Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_013256422 3259 bp mRNA linear INV 02-SEP-2023 chain (LOC106090288), transcript variant X1, mRNA. ACCESSION XM_013256422 VERSION XM_013256422.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013256422.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3259 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3259 /gene="LOC106090288" /note="cytoplasmic dynein 1 intermediate chain; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins" /db_xref="GeneID:106090288" CDS 204..2198 /gene="LOC106090288" /codon_start=1 /product="cytoplasmic dynein 1 intermediate chain isoform X1" /protein_id="XP_013111876.2" /db_xref="GeneID:106090288" /translation="MDRKAELERKKARLAALREEKDRRRREKEMKDMEELAVRSSEKD QRKDLDEMLSSLGVAPVSEVLTSLSSVNSLNSDNSNTQTPDVSLQTNMNGTSAGKKPL NLSVYSVQATNIPPKETLTYSKQTQTQSTGGHERDVLSCHSSPLSGYMEDWWRPRKAH ATDYYDEYNLNPGLEWEDEFTVLAFDAQGDDEESSLPHMDGFTSKLPPGYLTHGLPTV KDVAPAITPMEQKKEQEEKKEIKELSEEQKQMIILSEDFQKFVLRAGRFMERALSENV DIYLDYIGGGDNEEANDEKSHARLSLNRVFYDDRWSKNRCITCMDWSTHFPELVAASY HNNEESPNEPDGVVMVWNTKFKKQTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQV VLWDNRVQKRTPIQRTPLSAAAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWSLDML SQPQDTLELQQSQKKPIAITCMAFPANEINSLVMGSEDGYVYSASRHGLRSGVNETFE KHIGPVTGISTHYNQSSPDFGHLFLTSSIDWTIKLWSLKDTKPLYSFEDNSDYVMDVA WSPIHPALFAAVDGSGRLDLWNLNQDTEVPTASVIVDGAPALNRVSWMANGHHVTVGD DSGRLYVYDVAEHLAQPSRDEWSRFNATLNELKMNQSDEV" polyA_site 3259 /gene="LOC106090288" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tattgaaata atcaatactt cacaactcta ggaaactcgc aaaagtattg tgcacggaaa 61 aatatgtggt tttaagtact taatcgaagc ataaatatat aaatttcata tcgaaaagct 121 gcaaagagaa caccgccaag tttgagatta tctaaagatc ataaacccct ctaaacacca 181 aaagtcacaa aaatcctaaa gacatggatc gcaaagctga attggagcgc aagaaagcca 241 ggttagcggc tttgcgcgaa gaaaaagaca gacgtcggcg tgaaaaagaa atgaaagata 301 tggaggaact tgctgtaaga agctcagaaa aggatcaaag aaaggatttg gatgaaatgc 361 tttcttcatt gggtgtggca ccagtttctg aagttcttac ttcattgtct tcggtaaatt 421 cattgaattc ggacaactct aatactcaga caccagatgt cagtctgcaa acgaatatga 481 atggcactag tgctggcaag aaacccttaa acttgagtgt ctatagtgtt caggccacta 541 acattccacc aaaagaaaca ctcacctatt ctaaacagac ccaaacacaa agtaccggtg 601 gccatgagcg tgatgttctt tcttgccact cctcacctct gtcaggatat atggaggatt 661 ggtggagacc acgcaaagct catgctacgg actattatga tgaatacaat cttaatccgg 721 gtttagaatg ggaggatgag ttcacagtgc ttgcatttga tgcccaagga gatgacgaag 781 agagttcgct gccacacatg gatggattca cctcgaagtt accgcctggc tatttgacac 841 atggtctgcc cacagtgaaa gatgttgcac cggccataac gcccatggaa caaaagaagg 901 agcaagagga gaagaaagag atcaaggaac tgtcggagga acaaaaacaa atgatcatct 961 tatctgagga cttccaaaag tttgttttgc gtgctggccg ttttatggag cgggctctct 1021 cagagaatgt cgacatctat ttggattaca ttggcggtgg tgacaatgag gaggctaatg 1081 atgagaaatc tcatgcacgt ttatcattga atcgcgtttt ctatgatgat cgctggtcga 1141 aaaatcgttg cataacatgc atggattggt ctacgcattt tccggaattg gtggcagctt 1201 cctatcataa caatgaagaa agtcctaacg aacccgacgg tgttgttatg gtctggaata 1261 ccaaatttaa gaaacaaacc cccgaagatg ttttccattg tcaaagtgct gttatgtcca 1321 catgttttgc taaattcaat cccaatctca ttttgggtgg cacctattcc ggtcaagtag 1381 ttctgtggga taatcgtgta cagaaacgta cacccattca acgtacccct ctgagtgctg 1441 ctgctcacac acatccagtg tattgtttgc aaatggtggg aacacaaaat gctcacaatg 1501 tcatctcaat atcatccgat ggcaaattgt gttcgtggag tttggatatg ttgtcacaac 1561 ctcaggatac gttagaattg caacagagcc agaagaaacc tattgccatt acgtgtatgg 1621 catttccggc taatgagatt aacagtttgg tgatgggcag tgaagatggt tatgtttact 1681 cagcttctcg ccatggcttg agatctggtg taaatgagac atttgagaag catatcggtc 1741 ctgtcactgg catttctact cactacaatc aatcatcacc tgattttggc catttgttcc 1801 ttacctcatc catcgattgg acaatcaaat tgtggtcgct gaaggacacc aaaccgctgt 1861 actcattcga ggacaattcc gattatgtta tggatgtggc ctggtctccc attcatcctg 1921 ctctgtttgc tgctgtcgat ggtagcggcc gccttgattt atggaatcta aatcaagaca 1981 ccgaagtacc cacagcatcg gttattgttg atggtgcgcc agctctcaat cgtgtatcgt 2041 ggatggcaaa tggccatcat gtgactgtgg gcgatgacag tggccgcctg tatgtctatg 2101 atgtggctga gcatttggcc caaccatcgc gggatgaatg gtctagattt aatgccacac 2161 tcaacgagct caaaatgaat caaagcgacg aggtttaagc acacacacac acaaacacaa 2221 aatgtggggg actttgttaa gtcctgctac tacaattcta tttacagctt taaaaagact 2281 atacctaaag ttgtttaaat ggcaatttta cttttgcatt agcattatct cttcaattta 2341 tgctttcttt aactctatcc ccccaccctc caactgtctc cctctaaact acataaatga 2401 gttttctaga aatattgtct taactctcta cttctatcca ttagtcatgc cctatataaa 2461 aaaaatcgcg gttttcattt ttctttcatt ttttaaggtt tgtggctggg tttacttttc 2521 tccaaggatc attgatttgg tgttgatgat tttgtgagga aaagcctacc cagtttcact 2581 ccttagtagt tgtatatttt aatttttctc tttgtattaa acatccccct tggtttttaa 2641 gtattacaaa ataagttcat ttgaaatgaa aaaagattta actaactgtg tattaaataa 2701 actatgtatg ataaatttgt taaacaattt tattttattt atgtttttat atatgtgaat 2761 tttatttaac acaagaaaag aaagaaaaag caacaacaaa aaatctccga tattatcttt 2821 ttacagacac ttgttttcat ttactctatt ctaaattaat ttttttatgg tacatatata 2881 catatataaa taaatatatt taattataca aggctgtaac cacctgtggt tgtggccaac 2941 aaatttatat taaccccgcc ctcactcccc atggaacaaa caatgaaaca aatatgaact 3001 ttatggcagt tttctctaag aaatcatagt ggaagagttt ttttcgtttt tggttaagaa 3061 attgcattaa gtacgattgt caagacccta aactaatgat taataataat tgtatggagt 3121 tatggacagt taataaggcg tacgtcgagt acacagtaag atagtcgtct acatacgaaa 3181 aagaaaacac tacacaaaat atttattgaa actaatctaa taaatatacc agcatatgga 3241 aattattgga aattattaa