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LOCUS XM_013255874 3652 bp mRNA linear INV 02-SEP-2023 (LOC106089883), transcript variant X2, mRNA. ACCESSION XM_013255874 VERSION XM_013255874.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013255874.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3652 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3652 /gene="LOC106089883" /note="RNA-binding protein 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins" /db_xref="GeneID:106089883" CDS 129..1601 /gene="LOC106089883" /codon_start=1 /product="integrator complex subunit 6 homolog isoform X1" /protein_id="XP_013111328.2" /db_xref="GeneID:106089883" /translation="MPRYREWDLACKVYVGNLGSSASKYEIENAFSKYGPLRNVWVAR NPPGFAFVEFEDRRDAEDATRALDGTRCCGTRIRVEMSSGRSRREGSRRRGGNSGGGG GRSAGESAGSGRGAVAGGSARYRKIKSTSASTTTTSTTICCTTSTSITTTNYSSSYYY KKSVNNFSFNNNNDYSNNLSSKKRNIFINTLPPPPPTATTTTTATATYFLIIKNNNCT RKIITITSNTNYTPILLLTDDIFMTLDTKIHYLPYDYYIALDLLLGFIIFAMVWTTQL RTTTTTKIHTPMRRGRRPRQRTCLVPQLSLNGSMNVVVVVLTMNVVVLKQIHQNLNYH QIHYHLPPPPPPPPQPRTTTIHHCHEYSNCSCCSSSTSSLMNDIISSTTSPINNNLQR FDYYLFFFYRRVVIVSTINISSATATITTTSSTKKNIKTITKKQQLLYCPIQGQIQLP QPASSLIRPPLAVVHEILTTLLPLLLLLLPPPNLSLPPPT" polyA_site 3652 /gene="LOC106089883" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tctgtcaaaa cttgattaaa agtaaaaaat ttgtacaaaa aatttataaa tttgtacaaa 61 actaaagatt ttaaagaatc gattatattc taagacagtt cacaaaccta ggctaaaaac 121 aaacaaatat gccacgctat cgtgaatggg atttggcctg caaagtctat gtgggcaatt 181 tgggatcatc agcgtcaaaa tatgaaattg aaaacgcatt tagcaaatac ggcccactgc 241 gtaatgtctg ggttgcacgc aaccctcctg gttttgcttt tgttgaattc gaagacagac 301 gtgatgccga agacgcaacc cgagccctag atggaactcg ttgctgtggt acccgcatac 361 gtgtagaaat gtcctctgga cgttcacgca gagaaggaag cagacgccgt ggcggtaaca 421 gtggtggcgg aggaggccgc agcgctggcg aatctgctgg cagtggccgt ggagcagtag 481 cgggcggaag tgcacgctac cggaaaataa agtcaacttc tgcttcaact actactacct 541 ccactactat ttgttgtacc acaagtacat ctattactac taccaactac tcctcttcct 601 actactacaa aaaatcagtc aacaacttca gcttcaacaa caacaacgac tacagcaaca 661 acctcagctc gaaaaaaaga aacattttca tcaacacact acctccacca ccaccgacag 721 caacaacaac aacaacagct acagcaacat atttcctcat cattaagaat aataattgta 781 caagaaaaat catcacaatc acttctaaca ccaactatac accaatactc ctcctgaccg 841 acgacatttt tatgacctta gacaccaaaa ttcactattt accatatgat tactatatcg 901 ctttagattt gttactaggt ttcatcattt ttgcaatggt gtggacgaca caactacgga 961 caacgaccac aacaaaaata cacacaccga tgagacgagg acgacgacca cgacaacgga 1021 cttgtttggt accccaattg tcgctgaatg gttcaatgaa cgtagttgtt gttgttttga 1081 ctatgaatgt agttgttctt aaacaaattc atcaaaatct caactatcac caaattcact 1141 accacctacc gccaccacca ccaccaccac cacaaccaag aacaacaaca atacaccact 1201 gccatgaata tagtaactgc agttgttgta gtagctcaac ttcatcgttg atgaatgata 1261 tcatttcttc tactacctcc cccatcaaca acaacttgca acgattcgac tactacctct 1321 tcttcttcta ccgcagagtc gtcattgtta gcaccatcaa catctcttca gctaccgcta 1381 ctattactac tacttctagt actaaaaaaa acatcaaaac aatcaccaaa aaacaacaat 1441 tattgtattg cccaattcaa ggacaaattc agctaccaca gccagcatca tctttaattc 1501 gtcccccctt ggcagtagta catgaaatat taacaacact actaccacta ctattactac 1561 tactaccacc tccaaactta tcactaccac caccaactta accaccacca accactatct 1621 tatcaaatcg aatcaaatca aatcagcttg cttgatcaac aacaacaact agttctttaa 1681 attgttgttt gacttgaaca acagttcgat actgcaacgc agtttgttgt tactggccat 1741 gcccaaccat atgacttggt gttttgtctc taaacaatgc tcaagtctgc ggcgctaact 1801 actccaaatt cctacaaaca tcaccacttc acctaattgc cattagcttt gtcaaaaaaa 1861 aaaatattga ttgcatcact tcaccgccgt caacaaaatg cccccaattt cggaaaaaaa 1921 ataagcacaa catcactact acctcttcta cagaataaaa gacttgtgtg tcagcaaaga 1981 cagccatcag ccatgaattc gtcatgtcca aaataggttt gcaaacggaa aaatgtcaag 2041 ctaccatacg ccttccttgc tagacatatt gctgtatggg gtcgagctta gtttaaagtt 2101 gaatctcaat gttagccttt gatagcatat atgtaaaccc tgctgggaca cgcaaaggaa 2161 ttatggcaat taaggataac aattattttt ttgtcatcct aaaggactac ttagttttca 2221 acaccggggt tgcaaaggtt tccgcagtca gcagcatgga caatgttttt attagtatag 2281 gctatccacc gttattggat tggatatcta tttattatgt ttttttctcg ggcccagaat 2341 tcactcaata acgccggggg agctacgcca cgcctttttc tcttcaaatg ttgctgaatt 2401 caggaatagt taaaaagtcc ctcagcttta gagccaccga cagccaacga tacaacttga 2461 aaggtcttca aaaatgtaga agcaggtcat ccatccatca cacatccatc gtgttccttc 2521 gtcctgaagt caacaaatgg gtatagtatg agttatgtac attttgtaac ttctttgaaa 2581 aacataattt ttcgtttatc tactccttta tgcgaatgaa gagagaactt taactcgcta 2641 tacacactct ctctagctcc ttttctagaa atacaacagt agtagcaatt tttcaagttg 2701 tgtttttttt taagaaaaat tgatgatgtt tttaaatgat ctggcgataa ttcacaccta 2761 actctttttt tttatttttt gtgttttatt ctacttcaaa tgggtgaggt cttcttaaaa 2821 accacctgta acgtaactcc aatgagctat cagcaacatc acaaccctcc tactgctaac 2881 tactgctact tcgttgtaag tcggtctcgg tatcggtgtc tgtcgatcat gaatccatca 2941 tttttggggt cggcctttaa cacaacaaaa atggcaaatt aacaacgatg tgcttgacat 3001 tttaaacaat aatccggtaa acacgttaaa ggaatctgtt ttagaacctg cctgctacga 3061 gtgtcatcaa tgtatatccc cccatcccct ttgtctgcct tcagctgcta cataccacac 3121 caccccaaaa accgatattt caactttaga aatgattttt cagaaatgta atgcgccaca 3181 gcttgtaaat tttcagtcca ccaaacagca actaaggtcg ccataaaatt ttgtagaaac 3241 tttgcactac caagtaaacc aatgtacctt ccaaaacaaa caaacaacca actgctactt 3301 ctgtccgtcc aactgccaac aaaaatcctt caactataag ttatgggcgt accttgaaac 3361 gggtaaccac tgcgcgtcgt gttgtcatca tgtttatagt cctttttatt cgcaaagtat 3421 atagcaacaa aaatcatcac aaacctatca attgatcaac caaccaacca acaccaccaa 3481 ccaatcagcc aacaatcgtt tttcagtcaa ctgcaagcaa aaattcgtta gcaataatca 3541 gcatcattat tagccaaaat gtatactaca aacttctcac tgccacaagt attcgaaatc 3601 tcaacaacca ttttacaagt aaaacaacct cctccataca aaaaaaaaaa aa