttg 1741 gccatttgtt ccttacctca tccatcgatt ggacaatcaa attgtggtcg ctgaaggaca 1801 ccaaaccgct gtactcattc gaggacaatt ccgattatgt tatggatgtg gcctggtctc 1861 ccattcatcc tgctctgttt gctgctgtcg atggtagcgg ccgccttgat ttatggaatc 1921 taaatcaaga caccgaagta cccacagcat cggttattgt tgatggtgcg ccagctctca 1981 atcgtgtatc gtggatggca aatggccatc atgtgactgt gggcgatgac agtggccgcc 2041 tgtatgtcta tgatgtggct gagcatttgg cccaaccatc gcgggatgaa tggtctagat 2101 ttaatgccac actcaacgag ctcaaaatga atcaaagcga cgaggtttaa gcacacacac 2161 acacaaacac aaaatgtggg ggactttgtt aagtcctgct actacaattc tatttacagc 2221 tttaaaaaga ctatacctaa agttgtttaa atggcaattt tacttttgca ttagcattat 2281 ctcttcaatt tatgctttct ttaactctat ccccccaccc tccaactgtc tccctctaaa 2341 ctacataaat gagttttcta gaaatattgt cttaactctc tacttctatc cattagtcat 2401 gccctatata aaaaaaatcg cggttttcat ttttctttca ttttttaagg tttgtggctg 2461 ggtttacttt tctccaagga tcattgattt ggtgttgatg attttgtgag gaaaagccta 2521 cccagtttca ctccttagta gttgtatatt ttaatttttc tctttgtatt aaacatcccc 2581 cttggttttt aagtattaca aaataagttc atttgaaatg aaaaaagatt taactaactg 2641 tgtattaaat aaactatgta tgataaattt gttaaacaat tttattttat ttatgttttt 2701 atatatgtga attttattta acacaagaaa agaaagaaaa agcaacaaca aaaaatctcc 2761 gatattatct ttttacagac acttgttttc atttactcta ttctaaatta atttttttat 2821 ggtacatata tacatatata aataaatata tttaattata caaggctgta accacctgtg 2881 gttgtggcca acaaatttat attaaccccg ccctcactcc ccatggaaca aacaatgaaa 2941 caaatatgaa ctttatggca gttttctcta agaaatcata gtggaagagt ttttttcgtt 3001 tttggttaag aaattgcatt aagtacgatt gtcaagaccc taaactaatg attaataata 3061 attgtatgga gttatggaca gttaataagg cgtacgtcga gtacacagta agatagtcgt 3121 ctacatacga aaaagaaaac actacacaaa atatttattg aaactaatct aataaatata 3181 ccagcatatg gaaattattg gaaattatta a