Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

PREDICTED: Stomoxys calcitrans probable cytochrome P450 28c1


LOCUS       XM_013256015            1481 bp    mRNA    linear   INV 02-SEP-2023
            (LOC106089990), transcript variant X3, mRNA.
ACCESSION   XM_013256015
VERSION     XM_013256015.1
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1481
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1481
                     /gene="LOC106089990"
                     /note="probable cytochrome P450 28c1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins"
                     /db_xref="GeneID:106089990"
     CDS             105..1385
                     /gene="LOC106089990"
                     /codon_start=1
                     /product="probable cytochrome P450 28c1 isoform X3"
                     /protein_id="XP_013111469.1"
                     /db_xref="GeneID:106089990"
                     /translation="MRTPTLMIIDPHIVHNIFVTSFNHFNDNDVGKLIDCRKDPLIAN
                     NPFILVGEKWRLQRSLISPALTSFRLRQCYHAMPKICDQMNDFIVNKGLLNINGKDVC
                     MLALRFTAESLSDCVLGMESKSFTQTPLPISENVNKFASDNIAFSIFTLISGLLPILL
                     KYYKAKFFPSDCENFFMDLMSNAYNMRYAKATEKNDILDHLIKIKELYKLTDMEIYSH
                     TMTFLIDGLDTTATVISHCLLMLAKEPLTQRALYEEICLNYDDQHGITFDKLNEMPYL
                     DACIHETLRIYPPGLWSTKCCTKTYQMSNKDGKILTLNEGEPVIIPIYAFHHDAQYYP
                     EPEIFKPERFLPENGGVKHFRDCGVFLGFGDGPRTCIGKRFALLQSKSAVAYLVRTFQ
                     VKLNKRTKPDFRLDPKSFLALHNGGVWLDFQRRS"
     misc_feature    105..1361
                     /gene="LOC106089990"
                     /note="cytochrome P450 family 6 and similar cytochrome
                     P450s; Region: CYP6-like; cd11056"
                     /db_xref="CDD:410679"
     misc_feature    order(264..266,276..278,297..299,441..443,765..770,
                     777..782,789..794,801..803,954..956,981..983,987..989,
                     1071..1073,1188..1196,1206..1220,1227..1232)
                     /gene="LOC106089990"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:410679"
     misc_feature    order(519..524,765..767,774..779,789..791,975..986)
                     /gene="LOC106089990"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]; other site"
                     /db_xref="CDD:410679"
     polyA_site      1481
                     /gene="LOC106089990"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ggacccaaac ctcgtgctct ctttgggtcc tatccaaacc tgttgctgcg cagacaacat
       61 tttggcgttt tcagtcgaca gacaaatttg tgggcactta tctgatgcgc acgccaacat
      121 tgatgattat agatccacac attgtgcata atatatttgt aacttcattc aaccatttca
      181 acgataacga tgttgggaaa ttgattgatt gcagaaaaga tccgctgatt gccaacaatc
      241 cttttatatt agtgggtgaa aaatggcgcc ttcaacgatc tctcatatca cctgctttga
      301 ccagtttccg cttaagacaa tgttaccatg ctatgcccaa gatatgcgat cagatgaatg
      361 attttattgt taacaaagga ctattgaata tcaatggaaa ggatgtatgt atgcttgcat
      421 tgcggttcac agcagagagc ttaagcgatt gtgtattggg tatggaatcg aaaagtttta
      481 cacaaactcc attaccaata tcagaaaatg ttaacaaatt tgccagtgac aatattgcct
      541 ttagcatatt tactttaatc agtggcttgt tgccaattct tttgaaatat tataaagcaa
      601 aattctttcc ctcggactgt gagaattttt ttatggatct tatgagtaat gcttataata
      661 tgcgttacgc caaggctacc gaaaagaatg atattctaga tcatttaatt aaaataaaag
      721 agctgtataa actcacggat atggaaatat attcacatac catgacattt ttaatagatg
      781 gtctggacac gacagcgaca gtaatttctc attgtttgct aatgttggct aaagagcctt
      841 taactcaaag ggcattgtat gaagaaatct gcttgaacta tgatgatcaa catggaatca
      901 cttttgataa attaaatgaa atgccgtatt tggatgcctg tatacacgaa actcttcgta
      961 tctatcctcc tggtttatgg tctactaaat gttgcacaaa gacttatcaa atgtcgaaca
     1021 aagatggtaa aattctcaca ctgaacgagg gtgagccggt aataatccca atttatgctt
     1081 tccatcacga tgctcaatac taccccgaac cggaaatatt caaacctgaa cgatttctac
     1141 cagaaaatgg gggagtaaaa cattttcgcg attgtggagt attcttggga tttggagatg
     1201 gtcctcgcac ttgcataggt aaacgttttg cattgcttca atctaaatct gcagtagcat
     1261 atcttgttag gacgtttcaa gttaaattga acaaaagaac taaacccgat tttaggcttg
     1321 accctaaaag ttttctggca ttgcataacg gtggagtttg gctagacttt caaaggaggt
     1381 cctaaataat gacttaagca ggggtataca atgtatacta tacgtaaata aattcgaata
     1441 aattgtccta cttctaaaat ataattttaa tttatcaata a