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LOCUS XM_013256426 3229 bp mRNA linear INV 02-SEP-2023 chain (LOC106090288), transcript variant X5, mRNA. ACCESSION XM_013256426 VERSION XM_013256426.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013256426.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3229 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3229 /gene="LOC106090288" /note="cytoplasmic dynein 1 intermediate chain; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins" /db_xref="GeneID:106090288" CDS 204..2168 /gene="LOC106090288" /codon_start=1 /product="cytoplasmic dynein 1 intermediate chain isoform X4" /protein_id="XP_013111880.2" /db_xref="GeneID:106090288" /translation="MDRKAELERKKARLAALREEKDRRRREKEMKDMEELAVRSSEKD QRKDLDEMLSSLGVAPVSEVLTSLSSVNSLNSDNSNTQTPDVSLQTNMNGTSAGKKPL NLSVYSVQATNIPPKETLTYSKQTQTQSTGGHERDGYMEDWWRPRKAHATDYYDEYNL NPGLEWEDEFTVLAFDAQGDDEESSLPHMDGFTSKLPPGYLTHGLPTVKDVAPAITPM EQKKEQEEKKEIKELSEEQKQMIILSEDFQKFVLRAGRFMERALSENVDIYLDYIGGG DNEEANDEKSHARLSLNRVFYDDRWSKNRCITCMDWSTHFPELVAASYHNNEESPNEP DGVVMVWNTKFKKQTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQVVLWDNRVQKR TPIQRTPLSAAAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTLELQ QSQKKPIAITCMAFPANEINSLVMGSEDGYVYSASRHGLRSGVNETFEKHIGPVTGIS THYNQSSPDFGHLFLTSSIDWTIKLWSLKDTKPLYSFEDNSDYVMDVAWSPIHPALFA AVDGSGRLDLWNLNQDTEVPTASVIVDGAPALNRVSWMANGHHVTVGDDSGRLYVYDV AEHLAQPSRDEWSRFNATLNELKMNQSDEV" polyA_site 3229 /gene="LOC106090288" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tattgaaata atcaatactt cacaactcta ggaaactcgc aaaagtattg tgcacggaaa 61 aatatgtggt tttaagtact taatcgaagc ataaatatat aaatttcata tcgaaaagct 121 gcaaagagaa caccgccaag tttgagatta tctaaagatc ataaacccct ctaaacacca 181 aaagtcacaa aaatcctaaa gacatggatc gcaaagctga attggagcgc aagaaagcca 241 ggttagcggc tttgcgcgaa gaaaaagaca gacgtcggcg tgaaaaagaa atgaaagata 301 tggaggaact tgctgtaaga agctcagaaa aggatcaaag aaaggatttg gatgaaatgc 361 tttcttcatt gggtgtggca ccagtttctg aagttcttac ttcattgtct tcggtaaatt 421 cattgaattc ggacaactct aatactcaga caccagatgt cagtctgcaa acgaatatga 481 atggcactag tgctggcaag aaacccttaa acttgagtgt ctatagtgtt caggccacta 541 acattccacc aaaagaaaca ctcacctatt ctaaacagac ccaaacacaa agtaccggtg 601 gccatgagcg tgatggatat atggaggatt ggtggagacc acgcaaagct catgctacgg 661 actattatga tgaatacaat cttaatccgg gtttagaatg ggaggatgag ttcacagtgc 721 ttgcatttga tgcccaagga gatgacgaag agagttcgct gccacacatg gatggattca 781 cctcgaagtt accgcctggc tatttgacac atggtctgcc cacagtgaaa gatgttgcac 841 cggccataac gcccatggaa caaaagaagg agcaagagga gaagaaagag atcaaggaac 901 tgtcggagga acaaaaacaa atgatcatct tatctgagga cttccaaaag tttgttttgc 961 gtgctggccg ttttatggag cgggctctct cagagaatgt cgacatctat ttggattaca 1021 ttggcggtgg tgacaatgag gaggctaatg atgagaaatc tcatgcacgt ttatcattga 1081 atcgcgtttt ctatgatgat cgctggtcga aaaatcgttg cataacatgc atggattggt 1141 ctacgcattt tccggaattg gtggcagctt cctatcataa caatgaagaa agtcctaacg 1201 aacccgacgg tgttgttatg gtctggaata ccaaatttaa gaaacaaacc cccgaagatg 1261 ttttccattg tcaaagtgct gttatgtcca catgttttgc taaattcaat cccaatctca 1321 ttttgggtgg cacctattcc ggtcaagtag ttctgtggga taatcgtgta cagaaacgta 1381 cacccattca acgtacccct ctgagtgctg ctgctcacac acatccagtg tattgtttgc 1441 aaatggtggg aacacaaaat gctcacaatg tcatctcaat atcatccgat ggcaaattgt 1501 gttcgtggag tttggatatg ttgtcacaac ctcaggatac gttagaattg caacagagcc 1561 agaagaaacc tattgccatt acgtgtatgg catttccggc taatgagatt aacagtttgg 1621 tgatgggcag tgaagatggt tatgtttact cagcttctcg ccatggcttg agatctggtg 1681 taaatgagac atttgagaag catatcggtc ctgtcactgg catttctact cactacaatc 1741 aatcatcacc tgattttggc catttgttcc ttacctcatc catcgattgg acaatcaaat 1801 tgtggtcgct gaaggacacc aaaccgctgt actcattcga ggacaattcc gattatgtta 1861 tggatgtggc ctggtctccc attcatcctg ctctgtttgc tgctgtcgat ggtagcggcc 1921 gccttgattt atggaatcta aatcaagaca ccgaagtacc cacagcatcg gttattgttg 1981 atggtgcgcc agctctcaat cgtgtatcgt ggatggcaaa tggccatcat gtgactgtgg 2041 gcgatgacag tggccgcctg tatgtctatg atgtggctga gcatttggcc caaccatcgc 2101 gggatgaatg gtctagattt aatgccacac tcaacgagct caaaatgaat caaagcgacg 2161 aggtttaagc acacacacac acaaacacaa aatgtggggg actttgttaa gtcctgctac 2221 tacaattcta tttacagctt taaaaagact atacctaaag ttgtttaaat ggcaatttta 2281 cttttgcatt agcattatct cttcaattta tgctttcttt aactctatcc ccccaccctc 2341 caactgtctc cctctaaact acataaatga gttttctaga aatattgtct taactctcta 2401 cttctatcca ttagtcatgc cctatataaa aaaaatcgcg gttttcattt ttctttcatt 2461 ttttaaggtt tgtggctggg tttacttttc tccaaggatc attgatttgg tgttgatgat 2521 tttgtgagga aaagcctacc cagtttcact ccttagtagt tgtatatttt aatttttctc 2581 tttgtattaa acatccccct tggtttttaa gtattacaaa ataagttcat ttgaaatgaa 2641 aaaagattta actaactgtg tattaaataa actatgtatg ataaatttgt taaacaattt 2701 tattttattt atgtttttat atatgtgaat tttatttaac acaagaaaag aaagaaaaag 2761 caacaacaaa aaatctccga tattatcttt ttacagacac ttgttttcat ttactctatt 2821 ctaaattaat ttttttatgg tacatatata catatataaa taaatatatt taattataca 2881 aggctgtaac cacctgtggt tgtggccaac aaatttatat taaccccgcc ctcactcccc 2941 atggaacaaa caatgaaaca aatatgaact ttatggcagt tttctctaag aaatcatagt 3001 ggaagagttt ttttcgtttt tggttaagaa attgcattaa gtacgattgt caagacccta 3061 aactaatgat taataataat tgtatggagt tatggacagt taataaggcg tacgtcgagt 3121 acacagtaag atagtcgtct acatacgaaa aagaaaacac tacacaaaat atttattgaa 3181 actaatctaa taaatatacc agcatatgga aattattgga aattattaa