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LOCUS XM_013256103 2046 bp mRNA linear INV 02-SEP-2023 ATP-dependent RNA helicase PRP16 (LOC106090051), transcript variant X3, mRNA. ACCESSION XM_013256103 VERSION XM_013256103.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013256103.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2046 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2046 /gene="LOC106090051" /note="pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:106090051" CDS 324..1928 /gene="LOC106090051" /codon_start=1 /product="pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X3" /protein_id="XP_013111557.2" /db_xref="GeneID:106090051" /translation="MDSTKFAIFFGNVPTFTIPGRTFPVDVLFGKNACEDYVESAVKQ ALQIHLTPNEGDMLIFMPGQEDIEVTCEVLAERLTEIDNAPELSILPIYSQLPSDLQA KIFQRSAEGLRKCVVATNIAETSLTVDGIIYVIDSGFCKLKVYNPRIGMDALQIYPIS QANANQRSGRAGRTGPGQAFRLYTQRQYKDELLPLTVPEIQRTNLANTVLLLKSLGVV DLLQFHFMDPPPQDNILNSLYQLWILGALDHTGALTPLGRQMAEFPLDPPQCQMLIVS CQMECSAEVLIIVSMLSVPSIFYRPKGREEEADGVREKFQVPESDHLTYLNVYLQWKQ NNYSSNWCNEHFIHVKAMRKVREVRQQLKDIMLQQKLTVKSCGTDWDIIRKCICSAYF YQAARLKGIGEYVNLRTGMPCHLHPTSALYGLGTTPDYVVYHELVMTAKEYMQCATAV DGYWLAELGPMFFSVKETGRSGREKKKQAAEHLKEMETQMRLAQEEMEERKLKAAQRE EQLANKQEIATPGHATPRRTPSKIGL" polyA_site 2046 /gene="LOC106090051" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tattatagcc gtggatagct accaaacgaa tgccgatgtt gataggcggg ataattaagg 61 tatggctcca ataggaagat tttggtcatt tgaaaaggac ggttaaaatt tgttggctac 121 gaggatgacg ttgtcatcat ggtgtgggcc gttcagagtg catatagtat gggccgttcg 181 gaatgcatat agtatgctgc caaaattgac caatgggctt gacgtaaacc tgcgaaagat 241 caagttggta ctattcacca atcataggta gcttgatcgt agcccgtaga cgtgacttaa 301 aactgattgt aacgtcagcc accatggact cgacaaagtt tgccatcttt tttggcaatg 361 taccgacctt cacaataccc ggacgtacat ttcctgtgga tgttttgttt ggcaaaaatg 421 cctgtgagga ttatgttgaa tcagctgtga agcaagcctt gcaaatccat ttaacgccca 481 atgagggcga catgttgatt ttcatgcccg gtcaagagga cattgaggtc acctgtgagg 541 tgttggcgga acgcttgact gaaattgaca atgctcccga actatccata ctgcccattt 601 attcacaact gccttcggac ttgcaggcga aaatatttca gcgttcagcc gagggtttac 661 gcaaatgtgt ggtggctacc aatattgccg aaacgtcttt gactgtggac ggtattatct 721 atgtcatcga ttcaggattt tgtaaattga aggtctataa tcctcgcatt ggtatggatg 781 ctttgcaaat ctatcccata tcacaagcta atgccaatca gcgctccggt cgtgctgggc 841 gtactggccc cggtcaagcg tttcgtttgt atacccaacg ccaatacaag gatgaacttt 901 tgccactaac tgtacctgaa attcaacgaa ctaatttggc caatacagta ttgctgttaa 961 aatccttagg tgttgtcgat ttgcttcaat tccatttcat ggacccccca ccccaggata 1021 acatattgaa ttctctgtac caactttgga tattgggtgc cttagaccat acaggagctc 1081 taacgccact ggggcgacag atggccgaat ttccactgga tcctccgcaa tgtcaaatgt 1141 taattgtctc ctgtcaaatg gaatgtagtg ctgaagtctt gataatagtc tctatgctat 1201 cggtgccatc tatattctac cgtcccaagg gccgagaaga ggaggcagat ggtgtacgtg 1261 aaaagttcca agtaccggaa tctgaccatt tgacatatct caatgtgtat ttacaatgga 1321 agcaaaataa ttacagttcc aattggtgca atgaacattt cattcatgtc aaggctatgc 1381 gtaaggtgcg ggaagttcga caacaactca aggatattat gcttcaacaa aagctaaccg 1441 taaagtcatg cggcaccgat tgggatatca taagaaaatg tatttgctct gcttatttct 1501 atcaagcggc tcgcctaaag ggtattggcg aatatgttaa cttgcgtact ggcatgccat 1561 gtcacctcca tcctacttca gctttatacg gtcttggtac cacaccagat tatgtagtct 1621 accatgaatt ggttatgacg gccaaggaat atatgcaatg cgccactgcc gtcgatggtt 1681 attggttggc tgaattgggt cccatgttct tttccgttaa ggagactgga cgtagtggtc 1741 gcgagaagaa gaaacaagct gccgaacacc tcaaggaaat ggaaacgcaa atgcgtttag 1801 cccaagagga aatggaggag cggaaactaa aagcagctca acgggaggag caacttgcaa 1861 ataaacaaga aatagctact ccaggacacg caacaccccg gcgtactcct tccaaaattg 1921 gcttgtaatt gacaaaagag agaaactaaa tttaatagta ttttgtctaa atagcgaaat 1981 atccttttga ctaattttgt gcaaaaaaac taaaaaaaat aaaaataaat cggtttttga 2041 aggcaa