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LOCUS XM_013256424 3238 bp mRNA linear INV 02-SEP-2023 chain (LOC106090288), transcript variant X3, mRNA. ACCESSION XM_013256424 VERSION XM_013256424.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013256424.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3238 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3238 /gene="LOC106090288" /note="cytoplasmic dynein 1 intermediate chain; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins" /db_xref="GeneID:106090288" CDS 204..2177 /gene="LOC106090288" /codon_start=1 /product="cytoplasmic dynein 1 intermediate chain isoform X2" /protein_id="XP_013111878.2" /db_xref="GeneID:106090288" /translation="MDRKAELERKKARLAALREEKDRRRREKEMKDMEELAVRSSEKD QRKDLDEMLSSLGVAPVSEVLTSLSSVNSLNSDNSNTQTPDVSLQTNMNGTSAGKKPL NLSVYSVQATNIPPKETLTYSKQTQTQSTGGHERDVLSCHSSPLSGYMEDWWRPRKAH ATDYYDEYNLNPGLEWEDEFTGDDEESSLPHMDGFTSKLPPGYLTHGLPTVKDVAPAI TPMEQKKEQEEKKEIKELSEEQKQMIILSEDFQKFVLRAGRFMERALSENVDIYLDYI GGGDNEEANDEKSHARLSLNRVFYDDRWSKNRCITCMDWSTHFPELVAASYHNNEESP NEPDGVVMVWNTKFKKQTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQVVLWDNRV QKRTPIQRTPLSAAAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTL ELQQSQKKPIAITCMAFPANEINSLVMGSEDGYVYSASRHGLRSGVNETFEKHIGPVT GISTHYNQSSPDFGHLFLTSSIDWTIKLWSLKDTKPLYSFEDNSDYVMDVAWSPIHPA LFAAVDGSGRLDLWNLNQDTEVPTASVIVDGAPALNRVSWMANGHHVTVGDDSGRLYV YDVAEHLAQPSRDEWSRFNATLNELKMNQSDEV" polyA_site 3238 /gene="LOC106090288" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tattgaaata atcaatactt cacaactcta ggaaactcgc aaaagtattg tgcacggaaa 61 aatatgtggt tttaagtact taatcgaagc ataaatatat aaatttcata tcgaaaagct 121 gcaaagagaa caccgccaag tttgagatta tctaaagatc ataaacccct ctaaacacca 181 aaagtcacaa aaatcctaaa gacatggatc gcaaagctga attggagcgc aagaaagcca 241 ggttagcggc tttgcgcgaa gaaaaagaca gacgtcggcg tgaaaaagaa atgaaagata 301 tggaggaact tgctgtaaga agctcagaaa aggatcaaag aaaggatttg gatgaaatgc 361 tttcttcatt gggtgtggca ccagtttctg aagttcttac ttcattgtct tcggtaaatt 421 cattgaattc ggacaactct aatactcaga caccagatgt cagtctgcaa acgaatatga 481 atggcactag tgctggcaag aaacccttaa acttgagtgt ctatagtgtt caggccacta 541 acattccacc aaaagaaaca ctcacctatt ctaaacagac ccaaacacaa agtaccggtg 601 gccatgagcg tgatgttctt tcttgccact cctcacctct gtcaggatat atggaggatt 661 ggtggagacc acgcaaagct catgctacgg actattatga tgaatacaat cttaatccgg 721 gtttagaatg ggaggatgag ttcacaggag atgacgaaga gagttcgctg ccacacatgg 781 atggattcac ctcgaagtta ccgcctggct atttgacaca tggtctgccc acagtgaaag 841 atgttgcacc ggccataacg cccatggaac aaaagaagga gcaagaggag aagaaagaga 901 tcaaggaact gtcggaggaa caaaaacaaa tgatcatctt atctgaggac ttccaaaagt 961 ttgttttgcg tgctggccgt tttatggagc gggctctctc agagaatgtc gacatctatt 1021 tggattacat tggcggtggt gacaatgagg aggctaatga tgagaaatct catgcacgtt 1081 tatcattgaa tcgcgttttc tatgatgatc gctggtcgaa aaatcgttgc ataacatgca 1141 tggattggtc tacgcatttt ccggaattgg tggcagcttc ctatcataac aatgaagaaa 1201 gtcctaacga acccgacggt gttgttatgg tctggaatac caaatttaag aaacaaaccc 1261 ccgaagatgt tttccattgt caaagtgctg ttatgtccac atgttttgct aaattcaatc 1321 ccaatctcat tttgggtggc acctattccg gtcaagtagt tctgtgggat aatcgtgtac 1381 agaaacgtac acccattcaa cgtacccctc tgagtgctgc tgctcacaca catccagtgt 1441 attgtttgca aatggtggga acacaaaatg ctcacaatgt catctcaata tcatccgatg 1501 gcaaattgtg ttcgtggagt ttggatatgt tgtcacaacc tcaggatacg ttagaattgc 1561 aacagagcca gaagaaacct attgccatta cgtgtatggc atttccggct aatgagatta 1621 acagtttggt gatgggcagt gaagatggtt atgtttactc agcttctcgc catggcttga 1681 gatctggtgt aaatgagaca tttgagaagc atatcggtcc tgtcactggc atttctactc 1741 actacaatca atcatcacct gattttggcc atttgttcct tacctcatcc atcgattgga 1801 caatcaaatt gtggtcgctg aaggacacca aaccgctgta ctcattcgag gacaattccg 1861 attatgttat ggatgtggcc tggtctccca ttcatcctgc tctgtttgct gctgtcgatg 1921 gtagcggccg ccttgattta tggaatctaa atcaagacac cgaagtaccc acagcatcgg 1981 ttattgttga tggtgcgcca gctctcaatc gtgtatcgtg gatggcaaat ggccatcatg 2041 tgactgtggg cgatgacagt ggccgcctgt atgtctatga tgtggctgag catttggccc 2101 aaccatcgcg ggatgaatgg tctagattta atgccacact caacgagctc aaaatgaatc 2161 aaagcgacga ggtttaagca cacacacaca caaacacaaa atgtggggga ctttgttaag 2221 tcctgctact acaattctat ttacagcttt aaaaagacta tacctaaagt tgtttaaatg 2281 gcaattttac ttttgcatta gcattatctc ttcaatttat gctttcttta actctatccc 2341 cccaccctcc aactgtctcc ctctaaacta cataaatgag ttttctagaa atattgtctt 2401 aactctctac ttctatccat tagtcatgcc ctatataaaa aaaatcgcgg ttttcatttt 2461 tctttcattt tttaaggttt gtggctgggt ttacttttct ccaaggatca ttgatttggt 2521 gttgatgatt ttgtgaggaa aagcctaccc agtttcactc cttagtagtt gtatatttta 2581 atttttctct ttgtattaaa catccccctt ggtttttaag tattacaaaa taagttcatt 2641 tgaaatgaaa aaagatttaa ctaactgtgt attaaataaa ctatgtatga taaatttgtt 2701 aaacaatttt attttattta tgtttttata tatgtgaatt ttatttaaca caagaaaaga 2761 aagaaaaagc aacaacaaaa aatctccgat attatctttt tacagacact tgttttcatt 2821 tactctattc taaattaatt tttttatggt acatatatac atatataaat aaatatattt 2881 aattatacaa ggctgtaacc acctgtggtt gtggccaaca aatttatatt aaccccgccc 2941 tcactcccca tggaacaaac aatgaaacaa atatgaactt tatggcagtt ttctctaaga 3001 aatcatagtg gaagagtttt tttcgttttt ggttaagaaa ttgcattaag tacgattgtc 3061 aagaccctaa actaatgatt aataataatt gtatggagtt atggacagtt aataaggcgt 3121 acgtcgagta cacagtaaga tagtcgtcta catacgaaaa agaaaacact acacaaaata 3181 tttattgaaa ctaatctaat aaatatacca gcatatggaa attattggaa attattaa