PREDICTED: Stomoxys calcitrans ATP synthase subunit gamma,

LOCUS       XM_013255880            1226 bp    mRNA    linear   INV 02-SEP-2023
            mitochondrial (LOC106089888), transcript variant X1, mRNA.
ACCESSION   XM_013255880
VERSION     XM_013255880.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013255880.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1226
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1226
                     /gene="LOC106089888"
                     /note="ATP synthase subunit gamma, mitochondrial; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 31 Proteins"
                     /db_xref="GeneID:106089888"
     CDS             142..1038
                     /gene="LOC106089888"
                     /codon_start=1
                     /product="ATP synthase subunit gamma, mitochondrial"
                     /protein_id="XP_013111334.1"
                     /db_xref="GeneID:106089888"
                     /translation="MFAQRTSALLVPLAVEATLQAQQQRGMATLKAISIRLKSVKNIQ
                     KITQSMKMVSAAKYSRAERDLKAARPYGLGAQQFFEKTEIQPDEKAEQKKLYIAMTSD
                     RGLCGAVHTGVARFIRNEMGKDSSNTKIICVGDKSRSILSRLYGKEILFVANEVGRLP
                     PTFIDASRIAHEVMKCGYDFTEGSIVFNRFKSVVSYQCSTLPIFSSPTVEKSDKLAVY
                     DSLDADVIQSYLEYSLASLIFYTMKESACSEQSSRMTAMDNASKNAGEMIEKLTLTFN
                     RTRQAVITRELIEIISGAAALD"
     misc_feature    223..1023
                     /gene="LOC106089888"
                     /note="mitochondrial ATP synthase gamma subunit; Region:
                     F1-ATPase_gamma; cd12151"
                     /db_xref="CDD:213394"
     misc_feature    order(232..234,247..249,265..267,277..279,286..291,
                     295..300,307..312,448..450,454..465,544..549,556..561,
                     568..570,919..921,928..933,940..942,958..960,967..972,
                     976..981,988..993,1000..1002,1006..1023)
                     /gene="LOC106089888"
                     /note="core domain interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:213394"
     misc_feature    order(340..345,349..354,361..363,370..375,814..816,
                     823..828,835..837)
                     /gene="LOC106089888"
                     /note="delta subunit interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:213394"
     misc_feature    order(553..555,589..606,823..825,832..837)
                     /gene="LOC106089888"
                     /note="epsilon subunit interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:213394"
     polyA_site      1226
                     /gene="LOC106089888"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttgacggcaa ttatcagcta tctcattaga ccaaaaaaat caactgtggc aatactatcc
       61 attctcctta cataagaggt agcccctgtc agtgtgtcag tcgtgtcgtg aaaaattctg
      121 ccaactacac ggatcaacaa aatgtttgcc caacgtactt ctgctctttt ggtccccttg
      181 gccgttgagg ctactttgca ggctcaacag cagcgtggta tggctacctt aaaagccatt
      241 tccatccgct tgaagtccgt taagaatatt cagaagatta cgcaatccat gaagatggtg
      301 tcagctgcca aatattcgcg tgctgaacgt gatttgaagg ctgcccgtcc ctatggcttg
      361 ggcgcccaac aattctttga gaagaccgaa atccaacccg acgaaaaggc tgaacagaag
      421 aaattgtaca ttgccatgac ctctgatcgt ggtttgtgcg gcgctgtgca caccggtgtt
      481 gctcgtttca ttcgtaatga aatgggcaag gacagctcta acaccaaaat catctgtgtg
      541 ggtgacaaat cccgttccat tttgtcccgt ttgtatggca aggaaatttt gtttgttgcc
      601 aatgaggttg gccgtttgcc tcctaccttc attgatgctt ctcgcattgc tcatgaagtg
      661 atgaagtgtg gctacgactt cactgagggc agcatcgtct tcaaccgttt caagtcggtt
      721 gtgtcctacc aatgttccac attgcccatc tttagttcac ccacagtcga aaagtccgac
      781 aagttggctg tatacgactc tttggatgcc gacgttattc agagctactt ggaatattcg
      841 ttggcctccc tcatcttcta caccatgaag gagagcgctt gctccgaaca atcttctcgc
      901 atgactgcca tggacaatgc ttccaagaac gccggtgaaa tgattgagaa gttgacattg
      961 acattcaacc gtaccagaca ggctgtcatt actcgtgagt tgattgaaat catctctggt
     1021 gctgctgctc tggattaagc attctatact gctactagcc agccttaggc ataataatac
     1081 aattcgaaag aaactcccaa aacagaaatt caaacgaatt aaaaattcaa aacaacatta
     1141 taacagcaac cgcatatttt gtagttgcat tccagttttg gtttacgatg caaagagaaa
     1201 ttcaataaag aaacacaaaa cactga