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PREDICTED: Stomoxys calcitrans neurogenic locus Notch protein


LOCUS       XM_013256266            1763 bp    mRNA    linear   INV 02-SEP-2023
            (LOC106090165), transcript variant X1, mRNA.
ACCESSION   XM_013256266
VERSION     XM_013256266.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013256266.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1763
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1763
                     /gene="LOC106090165"
                     /note="neurogenic locus Notch protein; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:106090165"
     CDS             106..1509
                     /gene="LOC106090165"
                     /codon_start=1
                     /product="neurogenic locus Notch protein isoform X1"
                     /protein_id="XP_013111720.2"
                     /db_xref="GeneID:106090165"
                     /translation="MLSRSLWMHVLIVLAAIAWANAEDQANATAVDDKKLAKRAICST
                     CSYNGRTYYTYGDGRTVERQYYQDPYYTQYSRADVHVNGCHGNPCGVNAMCQETAGGR
                     PVCSCPPGHTGNPLTHCNRGECLDNVDCRSDLQCQNGRCVNPCIGSCGTNANCEARNH
                     VAVCSCPHGFNGDPFTSCRQNDPEEQCHPSPCGVNSKCEILNGVPTCSCLPGFVGNPL
                     SGCRHECDHDGDCSARDMCSNFKCVPACNQCGTGASCNTVTAHRAVCECPKGYIGSPY
                     TECRPECYGDSDCPASRPACFYGICKNTCDGACGIGADCKLRGLTPVCSCPRDMTGDP
                     FVMCRPFTPADLCEPNPCGTNAICIPGHDNTGRERPVCNCLPGHTGNPLSHCSRGECL
                     SNNECPDNKACINYRCVNPCIGKCGSGAICEPKSHLAVCKCPHGFSGDALVSCRQTTV
                     HPVARYINNDGCHTCGK"
     polyA_site      1763
                     /gene="LOC106090165"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aattgagaac tgatcagtgt tcgaaaaaac tcacaaacga aatacgagat tgttgtcgcc
       61 gtttattttt taattttttg ttgtttgtag aacattaatt ttgaaatgtt atcacgatcg
      121 ttatggatgc atgtactcat agtacttgcg gccattgctt gggcaaatgc cgaagatcaa
      181 gcaaatgcaa ccgctgtaga tgataaaaaa ttagcaaaac gtgctatttg tagcacttgc
      241 tcatacaatg gacgtacgta ttacacatac ggggatggca gaacagtgga aagacaatac
      301 tatcaggatc cctattacac acaatattca cgtgccgatg tccatgtgaa tggctgccac
      361 ggtaatccct gtggtgtgaa tgccatgtgc caggaaacag caggcggccg tcctgtttgc
      421 tcctgtcccc ctggacatac tggtaacccg ttgacccact gcaatcgtgg tgaatgcctg
      481 gacaatgtag actgccgcag tgacctgcaa tgccaaaatg gccgttgtgt taatccttgc
      541 attggatcat gtggcacaaa tgccaattgt gaggccagaa atcatgtagc cgtctgtagc
      601 tgtccccatg gctttaatgg cgatccattc acttcttgtc gccaaaatga cccagaggaa
      661 caatgtcatc ccagcccttg tggtgtaaat tccaaatgcg aaattctcaa cggtgtaccc
      721 acttgctcat gcttgcctgg ttttgttggt aatcccttga gcggatgtcg tcatgaatgt
      781 gatcatgatg gcgattgcag tgcccgtgat atgtgcagta atttcaaatg tgttcccgcc
      841 tgtaatcaat gcggcactgg tgccagttgc aatactgtta ccgctcatcg tgcggtgtgc
      901 gagtgtccca aaggctacat aggcagcccc tatactgaat gtcgccctga gtgttatggt
      961 gactctgatt gtcctgccag taggcctgca tgtttctatg gaatttgtaa aaacacttgt
     1021 gatggtgctt gtggtattgg ggcagattgt aaattgagag gtttgacgcc tgtgtgcagt
     1081 tgcccccgtg acatgactgg tgatcctttt gttatgtgtc gcccatttac accggctgat
     1141 ctgtgtgaac ccaatccgtg tggcacaaat gccatttgca tacccggcca tgataatacc
     1201 ggacgtgagc gccctgtttg caattgtctg cctggccaca ctggcaatcc tctcagccac
     1261 tgttccagag gtgaatgtct tagcaataac gaatgccccg acaacaaagc ttgcattaac
     1321 tatagatgtg ttaatccctg tattggtaaa tgcggctccg gtgccatatg tgaacctaaa
     1381 tcccatttgg ctgtatgcaa atgtccccat ggcttttctg gagatgcttt ggtgtcttgc
     1441 cgccaaacta cagtacatcc agtggcacgt tacattaata acgatggctg ccatacttgc
     1501 ggcaaataga ctaatcactt ttaagatatg aactgtcaca ctcaaagcca attattcagt
     1561 cattatgcat ataatataaa gctccaataa ttttaaccaa acctttccta attactactt
     1621 atacaagtac aattatattt gttgtttttc atttatattt aattttttta attaaacatt
     1681 tttaagtttt tttatattaa tttattgctt cttttagtta cttctgcata tatgtaaata
     1741 taataaatta attgaataga cga