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LOCUS XM_013256425 3235 bp mRNA linear INV 02-SEP-2023 chain (LOC106090288), transcript variant X4, mRNA. ACCESSION XM_013256425 VERSION XM_013256425.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013256425.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3235 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3235 /gene="LOC106090288" /note="cytoplasmic dynein 1 intermediate chain; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins" /db_xref="GeneID:106090288" CDS 204..2174 /gene="LOC106090288" /codon_start=1 /product="cytoplasmic dynein 1 intermediate chain isoform X3" /protein_id="XP_013111879.2" /db_xref="GeneID:106090288" /translation="MDRKAELERKKARLAALREEKDRRRREKEMKDMEELAVRSSEKD QRKDLDEMLSSLGVAPVSEVLTSLSSVNSLNSDNSNTQTPDVSLQTNMNGTSAGKKPL NLSVYSVQATNIPPKETLTYSKQTQTQSTGGHERDVLSCHSSPLSGYMEDWWRPRKAH ATDYYDEYNLNPGLEWEDEFTDDEESSLPHMDGFTSKLPPGYLTHGLPTVKDVAPAIT PMEQKKEQEEKKEIKELSEEQKQMIILSEDFQKFVLRAGRFMERALSENVDIYLDYIG GGDNEEANDEKSHARLSLNRVFYDDRWSKNRCITCMDWSTHFPELVAASYHNNEESPN EPDGVVMVWNTKFKKQTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQVVLWDNRVQ KRTPIQRTPLSAAAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTLE LQQSQKKPIAITCMAFPANEINSLVMGSEDGYVYSASRHGLRSGVNETFEKHIGPVTG ISTHYNQSSPDFGHLFLTSSIDWTIKLWSLKDTKPLYSFEDNSDYVMDVAWSPIHPAL FAAVDGSGRLDLWNLNQDTEVPTASVIVDGAPALNRVSWMANGHHVTVGDDSGRLYVY DVAEHLAQPSRDEWSRFNATLNELKMNQSDEV" polyA_site 3235 /gene="LOC106090288" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tattgaaata atcaatactt cacaactcta ggaaactcgc aaaagtattg tgcacggaaa 61 aatatgtggt tttaagtact taatcgaagc ataaatatat aaatttcata tcgaaaagct 121 gcaaagagaa caccgccaag tttgagatta tctaaagatc ataaacccct ctaaacacca 181 aaagtcacaa aaatcctaaa gacatggatc gcaaagctga attggagcgc aagaaagcca 241 ggttagcggc tttgcgcgaa gaaaaagaca gacgtcggcg tgaaaaagaa atgaaagata 301 tggaggaact tgctgtaaga agctcagaaa aggatcaaag aaaggatttg gatgaaatgc 361 tttcttcatt gggtgtggca ccagtttctg aagttcttac ttcattgtct tcggtaaatt 421 cattgaattc ggacaactct aatactcaga caccagatgt cagtctgcaa acgaatatga 481 atggcactag tgctggcaag aaacccttaa acttgagtgt ctatagtgtt caggccacta 541 acattccacc aaaagaaaca ctcacctatt ctaaacagac ccaaacacaa agtaccggtg 601 gccatgagcg tgatgttctt tcttgccact cctcacctct gtcaggatat atggaggatt 661 ggtggagacc acgcaaagct catgctacgg actattatga tgaatacaat cttaatccgg 721 gtttagaatg ggaggatgag ttcacagatg acgaagagag ttcgctgcca cacatggatg 781 gattcacctc gaagttaccg cctggctatt tgacacatgg tctgcccaca gtgaaagatg 841 ttgcaccggc cataacgccc atggaacaaa agaaggagca agaggagaag aaagagatca 901 aggaactgtc ggaggaacaa aaacaaatga tcatcttatc tgaggacttc caaaagtttg 961 ttttgcgtgc tggccgtttt atggagcggg ctctctcaga gaatgtcgac atctatttgg 1021 attacattgg cggtggtgac aatgaggagg ctaatgatga gaaatctcat gcacgtttat 1081 cattgaatcg cgttttctat gatgatcgct ggtcgaaaaa tcgttgcata acatgcatgg 1141 attggtctac gcattttccg gaattggtgg cagcttccta tcataacaat gaagaaagtc 1201 ctaacgaacc cgacggtgtt gttatggtct ggaataccaa atttaagaaa caaacccccg 1261 aagatgtttt ccattgtcaa agtgctgtta tgtccacatg ttttgctaaa ttcaatccca 1321 atctcatttt gggtggcacc tattccggtc aagtagttct gtgggataat cgtgtacaga 1381 aacgtacacc cattcaacgt acccctctga gtgctgctgc tcacacacat ccagtgtatt 1441 gtttgcaaat ggtgggaaca caaaatgctc acaatgtcat ctcaatatca tccgatggca 1501 aattgtgttc gtggagtttg gatatgttgt cacaacctca ggatacgtta gaattgcaac 1561 agagccagaa gaaacctatt gccattacgt gtatggcatt tccggctaat gagattaaca 1621 gtttggtgat gggcagtgaa gatggttatg tttactcagc ttctcgccat ggcttgagat 1681 ctggtgtaaa tgagacattt gagaagcata tcggtcctgt cactggcatt tctactcact 1741 acaatcaatc atcacctgat tttggccatt tgttccttac ctcatccatc gattggacaa 1801 tcaaattgtg gtcgctgaag gacaccaaac cgctgtactc attcgaggac aattccgatt 1861 atgttatgga tgtggcctgg tctcccattc atcctgctct gtttgctgct gtcgatggta 1921 gcggccgcct tgatttatgg aatctaaatc aagacaccga agtacccaca gcatcggtta 1981 ttgttgatgg tgcgccagct ctcaatcgtg tatcgtggat ggcaaatggc catcatgtga 2041 ctgtgggcga tgacagtggc cgcctgtatg tctatgatgt ggctgagcat ttggcccaac 2101 catcgcggga tgaatggtct agatttaatg ccacactcaa cgagctcaaa atgaatcaaa 2161 gcgacgaggt ttaagcacac acacacacaa acacaaaatg tgggggactt tgttaagtcc 2221 tgctactaca attctattta cagctttaaa aagactatac ctaaagttgt ttaaatggca 2281 attttacttt tgcattagca ttatctcttc aatttatgct ttctttaact ctatcccccc 2341 accctccaac tgtctccctc taaactacat aaatgagttt tctagaaata ttgtcttaac 2401 tctctacttc tatccattag tcatgcccta tataaaaaaa atcgcggttt tcatttttct 2461 ttcatttttt aaggtttgtg gctgggttta cttttctcca aggatcattg atttggtgtt 2521 gatgattttg tgaggaaaag cctacccagt ttcactcctt agtagttgta tattttaatt 2581 tttctctttg tattaaacat cccccttggt ttttaagtat tacaaaataa gttcatttga 2641 aatgaaaaaa gatttaacta actgtgtatt aaataaacta tgtatgataa atttgttaaa 2701 caattttatt ttatttatgt ttttatatat gtgaatttta tttaacacaa gaaaagaaag 2761 aaaaagcaac aacaaaaaat ctccgatatt atctttttac agacacttgt tttcatttac 2821 tctattctaa attaattttt ttatggtaca tatatacata tataaataaa tatatttaat 2881 tatacaaggc tgtaaccacc tgtggttgtg gccaacaaat ttatattaac cccgccctca 2941 ctccccatgg aacaaacaat gaaacaaata tgaactttat ggcagttttc tctaagaaat 3001 catagtggaa gagttttttt cgtttttggt taagaaattg cattaagtac gattgtcaag 3061 accctaaact aatgattaat aataattgta tggagttatg gacagttaat aaggcgtacg 3121 tcgagtacac agtaagatag tcgtctacat acgaaaaaga aaacactaca caaaatattt 3181 attgaaacta atctaataaa tataccagca tatggaaatt attggaaatt attaa