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PREDICTED: Stomoxys calcitrans lipoamide acyltransferase component


LOCUS       XM_013256141            1897 bp    mRNA    linear   INV 02-SEP-2023
            of branched-chain alpha-keto acid dehydrogenase complex,
            mitochondrial (LOC106090070), mRNA.
ACCESSION   XM_013256141
VERSION     XM_013256141.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013256141.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1897
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1897
                     /gene="LOC106090070"
                     /note="lipoamide acyltransferase component of
                     branched-chain alpha-keto acid dehydrogenase complex,
                     mitochondrial; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 11 Proteins"
                     /db_xref="GeneID:106090070"
     CDS             186..1604
                     /gene="LOC106090070"
                     /codon_start=1
                     /product="lipoamide acyltransferase component of
                     branched-chain alpha-keto acid dehydrogenase complex,
                     mitochondrial"
                     /protein_id="XP_013111595.2"
                     /db_xref="GeneID:106090070"
                     /translation="MSAYILRNGSAAAILKKYLPRQLNNNNFAKFNAFHEQFRNLHLT
                     PCLDKVISFNLSDIGEGIREVTVKEWFVKVGDTVEQFDNLCEVQSDKASVTITSRYDG
                     KIVKLHRKVDEVALVGHALLDFEVDEDGSDSSDSEEEVAKPKDAVADKKDSAAAAKPT
                     AASDEDVGRHIALATPAVRRIAKENKVDLSKVKPTGKNGRVLKGDVMEYLGMVPPGTN
                     VPHPTIAAKSGAAVGKMVAPVPADRVEPLKGVRRAMLKSMSESLKIPHFAYSDEIDMT
                     RLVQFRDQLKDVALENGIGKLTFMPFCIKAASIALTKYPILNSSLDLENESIIYKGAH
                     NISVAIDTPQGLVVPNVKNVQQKNIIEIAKDLNSLIEKGRKGTLTPQDFVDGTFSLSN
                     IGVIGGTYTHPCIMAPQVSIGAMGRTKVVPRFNEKDEIVKAYIMSVSWSADHRVIDGV
                     TMASFSNLWKKYLENPALFLLN"
     polyA_site      1897
                     /gene="LOC106090070"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tggtgtattt caagtttagt tgcgtacgct ttcttaactt tgacggacac gttttcctct
       61 caagatatta ttcggttgga taattaggaa agaaaaacgg ttaaataaat aagagaagcc
      121 tttaaaacgc agccgcgtaa agttaataaa gttgttaaaa aatataaaaa agtaatctca
      181 ctaaaatgtc cgcctatatc ttgagaaacg gtagtgccgc agcaattcta aaaaaatact
      241 taccacgtca actgaataac aacaactttg ccaaattcaa tgcgtttcac gaacaatttc
      301 gcaacttaca cctaacccca tgcctggata aagttatttc ttttaatctc agtgatattg
      361 gtgaaggaat acgtgaagtt accgttaagg aatggttcgt caaagtcgga gatactgtgg
      421 agcaattcga taacctttgt gaggtacaat ccgataaggc atccgtaaca attaccagcc
      481 gatatgatgg taaaattgtc aaactccatc gcaaagttga tgaggtagct ttggtgggcc
      541 atgctttgct tgactttgaa gtagatgagg atggttcgga tagttcagac tcggaggaag
      601 aagtagcaaa acccaaagat gctgttgccg ataaaaagga ctctgcagca gcagcaaaac
      661 caactgccgc tagtgatgaa gatgtgggac gtcacatagc tctggccaca ccggccgtgc
      721 ggcgtattgc caaggaaaac aaagttgatt tgtctaaggt aaaaccaact ggtaagaatg
      781 gtcgtgtttt gaagggagat gtcatggaat atctgggcat ggttccacct ggcaccaatg
      841 tgcctcatcc tacaatagct gccaagagtg gtgctgctgt gggaaaaatg gttgctcccg
      901 ttccagcaga tcgcgtggag ccattgaagg gagtacgcag agctatgttg aaatcaatgt
      961 cagaatcttt gaaaattccc catttcgcct atagcgatga aatcgatatg acccgtttgg
     1021 tacaattccg cgatcaattg aaggatgtgg cccttgaaaa tggcattggt aaattgactt
     1081 ttatgccttt ctgcattaaa gccgcctcca ttgctttgac caaatatccc attttgaata
     1141 gttccttgga tttggaaaat gagtcgatta tctacaaggg agcccacaac attagtgtgg
     1201 ccattgacac tccacagggc ttggtggtgc ccaatgtcaa gaatgttcag cagaagaata
     1261 tcattgaaat agccaaagat ttgaattcgt taattgaaaa aggacgcaag ggaaccttga
     1321 caccacaaga ttttgttgat ggcacattct ctttgtcaaa cattggtgtt attggcggta
     1381 cgtacactca tccttgtata atggcaccac aggtgtccat aggagccatg ggtcgcacta
     1441 aggtggttcc tcgtttcaac gaaaaggatg aaattgtcaa agcctatatc atgagtgtca
     1501 gttggtcagc tgatcatcgt gtcatcgatg gtgttaccat ggctagtttc tccaatctat
     1561 ggaagaaata tttggaaaat cctgctttat ttttattgaa ctaaacggaa tgaattgatg
     1621 gtgaatgtac tcttagaaag gctgtattgt tgcatttatt ttttgaaaaa ataacaaagt
     1681 taaaaaagta aaaaacatat atatttttag ttagttgtcc tgctgcagga cagtttaatg
     1741 tgcatttata gacatgtaac caaacaaaat atgttaaaaa acggttacag ttgattttta
     1801 ttacaaaatt ttcctttgcc atgaaattta ctctactata tattggaata agtatataca
     1861 gattttaagt aagaaataaa aacaattatt tccgcaa