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LOCUS XM_013256423 3218 bp mRNA linear INV 02-SEP-2023 chain (LOC106090288), transcript variant X2, mRNA. ACCESSION XM_013256423 VERSION XM_013256423.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013256423.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3218 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3218 /gene="LOC106090288" /note="cytoplasmic dynein 1 intermediate chain; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins" /db_xref="GeneID:106090288" CDS 163..2157 /gene="LOC106090288" /codon_start=1 /product="cytoplasmic dynein 1 intermediate chain isoform X1" /protein_id="XP_013111877.2" /db_xref="GeneID:106090288" /translation="MDRKAELERKKARLAALREEKDRRRREKEMKDMEELAVRSSEKD QRKDLDEMLSSLGVAPVSEVLTSLSSVNSLNSDNSNTQTPDVSLQTNMNGTSAGKKPL NLSVYSVQATNIPPKETLTYSKQTQTQSTGGHERDVLSCHSSPLSGYMEDWWRPRKAH ATDYYDEYNLNPGLEWEDEFTVLAFDAQGDDEESSLPHMDGFTSKLPPGYLTHGLPTV KDVAPAITPMEQKKEQEEKKEIKELSEEQKQMIILSEDFQKFVLRAGRFMERALSENV DIYLDYIGGGDNEEANDEKSHARLSLNRVFYDDRWSKNRCITCMDWSTHFPELVAASY HNNEESPNEPDGVVMVWNTKFKKQTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQV VLWDNRVQKRTPIQRTPLSAAAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWSLDML SQPQDTLELQQSQKKPIAITCMAFPANEINSLVMGSEDGYVYSASRHGLRSGVNETFE KHIGPVTGISTHYNQSSPDFGHLFLTSSIDWTIKLWSLKDTKPLYSFEDNSDYVMDVA WSPIHPALFAAVDGSGRLDLWNLNQDTEVPTASVIVDGAPALNRVSWMANGHHVTVGD DSGRLYVYDVAEHLAQPSRDEWSRFNATLNELKMNQSDEV" polyA_site 3218 /gene="LOC106090288" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tttcttgtgt gtcagtcagt ataggcgaat gcaacgcaac gactacagac aggccagata 61 ttgattttgg ttaacatttt gtgaaaaaac accgccaagt ttgagattat ctaaagatca 121 taaacccctc taaacaccaa aagtcacaaa aatcctaaag acatggatcg caaagctgaa 181 ttggagcgca agaaagccag gttagcggct ttgcgcgaag aaaaagacag acgtcggcgt 241 gaaaaagaaa tgaaagatat ggaggaactt gctgtaagaa gctcagaaaa ggatcaaaga 301 aaggatttgg atgaaatgct ttcttcattg ggtgtggcac cagtttctga agttcttact 361 tcattgtctt cggtaaattc attgaattcg gacaactcta atactcagac accagatgtc 421 agtctgcaaa cgaatatgaa tggcactagt gctggcaaga aacccttaaa cttgagtgtc 481 tatagtgttc aggccactaa cattccacca aaagaaacac tcacctattc taaacagacc 541 caaacacaaa gtaccggtgg ccatgagcgt gatgttcttt cttgccactc ctcacctctg 601 tcaggatata tggaggattg gtggagacca cgcaaagctc atgctacgga ctattatgat 661 gaatacaatc ttaatccggg tttagaatgg gaggatgagt tcacagtgct tgcatttgat 721 gcccaaggag atgacgaaga gagttcgctg ccacacatgg atggattcac ctcgaagtta 781 ccgcctggct atttgacaca tggtctgccc acagtgaaag atgttgcacc ggccataacg 841 cccatggaac aaaagaagga gcaagaggag aagaaagaga tcaaggaact gtcggaggaa 901 caaaaacaaa tgatcatctt atctgaggac ttccaaaagt ttgttttgcg tgctggccgt 961 tttatggagc gggctctctc agagaatgtc gacatctatt tggattacat tggcggtggt 1021 gacaatgagg aggctaatga tgagaaatct catgcacgtt tatcattgaa tcgcgttttc 1081 tatgatgatc gctggtcgaa aaatcgttgc ataacatgca tggattggtc tacgcatttt 1141 ccggaattgg tggcagcttc ctatcataac aatgaagaaa gtcctaacga acccgacggt 1201 gttgttatgg tctggaatac caaatttaag aaacaaaccc ccgaagatgt tttccattgt 1261 caaagtgctg ttatgtccac atgttttgct aaattcaatc ccaatctcat tttgggtggc 1321 acctattccg gtcaagtagt tctgtgggat aatcgtgtac agaaacgtac acccattcaa 1381 cgtacccctc tgagtgctgc tgctcacaca catccagtgt attgtttgca aatggtggga 1441 acacaaaatg ctcacaatgt catctcaata tcatccgatg gcaaattgtg ttcgtggagt 1501 ttggatatgt tgtcacaacc tcaggatacg ttagaattgc aacagagcca gaagaaacct 1561 attgccatta cgtgtatggc atttccggct aatgagatta acagtttggt gatgggcagt 1621 gaagatggtt atgtttactc agcttctcgc catggcttga gatctggtgt aaatgagaca 1681 tttgagaagc atatcggtcc tgtcactggc atttctactc actacaatca atcatcacct 1741 gattttggcc atttgttcct tacctcatcc atcgattgga caatcaaatt gtggtcgctg 1801 aaggacacca aaccgctgta ctcattcgag gacaattccg attatgttat ggatgtggcc 1861 tggtctccca ttcatcctgc tctgtttgct gctgtcgatg gtagcggccg ccttgattta 1921 tggaatctaa atcaagacac cgaagtaccc acagcatcgg ttattgttga tggtgcgcca 1981 gctctcaatc gtgtatcgtg gatggcaaat ggccatcatg tgactgtggg cgatgacagt 2041 ggccgcctgt atgtctatga tgtggctgag catttggccc aaccatcgcg ggatgaatgg 2101 tctagattta atgccacact caacgagctc aaaatgaatc aaagcgacga ggtttaagca 2161 cacacacaca caaacacaaa atgtggggga ctttgttaag tcctgctact acaattctat 2221 ttacagcttt aaaaagacta tacctaaagt tgtttaaatg gcaattttac ttttgcatta 2281 gcattatctc ttcaatttat gctttcttta actctatccc cccaccctcc aactgtctcc 2341 ctctaaacta cataaatgag ttttctagaa atattgtctt aactctctac ttctatccat 2401 tagtcatgcc ctatataaaa aaaatcgcgg ttttcatttt tctttcattt tttaaggttt 2461 gtggctgggt ttacttttct ccaaggatca ttgatttggt gttgatgatt ttgtgaggaa 2521 aagcctaccc agtttcactc cttagtagtt gtatatttta atttttctct ttgtattaaa 2581 catccccctt ggtttttaag tattacaaaa taagttcatt tgaaatgaaa aaagatttaa 2641 ctaactgtgt attaaataaa ctatgtatga taaatttgtt aaacaatttt attttattta 2701 tgtttttata tatgtgaatt ttatttaaca caagaaaaga aagaaaaagc aacaacaaaa 2761 aatctccgat attatctttt tacagacact tgttttcatt tactctattc taaattaatt 2821 tttttatggt acatatatac atatataaat aaatatattt aattatacaa ggctgtaacc 2881 acctgtggtt gtggccaaca aatttatatt aaccccgccc tcactcccca tggaacaaac 2941 aatgaaacaa atatgaactt tatggcagtt ttctctaaga aatcatagtg gaagagtttt 3001 tttcgttttt ggttaagaaa ttgcattaag tacgattgtc aagaccctaa actaatgatt 3061 aataataatt gtatggagtt atggacagtt aataaggcgt acgtcgagta cacagtaaga 3121 tagtcgtcta catacgaaaa agaaaacact acacaaaata tttattgaaa ctaatctaat 3181 aaatatacca gcatatggaa attattggaa attattaa