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LOCUS XM_013255873 3756 bp mRNA linear INV 02-SEP-2023 (LOC106089883), transcript variant X1, mRNA. ACCESSION XM_013255873 VERSION XM_013255873.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013255873.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3756 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3756 /gene="LOC106089883" /note="RNA-binding protein 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins" /db_xref="GeneID:106089883" CDS 233..1705 /gene="LOC106089883" /codon_start=1 /product="integrator complex subunit 6 homolog isoform X1" /protein_id="XP_013111327.2" /db_xref="GeneID:106089883" /translation="MPRYREWDLACKVYVGNLGSSASKYEIENAFSKYGPLRNVWVAR NPPGFAFVEFEDRRDAEDATRALDGTRCCGTRIRVEMSSGRSRREGSRRRGGNSGGGG GRSAGESAGSGRGAVAGGSARYRKIKSTSASTTTTSTTICCTTSTSITTTNYSSSYYY KKSVNNFSFNNNNDYSNNLSSKKRNIFINTLPPPPPTATTTTTATATYFLIIKNNNCT RKIITITSNTNYTPILLLTDDIFMTLDTKIHYLPYDYYIALDLLLGFIIFAMVWTTQL RTTTTTKIHTPMRRGRRPRQRTCLVPQLSLNGSMNVVVVVLTMNVVVLKQIHQNLNYH QIHYHLPPPPPPPPQPRTTTIHHCHEYSNCSCCSSSTSSLMNDIISSTTSPINNNLQR FDYYLFFFYRRVVIVSTINISSATATITTTSSTKKNIKTITKKQQLLYCPIQGQIQLP QPASSLIRPPLAVVHEILTTLLPLLLLLLPPPNLSLPPPT" polyA_site 3756 /gene="LOC106089883" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tctcagtatt ttttcggctc ttcaacgaca aaacgcttta ttcgtgaacc atcatcagct 61 cgtaactctt caaatttttg acaaagtgtc gcaagaaata aatgccgttc tgttattaac 121 caaccaacta gtgaaaaagt taaagcaaaa agtaatttca tagaagttta agcagacaaa 181 taattaaata aaaaggaaaa aattcacaaa cctaggctaa aaacaaacaa atatgccacg 241 ctatcgtgaa tgggatttgg cctgcaaagt ctatgtgggc aatttgggat catcagcgtc 301 aaaatatgaa attgaaaacg catttagcaa atacggccca ctgcgtaatg tctgggttgc 361 acgcaaccct cctggttttg cttttgttga attcgaagac agacgtgatg ccgaagacgc 421 aacccgagcc ctagatggaa ctcgttgctg tggtacccgc atacgtgtag aaatgtcctc 481 tggacgttca cgcagagaag gaagcagacg ccgtggcggt aacagtggtg gcggaggagg 541 ccgcagcgct ggcgaatctg ctggcagtgg ccgtggagca gtagcgggcg gaagtgcacg 601 ctaccggaaa ataaagtcaa cttctgcttc aactactact acctccacta ctatttgttg 661 taccacaagt acatctatta ctactaccaa ctactcctct tcctactact acaaaaaatc 721 agtcaacaac ttcagcttca acaacaacaa cgactacagc aacaacctca gctcgaaaaa 781 aagaaacatt ttcatcaaca cactacctcc accaccaccg acagcaacaa caacaacaac 841 agctacagca acatatttcc tcatcattaa gaataataat tgtacaagaa aaatcatcac 901 aatcacttct aacaccaact atacaccaat actcctcctg accgacgaca tttttatgac 961 cttagacacc aaaattcact atttaccata tgattactat atcgctttag atttgttact 1021 aggtttcatc atttttgcaa tggtgtggac gacacaacta cggacaacga ccacaacaaa 1081 aatacacaca ccgatgagac gaggacgacg accacgacaa cggacttgtt tggtacccca 1141 attgtcgctg aatggttcaa tgaacgtagt tgttgttgtt ttgactatga atgtagttgt 1201 tcttaaacaa attcatcaaa atctcaacta tcaccaaatt cactaccacc taccgccacc 1261 accaccacca ccaccacaac caagaacaac aacaatacac cactgccatg aatatagtaa 1321 ctgcagttgt tgtagtagct caacttcatc gttgatgaat gatatcattt cttctactac 1381 ctcccccatc aacaacaact tgcaacgatt cgactactac ctcttcttct tctaccgcag 1441 agtcgtcatt gttagcacca tcaacatctc ttcagctacc gctactatta ctactacttc 1501 tagtactaaa aaaaacatca aaacaatcac caaaaaacaa caattattgt attgcccaat 1561 tcaaggacaa attcagctac cacagccagc atcatcttta attcgtcccc ccttggcagt 1621 agtacatgaa atattaacaa cactactacc actactatta ctactactac cacctccaaa 1681 cttatcacta ccaccaccaa cttaaccacc accaaccact atcttatcaa atcgaatcaa 1741 atcaaatcag cttgcttgat caacaacaac aactagttct ttaaattgtt gtttgacttg 1801 aacaacagtt cgatactgca acgcagtttg ttgttactgg ccatgcccaa ccatatgact 1861 tggtgttttg tctctaaaca atgctcaagt ctgcggcgct aactactcca aattcctaca 1921 aacatcacca cttcacctaa ttgccattag ctttgtcaaa aaaaaaaata ttgattgcat 1981 cacttcaccg ccgtcaacaa aatgccccca atttcggaaa aaaaataagc acaacatcac 2041 tactacctct tctacagaat aaaagacttg tgtgtcagca aagacagcca tcagccatga 2101 attcgtcatg tccaaaatag gtttgcaaac ggaaaaatgt caagctacca tacgccttcc 2161 ttgctagaca tattgctgta tggggtcgag cttagtttaa agttgaatct caatgttagc 2221 ctttgatagc atatatgtaa accctgctgg gacacgcaaa ggaattatgg caattaagga 2281 taacaattat ttttttgtca tcctaaagga ctacttagtt ttcaacaccg gggttgcaaa 2341 ggtttccgca gtcagcagca tggacaatgt ttttattagt ataggctatc caccgttatt 2401 ggattggata tctatttatt atgttttttt ctcgggccca gaattcactc aataacgccg 2461 ggggagctac gccacgcctt tttctcttca aatgttgctg aattcaggaa tagttaaaaa 2521 gtccctcagc tttagagcca ccgacagcca acgatacaac ttgaaaggtc ttcaaaaatg 2581 tagaagcagg tcatccatcc atcacacatc catcgtgttc cttcgtcctg aagtcaacaa 2641 atgggtatag tatgagttat gtacattttg taacttcttt gaaaaacata atttttcgtt 2701 tatctactcc tttatgcgaa tgaagagaga actttaactc gctatacaca ctctctctag 2761 ctccttttct agaaatacaa cagtagtagc aatttttcaa gttgtgtttt tttttaagaa 2821 aaattgatga tgtttttaaa tgatctggcg ataattcaca cctaactctt tttttttatt 2881 ttttgtgttt tattctactt caaatgggtg aggtcttctt aaaaaccacc tgtaacgtaa 2941 ctccaatgag ctatcagcaa catcacaacc ctcctactgc taactactgc tacttcgttg 3001 taagtcggtc tcggtatcgg tgtctgtcga tcatgaatcc atcatttttg gggtcggcct 3061 ttaacacaac aaaaatggca aattaacaac gatgtgcttg acattttaaa caataatccg 3121 gtaaacacgt taaaggaatc tgttttagaa cctgcctgct acgagtgtca tcaatgtata 3181 tccccccatc ccctttgtct gccttcagct gctacatacc acaccacccc aaaaaccgat 3241 atttcaactt tagaaatgat ttttcagaaa tgtaatgcgc cacagcttgt aaattttcag 3301 tccaccaaac agcaactaag gtcgccataa aattttgtag aaactttgca ctaccaagta 3361 aaccaatgta ccttccaaaa caaacaaaca accaactgct acttctgtcc gtccaactgc 3421 caacaaaaat ccttcaacta taagttatgg gcgtaccttg aaacgggtaa ccactgcgcg 3481 tcgtgttgtc atcatgttta tagtcctttt tattcgcaaa gtatatagca acaaaaatca 3541 tcacaaacct atcaattgat caaccaacca accaacacca ccaaccaatc agccaacaat 3601 cgtttttcag tcaactgcaa gcaaaaattc gttagcaata atcagcatca ttattagcca 3661 aaatgtatac tacaaacttc tcactgccac aagtattcga aatctcaaca accattttac 3721 aagtaaaaca acctcctcca tacaaaaaaa aaaaaa