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LOCUS XM_013256102 1905 bp mRNA linear INV 02-SEP-2023 ATP-dependent RNA helicase PRP16 (LOC106090051), transcript variant X2, mRNA. ACCESSION XM_013256102 VERSION XM_013256102.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013256102.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1905 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..1905 /gene="LOC106090051" /note="pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:106090051" CDS 105..1787 /gene="LOC106090051" /codon_start=1 /product="pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X2" /protein_id="XP_013111556.2" /db_xref="GeneID:106090051" /translation="MPMLIGGIIKIVARRRDLKLIVTSATMDSTKFAIFFGNVPTFTI PGRTFPVDVLFGKNACEDYVESAVKQALQIHLTPNEGDMLIFMPGQEDIEVTCEVLAE RLTEIDNAPELSILPIYSQLPSDLQAKIFQRSAEGLRKCVVATNIAETSLTVDGIIYV IDSGFCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAFRLYTQRQYKDEL LPLTVPEIQRTNLANTVLLLKSLGVVDLLQFHFMDPPPQDNILNSLYQLWILGALDHT GALTPLGRQMAEFPLDPPQCQMLIVSCQMECSAEVLIIVSMLSVPSIFYRPKGREEEA DGVREKFQVPESDHLTYLNVYLQWKQNNYSSNWCNEHFIHVKAMRKVREVRQQLKDIM LQQKLTVKSCGTDWDIIRKCICSAYFYQAARLKGIGEYVNLRTGMPCHLHPTSALYGL GTTPDYVVYHELVMTAKEYMQCATAVDGYWLAELGPMFFSVKETGRSGREKKKQAAEH LKEMETQMRLAQEEMEERKLKAAQREEQLANKQEIATPGHATPRRTPSKIGL" polyA_site 1905 /gene="LOC106090051" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tcaattagct gcataggttt tacccacaaa accaaccaaa gccatcttgg caggtttaaa 61 tagttttcat tagattatta tagccgtgga tagctaccaa acgaatgccg atgttgatag 121 gcgggataat taagatcgta gcccgtagac gtgacttaaa actgattgta acgtcagcca 181 ccatggactc gacaaagttt gccatctttt ttggcaatgt accgaccttc acaatacccg 241 gacgtacatt tcctgtggat gttttgtttg gcaaaaatgc ctgtgaggat tatgttgaat 301 cagctgtgaa gcaagccttg caaatccatt taacgcccaa tgagggcgac atgttgattt 361 tcatgcccgg tcaagaggac attgaggtca cctgtgaggt gttggcggaa cgcttgactg 421 aaattgacaa tgctcccgaa ctatccatac tgcccattta ttcacaactg ccttcggact 481 tgcaggcgaa aatatttcag cgttcagccg agggtttacg caaatgtgtg gtggctacca 541 atattgccga aacgtctttg actgtggacg gtattatcta tgtcatcgat tcaggatttt 601 gtaaattgaa ggtctataat cctcgcattg gtatggatgc tttgcaaatc tatcccatat 661 cacaagctaa tgccaatcag cgctccggtc gtgctgggcg tactggcccc ggtcaagcgt 721 ttcgtttgta tacccaacgc caatacaagg atgaactttt gccactaact gtacctgaaa 781 ttcaacgaac taatttggcc aatacagtat tgctgttaaa atccttaggt gttgtcgatt 841 tgcttcaatt ccatttcatg gaccccccac cccaggataa catattgaat tctctgtacc 901 aactttggat attgggtgcc ttagaccata caggagctct aacgccactg gggcgacaga 961 tggccgaatt tccactggat cctccgcaat gtcaaatgtt aattgtctcc tgtcaaatgg 1021 aatgtagtgc tgaagtcttg ataatagtct ctatgctatc ggtgccatct atattctacc 1081 gtcccaaggg ccgagaagag gaggcagatg gtgtacgtga aaagttccaa gtaccggaat 1141 ctgaccattt gacatatctc aatgtgtatt tacaatggaa gcaaaataat tacagttcca 1201 attggtgcaa tgaacatttc attcatgtca aggctatgcg taaggtgcgg gaagttcgac 1261 aacaactcaa ggatattatg cttcaacaaa agctaaccgt aaagtcatgc ggcaccgatt 1321 gggatatcat aagaaaatgt atttgctctg cttatttcta tcaagcggct cgcctaaagg 1381 gtattggcga atatgttaac ttgcgtactg gcatgccatg tcacctccat cctacttcag 1441 ctttatacgg tcttggtacc acaccagatt atgtagtcta ccatgaattg gttatgacgg 1501 ccaaggaata tatgcaatgc gccactgccg tcgatggtta ttggttggct gaattgggtc 1561 ccatgttctt ttccgttaag gagactggac gtagtggtcg cgagaagaag aaacaagctg 1621 ccgaacacct caaggaaatg gaaacgcaaa tgcgtttagc ccaagaggaa atggaggagc 1681 ggaaactaaa agcagctcaa cgggaggagc aacttgcaaa taaacaagaa atagctactc 1741 caggacacgc aacaccccgg cgtactcctt ccaaaattgg cttgtaattg acaaaagaga 1801 gaaactaaat ttaatagtat tttgtctaaa tagcgaaata tccttttgac taattttgtg 1861 caaaaaaact aaaaaaaata aaaataaatc ggtttttgaa ggcaa