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LOCUS XM_013255878 1567 bp mRNA linear INV 02-SEP-2023 (LOC106089885), transcript variant X2, mRNA. ACCESSION XM_013255878 VERSION XM_013255878.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013255878.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1567 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..1567 /gene="LOC106089885" /note="peptidoglycan recognition protein; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins" /db_xref="GeneID:106089885" CDS 355..1335 /gene="LOC106089885" /codon_start=1 /product="peptidoglycan recognition protein isoform X2" /protein_id="XP_013111332.1" /db_xref="GeneID:106089885" /translation="MSMPSQNEKLRLSEEKARSWLTSIDPSDLDDLESVVDSIVDSDL RDSSDTESDHLSDSDEEQYNDISQLKLSNELNGLEQIVSRLAPPSFGNVSMNNCSNVV LGNIIKLKINVKNDKDEESTCAEEREENTGVEQPVIVNRTKKPVYRPACLIIPRARWL AMEPLNDYNPIDVPVDLVIISHTATTSSTKQAENIGIIRDIQTFHIETRGWDDIGYNF LIGCDGNVYEGRGWGVEGAHTFKYNNLSIGISFIGCFIQKLPSPRALEACKNLLKLGV EEGHLTTNFKLLGHRQCMSTQSPGNTLYDEIKTWEHFQDLPQVDMEPDAK" misc_feature 805..1233 /gene="LOC106089885" /note="Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme; Region: PGRP; smart00701" /db_xref="CDD:128941" misc_feature order(895..897,1000..1002,1222..1224,1240..1242, 1246..1248) /gene="LOC106089885" /note="amidase catalytic site [active]" /db_xref="CDD:133475" misc_feature order(895..897,1222..1224,1246..1248) /gene="LOC106089885" /note="Zn binding residues [ion binding]; other site" /db_xref="CDD:133475" misc_feature order(898..903,988..990,1000..1002,1042..1044,1063..1068, 1081..1083,1222..1224,1234..1236,1240..1248) /gene="LOC106089885" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:133475" ORIGIN 1 gcaacagttt gctttatatc tgtggaatac tcctgtacaa ataatcttca aatctgttag 61 gagaaacgaa gatcgacaaa gaagaagaaa actaacccgt tactcggata tgtaactaca 121 gttcatttgc ccagctgatc agagctaaag ctataaaaaa attaatattt ataaatagta 181 aaattttgca aatttataat tttgtataca agtatttgct accaaaacat ttacaaatca 241 agtgtgaccg catgcaattt tttaactcac atcttgattg tattccaaat caagataaag 301 gaaaagacgt gagggaaaaa ttaaatcctg ttctaaccat tggacaacta cgacatgagt 361 atgccgagcc aaaacgaaaa attacgttta agtgaagaaa aggcaaggag ttggcttaca 421 tccatagatc cttccgattt agatgatttg gaatcagttg tggattcaat tgtcgattcg 481 gatttacgag actccagtga cacagaatca gaccatctct ccgattctga cgaagagcaa 541 tacaatgaca tatcccagct aaaattgtcc aatgagctca atggcttgga acaaatcgtt 601 agccgtttag ctccaccatc ttttggtaat gttagcatga acaactgtag caatgttgtt 661 ttgggcaata tcataaagtt gaaaatcaat gtcaaaaatg acaaggacga agaaagtact 721 tgtgccgaag aacgagagga aaacacagga gtggagcagc ctgttatagt aaaccgaacc 781 aaaaaaccag tttataggcc agcttgcctt atcataccaa gagctagatg gttagcaatg 841 gaacctttga atgattacaa tcccattgat gtgccagtag atttagtcat aatttcccat 901 acagcaacaa caagttccac taaacaggca gaaaatattg gaattatacg agatatacaa 961 acctttcaca ttgagactcg tggctgggat gatattggat acaattttct aattgggtgt 1021 gatggaaatg tgtatgaagg tcgcggctgg ggcgttgaag gtgcccacac attcaagtac 1081 aataatttgt ccataggaat ttcgtttatt ggatgcttta ttcaaaaatt gccttcaccg 1141 cgagctctgg aagcatgtaa aaatttgcta aaacttggag tggaagaagg tcacttaact 1201 acaaatttca aattattggg gcatcgacaa tgcatgagta cccaaagccc cggtaatact 1261 ctatacgatg aaataaaaac atgggaacac tttcaagact taccacaagt ggatatggaa 1321 ccggatgcaa aatgattgac ggaaatgttt gaagaatgtt cttctgaaac aaagaattta 1381 aatgtgatga caaatttgag caactcaagg agttcttctt tactagtttt accaaatgta 1441 tattagttac tttatgcatt tgtaagtata tactttacga ttctatttta ccaatagatt 1501 tgtgcttggc attacctcaa aggttaaatt caatttaact tcatgtaatg gaacatacat 1561 tgttttt