Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_013255885 2573 bp mRNA linear INV 02-SEP-2023 homolog (LOC106089890), mRNA. ACCESSION XM_013255885 VERSION XM_013255885.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013255885.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2573 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2573 /gene="LOC106089890" /note="ribosomal RNA processing protein 1 homolog; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:106089890" CDS 70..2412 /gene="LOC106089890" /codon_start=1 /product="ribosomal RNA processing protein 1 homolog" /protein_id="XP_013111339.2" /db_xref="GeneID:106089890" /translation="MVVMAPVKKPRRDFKSENFEQEQSDNEDIMDENPSPGEEEISQE VKIIAQEVRIVKSLACNDLTKRNKQMKKLRRWLQLRAQSSFPFKQEDFVRIWKGLYYN MWYSDKPLVQEELAEQLGKLLECFDGNLEQSVNFFGAFLETMCIQWFGIDQWRIDKFL MLTRRMLRYMFKVLKANKWGQHAVEVFNKHATESVLNENTTAKGLTMHYLDIFFEELA KVSEGDISSEQVALFVRPFVAFTTTQKDFQLISHCRSRVFYHLLYQSDLGREYSEKYN AWKEMGFPTKHIDDLERCEESENEDNPEQQEEAEEGDAANGTRHLDPRAGNVDVFMPV LPLDAQTIIKDLEDFLYKTECATKRRKVLRKLLEVFKTYQNGVFPLGIKTMPRFEEKS EKPLIKDKIRQLENLENELYGVDRKLKQLTKRKRRKLLKSINYDDIDESNYEQKLEKA LPKDYLVERRKKSQKAFMAAWLEEELDEEDLRPMETVNLENGIGKENNVTNERQKKPK KQKLLKQNSEEKDEPQKKQKKLEKSSDQITSNELNSSKKFKKGNSSTDILNEKPESPD KNSSTVTETLQRSSSTAEALDISKSKPKETKVLKISDANELLTPKSKPKETKVLKISD PGEELTPKTSKKLTKTITSTPLNEWDEPLAEGEIEYFLPSRKLQLKKANADLVPNPLA KNRLAANPSTPVNSKKMSLSTANTPNTPGSSKRVKIALKHNTSQNPAEYIQQIKSSPN IPFDAKKKPGKGLLKPNAMPSPINPFYKKKIGLKLLNDTI" polyA_site 2573 /gene="LOC106089890" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 acagtggaac acgtgtttat aaaaacaaat cgctagaaat attcgatatt tctgcaagta 61 gagaatataa tggttgtaat ggctccggtt aaaaaaccta gacgagattt taaatcggaa 121 aactttgaac aagagcagtc ggacaatgag gatattatgg atgaaaaccc aagtcccgga 181 gaggaagaaa tatctcaaga agttaaaatt atcgcacaag aagtcaggat tgtaaagtcg 241 ctggcctgta atgacttgac caagcgaaat aaacaaatga aaaagttaag aagatggcta 301 cagttgcgtg ctcagtcttc gtttcccttc aaacaagaag attttgtgag aatttggaag 361 ggtctgtatt ataatatgtg gtattcggat aaacctttgg tgcaagaaga actggccgag 421 cagctgggga aactgttgga atgcttcgat ggtaatttgg agcagagtgt aaatttcttt 481 ggtgcattcc tggagactat gtgtattcaa tggtttggca tagatcagtg gcgcattgac 541 aaattcctta tgttgacaag gcgcatgttg cgctacatgt tcaaggtgct aaaggcaaat 601 aagtggggtc agcatgccgt agaagtcttt aacaagcatg ccacagaatc tgttttgaat 661 gaaaatacca ccgctaaggg tttaactatg cactatctgg atattttctt tgaagaattg 721 gccaaggtgt cggaaggaga tatatcttca gagcaggtgg cattgttcgt tagacctttt 781 gtggctttta caacaactca aaaagatttc cagctgattt cgcattgtcg cagcagagtg 841 ttttaccatt tgttatatca aagtgacttg ggcagagaat attcggaaaa gtataacgct 901 tggaaagaaa tgggatttcc tacaaagcac attgatgact tggagaggtg tgaagaatca 961 gaaaacgagg acaatcccga acagcaagaa gaggcggaag aaggcgacgc tgccaatggt 1021 acaagacatt tagatccacg tgctggtaat gtggacgtat ttatgccggt tttgccgtta 1081 gatgctcaaa caattattaa ggatttggaa gatttcttat acaagacgga atgtgccact 1141 aagcgccgaa aggttttaag aaaactatta gaagtcttca agacatatca aaatggtgta 1201 tttcctttgg gcattaaaac tatgccacga tttgaagaga aatctgaaaa gccattgata 1261 aaagataaaa taagacagct ggaaaatttg gaaaatgaac tctatggtgt tgatagaaaa 1321 cttaaacaat tgacaaaacg taagaggagg aaacttttaa aatcgattaa ctacgacgat 1381 attgatgaga gtaattacga gcaaaagttg gaaaaggctt tgccgaaaga ctatttggtg 1441 gaacgtagaa aaaaatctca aaaggctttc atggcggcat ggctcgaaga agagttggat 1501 gaagaagacc ttaggccaat ggaaacagtt aatctagaaa atggcattgg aaaagaaaac 1561 aatgtgacaa atgaaagaca aaagaaacct aaaaaacaaa agttgttaaa acaaaactct 1621 gaagaaaaag atgaaccgca aaagaaacaa aaaaagttgg aaaagtcttc ggatcagatt 1681 accagcaacg aattaaactc aagtaaaaaa tttaaaaagg gcaattcttc tacagacatt 1741 ctaaacgaaa aaccagaatc acccgataaa aactcatcga cagttacgga aacactgcag 1801 agaagttcaa gtaccgctga agccctggac atttcgaaat caaaaccaaa agagacaaaa 1861 gttttgaaaa tttccgatgc taacgaactg ttgacaccaa aatctaaacc taaagagaca 1921 aaagttttaa aaatttccga tcctggcgaa gaattgactc caaaaactag caagaaactc 1981 acgaaaacaa taacatcaac gcccctcaat gaatgggatg aacctttggc cgagggtgaa 2041 attgaatact ttttgccttc gcgaaagctt caattgaaga aagccaatgc tgacttggtt 2101 cccaatccat tggccaaaaa ccgtcttgca gccaatccat ctacacctgt gaactctaag 2161 aaaatgtcct tgtcaacagc taataccccc aacactccag gcagttcaaa gcgtgttaaa 2221 atcgcattaa aacacaatac ttcacaaaac cccgctgaat acatacagca aataaaaagc 2281 tctccaaata ttccttttga tgccaagaaa aaaccgggta aaggtctgct aaaaccaaat 2341 gcaatgccca gcccaatcaa tcctttttac aagaaaaaaa ttggcttaaa attgctaaat 2401 gatacgatat gatactgttg caggaaaata ttatttttta aatagtaagt caaatcaatg 2461 tttttacaat gaaaaatcta gacttttaaa tcagtaagct tgactagtga caagtagtag 2521 tatggtcttt tcggattatg gtaaaataaa tgaatgtgaa tacaaaaaca ata