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PREDICTED: Stomoxys calcitrans neurogenic locus Notch protein


LOCUS       XM_013256267            1682 bp    mRNA    linear   INV 02-SEP-2023
            (LOC106090165), transcript variant X2, mRNA.
ACCESSION   XM_013256267
VERSION     XM_013256267.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013256267.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1682
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1682
                     /gene="LOC106090165"
                     /note="neurogenic locus Notch protein; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:106090165"
     CDS             106..1428
                     /gene="LOC106090165"
                     /codon_start=1
                     /product="neurogenic locus notch homolog protein 1 isoform
                     X2"
                     /protein_id="XP_013111721.2"
                     /db_xref="GeneID:106090165"
                     /translation="MLSRSLWMHVLIVLAAIAWANAEDQANATAVDDKKLAKRAICST
                     CSYNGPDVHVNGCHGNPCGVNAMCQETAGGRPVCSCPPGHTGNPLTHCNRGECLDNVD
                     CRSDLQCQNGRCVNPCIGSCGTNANCEARNHVAVCSCPHGFNGDPFTSCRQNDPEEQC
                     HPSPCGVNSKCEILNGVPTCSCLPGFVGNPLSGCRHECDHDGDCSARDMCSNFKCVPA
                     CNQCGTGASCNTVTAHRAVCECPKGYIGSPYTECRPECYGDSDCPASRPACFYGICKN
                     TCDGACGIGADCKLRGLTPVCSCPRDMTGDPFVMCRPFTPADLCEPNPCGTNAICIPG
                     HDNTGRERPVCNCLPGHTGNPLSHCSRGECLSNNECPDNKACINYRCVNPCIGKCGSG
                     AICEPKSHLAVCKCPHGFSGDALVSCRQTTVHPVARYINNDGCHTCGK"
     polyA_site      1682
                     /gene="LOC106090165"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aattgagaac tgatcagtgt tcgaaaaaac tcacaaacga aatacgagat tgttgtcgcc
       61 gtttattttt taattttttg ttgtttgtag aacattaatt ttgaaatgtt atcacgatcg
      121 ttatggatgc atgtactcat agtacttgcg gccattgctt gggcaaatgc cgaagatcaa
      181 gcaaatgcaa ccgctgtaga tgataaaaaa ttagcaaaac gtgctatttg tagcacttgc
      241 tcatacaatg gacccgatgt ccatgtgaat ggctgccacg gtaatccctg tggtgtgaat
      301 gccatgtgcc aggaaacagc aggcggccgt cctgtttgct cctgtccccc tggacatact
      361 ggtaacccgt tgacccactg caatcgtggt gaatgcctgg acaatgtaga ctgccgcagt
      421 gacctgcaat gccaaaatgg ccgttgtgtt aatccttgca ttggatcatg tggcacaaat
      481 gccaattgtg aggccagaaa tcatgtagcc gtctgtagct gtccccatgg ctttaatggc
      541 gatccattca cttcttgtcg ccaaaatgac ccagaggaac aatgtcatcc cagcccttgt
      601 ggtgtaaatt ccaaatgcga aattctcaac ggtgtaccca cttgctcatg cttgcctggt
      661 tttgttggta atcccttgag cggatgtcgt catgaatgtg atcatgatgg cgattgcagt
      721 gcccgtgata tgtgcagtaa tttcaaatgt gttcccgcct gtaatcaatg cggcactggt
      781 gccagttgca atactgttac cgctcatcgt gcggtgtgcg agtgtcccaa aggctacata
      841 ggcagcccct atactgaatg tcgccctgag tgttatggtg actctgattg tcctgccagt
      901 aggcctgcat gtttctatgg aatttgtaaa aacacttgtg atggtgcttg tggtattggg
      961 gcagattgta aattgagagg tttgacgcct gtgtgcagtt gcccccgtga catgactggt
     1021 gatccttttg ttatgtgtcg cccatttaca ccggctgatc tgtgtgaacc caatccgtgt
     1081 ggcacaaatg ccatttgcat acccggccat gataataccg gacgtgagcg ccctgtttgc
     1141 aattgtctgc ctggccacac tggcaatcct ctcagccact gttccagagg tgaatgtctt
     1201 agcaataacg aatgccccga caacaaagct tgcattaact atagatgtgt taatccctgt
     1261 attggtaaat gcggctccgg tgccatatgt gaacctaaat cccatttggc tgtatgcaaa
     1321 tgtccccatg gcttttctgg agatgctttg gtgtcttgcc gccaaactac agtacatcca
     1381 gtggcacgtt acattaataa cgatggctgc catacttgcg gcaaatagac taatcacttt
     1441 taagatatga actgtcacac tcaaagccaa ttattcagtc attatgcata taatataaag
     1501 ctccaataat tttaaccaaa cctttcctaa ttactactta tacaagtaca attatatttg
     1561 ttgtttttca tttatattta atttttttaa ttaaacattt ttaagttttt ttatattaat
     1621 ttattgcttc ttttagttac ttctgcatat atgtaaatat aataaattaa ttgaatagac
     1681 ga