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LOCUS XM_013255877 1626 bp mRNA linear INV 02-SEP-2023 (LOC106089885), transcript variant X1, mRNA. ACCESSION XM_013255877 VERSION XM_013255877.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013255877.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1626 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..1626 /gene="LOC106089885" /note="peptidoglycan recognition protein; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins" /db_xref="GeneID:106089885" CDS 357..1394 /gene="LOC106089885" /codon_start=1 /product="peptidoglycan-recognition protein LE isoform X1" /protein_id="XP_013111331.1" /db_xref="GeneID:106089885" /translation="MSMPSQNEKLRLSEEKARSWLTSIDPSDLDDLESVVDSIVDSDL RDSSDTESGEEHALGTRSINQPTKLTTNHLSDSDEEQYNDISQLKLSNELNGLEQIVS RLAPPSFGNVSMNNCSNVVLGNIIKLKINVKNDKDEESTCAEEREENTGVEQPVIVNR TKKPVYRPACLIIPRARWLAMEPLNDYNPIDVPVDLVIISHTATTSSTKQAENIGIIR DIQTFHIETRGWDDIGYNFLIGCDGNVYEGRGWGVEGAHTFKYNNLSIGISFIGCFIQ KLPSPRALEACKNLLKLGVEEGHLTTNFKLLGHRQCMSTQSPGNTLYDEIKTWEHFQD LPQVDMEPDAK" misc_feature 864..1292 /gene="LOC106089885" /note="Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme; Region: PGRP; smart00701" /db_xref="CDD:128941" misc_feature order(954..956,1059..1061,1281..1283,1299..1301, 1305..1307) /gene="LOC106089885" /note="amidase catalytic site [active]" /db_xref="CDD:133475" misc_feature order(954..956,1281..1283,1305..1307) /gene="LOC106089885" /note="Zn binding residues [ion binding]; other site" /db_xref="CDD:133475" misc_feature order(957..962,1047..1049,1059..1061,1101..1103, 1122..1127,1140..1142,1281..1283,1293..1295,1299..1307) /gene="LOC106089885" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:133475" ORIGIN 1 cagcaacagt ttgctttata tctgtggaat actcctgtac aaataatctt caaatctgtt 61 aggagaaacg aagatcgaca aagaagaaga aaactaaccc gttactcgga tatgtaacta 121 cagttcattt gcccagctga tcagagctaa agctataaaa aaattaatat ttataaatag 181 taaaattttg caaatttata attttgtata caagtatttg ctaccaaaac atttacaaat 241 caagtgtgac cgcatgcaat tttttaactc acatcttgat tgtattccaa atcaagataa 301 aggaaaagac gtgagggaaa aattaaatcc tgttctaacc attggacaac tacgacatga 361 gtatgccgag ccaaaacgaa aaattacgtt taagtgaaga aaaggcaagg agttggctta 421 catccataga tccttccgat ttagatgatt tggaatcagt tgtggattca attgtcgatt 481 cggatttacg agactccagt gacacagaat caggtgaaga gcatgcattg ggtactcgga 541 gtattaacca accaacgaaa ctaacaacaa accatctctc cgattctgac gaagagcaat 601 acaatgacat atcccagcta aaattgtcca atgagctcaa tggcttggaa caaatcgtta 661 gccgtttagc tccaccatct tttggtaatg ttagcatgaa caactgtagc aatgttgttt 721 tgggcaatat cataaagttg aaaatcaatg tcaaaaatga caaggacgaa gaaagtactt 781 gtgccgaaga acgagaggaa aacacaggag tggagcagcc tgttatagta aaccgaacca 841 aaaaaccagt ttataggcca gcttgcctta tcataccaag agctagatgg ttagcaatgg 901 aacctttgaa tgattacaat cccattgatg tgccagtaga tttagtcata atttcccata 961 cagcaacaac aagttccact aaacaggcag aaaatattgg aattatacga gatatacaaa 1021 cctttcacat tgagactcgt ggctgggatg atattggata caattttcta attgggtgtg 1081 atggaaatgt gtatgaaggt cgcggctggg gcgttgaagg tgcccacaca ttcaagtaca 1141 ataatttgtc cataggaatt tcgtttattg gatgctttat tcaaaaattg ccttcaccgc 1201 gagctctgga agcatgtaaa aatttgctaa aacttggagt ggaagaaggt cacttaacta 1261 caaatttcaa attattgggg catcgacaat gcatgagtac ccaaagcccc ggtaatactc 1321 tatacgatga aataaaaaca tgggaacact ttcaagactt accacaagtg gatatggaac 1381 cggatgcaaa atgattgacg gaaatgtttg aagaatgttc ttctgaaaca aagaatttaa 1441 atgtgatgac aaatttgagc aactcaagga gttcttcttt actagtttta ccaaatgtat 1501 attagttact ttatgcattt gtaagtatat actttacgat tctattttac caatagattt 1561 gtgcttggca ttacctcaaa ggttaaattc aatttaactt catgtaatgg aacatacatt 1621 gttttt