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LOCUS XM_013256109 7075 bp mRNA linear INV 02-SEP-2023 (LOC106090055), transcript variant X5, mRNA. ACCESSION XM_013256109 VERSION XM_013256109.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013256109.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7075 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..7075 /gene="LOC106090055" /note="sodium leak channel NALCN; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:106090055" CDS 149..6397 /gene="LOC106090055" /codon_start=1 /product="sodium leak channel NALCN isoform X4" /protein_id="XP_013111563.2" /db_xref="GeneID:106090055" /translation="MSEQLRTRRLGAGRIKTLSATNLAPISGGCTSGFTVTPNISHSA SSHFLQQHIHRNQTQHSTQAQFFTFHHTDSTKRVHPGPPSQSAIISGTKTAGYGFDGT SCISSPTVLNSGSGSGSGSSGLRMPNTNMGPMLGTSATVAINNSYTVHNTTNTMGAGG GAGTSGGHNNGSGVTAGQLGSASAATGGGGGAGIGGGQATTSGLSGVGGNLGGVGMGI CGGISSNAAVITGVPPIGLGLATGIGNKMLGRRQSLKGGEPFLADYGPEESLNESADI EWVNKLWVRRLMRLCALVALASVSLNTPKTFERYPPLQSITFVSDIAVTLLFTAEMIA KMHIRGVLHGEVPYLKDHWCQFDFSMVFFLWISIILQVFEILEVVPKFSSLSMMRAPR PLIMIRFLRVFLKFSMPKSRINQIFKRSSQQIYNVTLFFLFFMSLYGLMGVQFFGELK NHCVMNNSEYDEYDRPLLTLNSLAIPDTFCSMDPDSGYQCSPGMKCMKLDFLSSYVIG FNGFEDIATSIFTVYQAASQEGWVFIMYRAIDSLPAWRAAFYFSTMIFFLAWLVKNVF IAVITETFNEIRVQFQQMWGARGHIQKTAASQILSGNDQGWRLVTIDDSKHGGLAPET CHAILRSPYFRMLVMSIILANGIVTATMTFQHDGRPRHVFYERYYYIEAVFTFLLDLE TLFKIYCLGWRGYYKHSIHKFELLLAAGTTIHIVPYFYLSGFTYFQVLRVVRLIKASP MLEGFVYKIFGPGKKLGSLITFTVCLLIISSSISMQLFCFLCDFTKFETFPEAFMSMF QILTQEAWVEVMDETMIRTSKTLTPLVAIYFILYHLFVTLIVLSLFVAVILDNLELDE DIKKLKQLKFREQSAEIKETLPFRLRIFEKFPQSPQMTILHRIPNDFTLPKVRESFMK QFVIELETDDPSMESCKRPMSEYWESKMVFRKQKPVRIMNKTAKVRSAGSSLRKLAIT HIINDSNNQRLMLGDSAMLPVVGGKCGLKSQGTITHSKPWRVDQKNVRSGSIKLKQTY EHLMENGDIASAPRANSGRARPHDLDIKLLQAKRQQAEMRRNQREEDLRENHPFFDTP LFLVPRESRFRKICQKIVHGRYDARLKDPLTGKERKVQYKSLHNFLGLVTYLDWVMIF VTTLSCISMMFETPNDRVMDHPTLQIAEYTFVIFMSLELALKILADGLFFTPKAYIKD VAAVLDVFIYIVSTLFLCWMPKQIPTNSAAQLLMVLRCIRPLRIFTLVPHMRKVVYEL CRGFKEILLVSTLLILLMFIFASYGVQLYGGRLARCNDPTITKREDCVGVFMRRVFVT KMKLTLGEGESYPAMLVPRVWANPRRFNFDNIGDAMLTLFEVLSFKGWLDVRDVLIKV VGPIQAVYIHIYIFLGCMIGLTLFVGVVIANYSENKGTALLTVDQRRWCDLKKRLKIA QPLHLPPRPDGRKVRAFAYDVTQHIYFKRFIAAIVLINSALLSITWIKGESITEICIL LSVTLTFVFVVEVVMKIIAFTPRGYWQSRRNRYDLLVTVSGVVWIFLQTILRNDLSYF FGFMVVILRFFTITGKHTTLKMLMLTVGVSVCKSFFIIFGMFLLVFFYALAGTILFGT VKYGEGIGRRANFGSPVTGVAMLFRIVTGEDWNKIMHDCMVQPPYCTPGNNYWETDCG NFTASLIYFCTFYVIITYIVLNLLVAIIMENFSLFYSNEEDALLSYADIRNFQNTWNI VDIHQRGVIPVRRVKFILRLLKGRLECDPQKDRLLFKYMCYELDKLHNGEDVTFHDVI NMLSYRSVDIRKALQLEELLAREEFEYLVEEEVAKMTIRNWLEGCLKKIRAQNAYKQQ NSLIAGLRATNEPMIRPSVQEDKTPTGIGEKSAIATISGSVAAATCPPTSDAFSPTFS STENEEKDLSTSAIAPTPGAAETATVQVTQRAITATKRGYALNRSDSTGSSAGRKFLA PTSSDPQQRSTLSDKERLHITNQQKKKNSMTTSTLPVAPAPVISGPGHKKNSFFAADI SQFHYPTLNHFDHGHIPALGSPSGLMPHIIPGTKLLPFNNQANAVYEVHDWWQEQVLC TQNSDDEM" ORIGIN 1 aaaaacttta atataactgt tatacaggga gaatgcattc attttcattt tggcactaca 61 gcagtacgtg taatttgtaa acacaggaag atatttcaac aatatcttgc atccggcatc 121 gagatgataa ttacctctga tattttgaat gagtgaacaa ttgcgaactc gtcgcttagg 181 agctggtcgt attaaaacac tgtctgccac aaatcttgca cccatcagtg ggggatgtac 241 tagcggattc actgttacac ctaatatcag tcacagcgct agcagtcatt tcttgcaaca 301 gcacatacat cgcaatcaaa cgcaacattc aacacaggca caatttttta ccttccacca 361 cacggacagt accaaaagag ttcatcctgg tcccccttca cagtcggcga ttatcagcgg 421 cacaaaaact gcaggttatg gctttgatgg caccagttgc attagtagtc caactgtttt 481 aaattcaggc agtgggagtg gcagtggtag tagtggtcta cgtatgccca acaccaatat 541 ggggccaatg ctgggaacat cggccactgt tgccattaat aacagctaca ctgttcacaa 601 caccaccaat acaatgggtg ctgggggagg tgcgggtacc tcaggtggcc acaataatgg 661 ttctggtgtc actgcaggcc aactcggtag tgcttcggcg gcgaccggtg gaggaggtgg 721 tgcaggaatc ggtggtggtc aagcaacaac atctggcttg agtggcgtcg ggggaaatct 781 gggcggcgtc ggtatgggca tttgcggcgg tattagtagc aatgctgcgg ttataactgg 841 agtgccgcca ataggacttg gacttgcaac cggcattggt aacaaaatgc tcggtcgaag 901 gcaaagtctg aagggcggcg aaccatttct ggccgactat ggtccagagg aatcgctcaa 961 cgaaagtgcc gatattgaat gggtgaataa actgtgggta aggcgcctaa tgcgactttg 1021 cgctttagta gccttggcct cagtctcatt gaatactccg aaaactttcg aacgatatcc 1081 acccctgcag tcaataacat tcgtatcgga catagcggtg acgctactat ttaccgctga 1141 aatgatagcc aaaatgcaca tacgcggcgt tttacacggc gaagtaccat atttaaagga 1201 tcattggtgc caatttgatt tttctatggt attcttttta tggatttcga taatccttca 1261 agtatttgaa atacttgagg tagtgccaaa gttttcatcc ttatctatga tgagagctcc 1321 tagacccctt ataatgatcc gcttccttag agtcttcctg aaattctcaa tgccaaaaag 1381 ccgtattaat caaattttca agcgatcgag tcaacagatc tacaatgtca ccttgttttt 1441 tctcttcttt atgtccttat acggcctaat gggtgtccag ttctttggtg aattaaagaa 1501 tcattgtgtc atgaataata gtgaatacga tgaatacgac cgaccgcttt taactctgaa 1561 ttcgcttgcg attcctgaca cattctgctc catggatcca gattcgggct accaatgttc 1621 cccgggaatg aaatgtatga agttggactt tctcagcagc tacgtaatcg gatttaatgg 1681 tttcgaagat atagccacga gtatttttac cgtttatcag gctgcgtctc aagaaggatg 1741 ggtatttata atgtatcgtg ccatagactc gttgccagca tggagagccg cattttattt 1801 tagtacaatg atatttttct tggcctggct ggtgaagaat gtcttcattg ctgtcatcac 1861 tgagacattc aatgagattc gggtgcaatt tcaacaaatg tggggagctc gaggacacat 1921 ccaaaagaca gctgcttcac aaatcttaag tggaaacgat cagggctggc gtttggtaac 1981 catagatgat agtaaacatg gtggtttggc accggaaaca tgtcacgcca tattaaggtc 2041 gccatatttt cgtatgctgg taatgtcgat cattttggcc aatggtattg tcactgcgac 2101 tatgaccttt caacatgatg gtcgtccacg acatgtattt tacgaacgtt attattacat 2161 agaagccgtg tttacgtttt tgctggatct ggaaacgtta tttaaaatct attgcttggg 2221 ttggcgagga tattacaaac actccataca taagtttgaa ttgttgctgg ctgcaggaac 2281 cacaatacat attgtacctt acttttacct ctcgggattt acatattttc aggtgctgcg 2341 agttgtacga cttataaaag catcgcctat gttggagggc ttcgtctata agatttttgg 2401 tcccggcaaa aaacttggct ctctcatcac cttcactgtt tgcttgctca ttataagttc 2461 cagcatttca atgcaactgt tttgttttct ttgcgacttt acaaaattcg aaacattccc 2521 cgaggcattc atgtctatgt ttcagattct cactcaggaa gcttgggtag aggttatgga 2581 cgagactatg atacgtacta gtaagacatt aactccactg gtggccatat atttcatact 2641 ctatcacttg ttcgtaacac tcattgtgct gagtttgttc gtggcggtta ttttggataa 2701 cttggaattg gatgaggaca ttaagaaatt aaaacagctc aagttccgtg agcaaagtgc 2761 tgaaattaag gagaccctcc ccttccgatt gcgtatattt gaaaaattcc cgcagtcacc 2821 acagatgact atattacacc gcatacctaa tgatttcacg ttgccaaagg tacgggagtc 2881 atttatgaag caatttgtca ttgaacttga aacagatgat ccctcgatgg agagttgcaa 2941 gagacccatg tccgaatatt gggagtctaa aatggtattt cgcaaacaaa aaccagtaag 3001 aataatgaac aagacagcaa aagtgcgttc agctggaagt agtttaagaa aattggccat 3061 aacccatatt ataaatgatt cgaataatca acgtttgatg ctgggcgatt ctgccatgtt 3121 acccgtagtt ggtggaaaat gtggtttgaa gagtcaagga accataacac attccaaacc 3181 ctggagagtc gaccaaaaga acgtacgttc tggctctata aaactcaaac aaacctacga 3241 acatcttatg gaaaatggtg acatcgcttc ggcacctaga gcgaattctg gacgagcaag 3301 gccccatgat ttggacataa aactgttgca agctaaacgc caacaagccg aaatgagacg 3361 taatcaaaga gaagaagatt tgcgtgagaa ccatccattt ttcgatacgc ccttgtttct 3421 ggtaccaagg gaaagccgtt ttcgcaaaat ctgccagaaa atcgtgcacg gccgctatga 3481 tgctcgccta aaggatccac taacgggcaa ggagcgcaag gtccagtata aaagtttgca 3541 caactttttg ggtttggtaa cctacttaga ttgggttatg atatttgtta ccactttgtc 3601 ctgcatatcg atgatgtttg agacacccaa cgatcgtgtg atggatcatc ccacactgca 3661 aattgccgag tatacatttg ttatttttat gagtctagag ttagctttga aaattctggc 3721 ggatggttta ttctttactc ccaaggccta tataaaggat gtggcagcag ttttagatgt 3781 ctttatttat attgtatcta ctttattcct atgctggatg cctaagcaaa tacccaccaa 3841 ttcggctgct caattgctga tggttctacg ttgtatacgt cctttgcgaa tattcacatt 3901 agtgccgcac atgcgcaaag ttgtctatga actttgtcgt ggcttcaaag aaattctttt 3961 ggtatcaact ttactgattt tgctgatgtt catatttgcc agttatgggg tgcaattata 4021 tggtggacgt ttagcacgct gcaatgatcc cacgataaca aagcgtgaag attgtgttgg 4081 cgtcttcatg cgtcgtgtat ttgtcacaaa aatgaagctt accctcggag agggtgagtc 4141 gtatccggcc atgctggtgc caagagtatg ggctaatccc aggagattca atttcgacaa 4201 tattggagat gccatgctga ctttgtttga ggtcttgtcg ttcaaaggat ggctagatgt 4261 gagagatgtc ttaatcaagg tcgttggacc gattcaagcg gtctacatcc acatctatat 4321 tttcttgggc tgcatgattg gtctaacctt gtttgtgggt gtagtcattg ccaattattc 4381 agagaataaa ggcacagctc tactaactgt cgatcagaga cgttggtgcg atttgaagaa 4441 gagattgaaa atagcccagc ctttacactt gccaccccgt ccggacggac gaaaagttcg 4501 agcctttgct tacgatgtta ctcagcatat ttattttaag agattcatag cagcgatagt 4561 tttgataaac agtgcattat tgtcgataac gtggatcaaa ggcgaaagta taaccgaaat 4621 ctgcattttg ttaagtgtca ctttgacatt tgtatttgtt gtggaggtgg ttatgaaaat 4681 cattgcattt acaccacgtg gctattggca atcgcgacgt aatcgttatg acttattagt 4741 cactgtttct ggagtggttt ggatattctt acaaaccata ttgaggaatg atttgtctta 4801 ttttttcggt tttatggtgg taattttaag gtttttcacc attaccggca aacacaccac 4861 actaaaaatg ttgatgttga ctgttggtgt atctgtgtgc aaatcgttct tcattatatt 4921 cggaatgttt ttgctggtat tcttctatgc tttggctgga acgatccttt ttggtaccgt 4981 taagtatggt gaaggtattg gaagacgagc aaatttcggt tctccggtaa ccggagttgc 5041 catgttattt cgtattgtta cgggtgaaga ttggaacaaa ataatgcatg attgtatggt 5101 gcagccccca tactgtacgc cagggaataa ttattgggaa actgattgtg gcaactttac 5161 agccagtctt atatactttt gcacattcta cgtaattatc acctatatag tgctgaactt 5221 gcttgtggct attatcatgg agaacttttc attgttctac tctaatgagg aagatgcact 5281 gctctcttat gccgatatac gaaatttcca aaacacttgg aacattgtgg atatacacca 5341 acgtggtgtt ataccggtgc gcagagttaa atttatttta cgccttttaa aagggcgact 5401 tgagtgcgat ccgcagaagg accgattatt gtttaaatat atgtgctacg aattggacaa 5461 gctgcataat ggagaagatg ttaccttcca cgatgtgatc aatatgctct cctatcgctc 5521 agtggatatt cgaaaagcct tacagttgga ggagttactg gcacgtgaag aatttgagta 5581 tttggtggag gaagaagtag ccaagatgac cataagaaat tggttggaag gttgccttaa 5641 aaagataaga gcacaaaatg catataaaca gcaaaattct cttatagccg gattgcgtgc 5701 tactaacgag ccaatgataa ggcctagcgt gcaggaggac aaaacaccca ctggtatagg 5761 agagaaatcc gcaatcgcca ctattagtgg atctgtggcg gctgcaacat gtcctccaac 5821 aagcgatgct ttttcgccaa cattcagttc tactgaaaat gaggaaaaag atttaagtac 5881 cagcgcgata gccccaacac ctggcgctgc tgaaactgcc accgttcaag tgacccaacg 5941 tgccattaca gccacaaaac gaggctatgc cttaaatcgt tccgattcaa ccggaagttc 6001 tgccggtcga aaattccttg caccaacttc atcggatccc caacaacgct cgaccttaag 6061 tgataaagaa cgtttgcata taaccaatca gcagaagaag aagaactcaa tgaccacgag 6121 tacgctgccg gttgctccag cgccagttat ttccggtccg ggtcacaaga agaacagttt 6181 ctttgctgcc gacataagtc aattccacta tcccacgctc aatcattttg atcatggaca 6241 cattcccgca ctaggcagtc catcaggtct catgccccac ataatacctg gtactaaact 6301 gttaccgttt aataatcagg cgaatgcagt ctatgaagtt catgattggt ggcaggagca 6361 agttctctgc acgcagaata gcgatgatga aatgtagttt atatcgatta ccaaatagct 6421 tttaacgaaa acgcatcctc atgtacttag tttatatgcg aatatatttt ttatactgca 6481 ttcatatgta agtgcaacga agctaattat atacatacat ccatacatag atacatattt 6541 ttaagtaagt tgaatttaat gtaaacttgt tatatttgtg ttagttttct catatatagt 6601 gtatagaaat atattgttaa taaataagca gctgtattgt catattgtta ctatatcaaa 6661 tgagttgccg ctggttggcg aaaatttata tgattcacca taggatgggg gtatactact 6721 ttcgtcattc tgtttgtaac tcctcgaaat atgcttctca gaccccataa agtatatatg 6781 ttcttgatcg tcatgtcatt ttaagtcgat ctagccattt ccgtccgtcg gtctgtctgt 6841 cgaaagcacg ctaacttttg aagtagtaaa gctagccgct tgaaattttg cacaaatact 6901 ttttattagt gtaggtcggt tgggattgta aatgggccaa atcggcaaat gttttgatat 6961 agctgccata taaaccgatc atgggtcttg acttattgag cctctagagg gcgcaattct 7021 cgtccgattt gactgaaatt ttgcacatgg tgttttgtta tccaacaact gtact