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LOCUS XM_013255575 4486 bp mRNA linear INV 02-SEP-2023 (LOC106089652), transcript variant X1, mRNA. ACCESSION XM_013255575 VERSION XM_013255575.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013255575.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4486 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4486 /gene="LOC106089652" /note="integrator complex subunit 6; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins" /db_xref="GeneID:106089652" CDS 630..4061 /gene="LOC106089652" /codon_start=1 /product="integrator complex subunit 6" /protein_id="XP_013111029.2" /db_xref="GeneID:106089652" /translation="MTIILFLVDTSSSMCQKAYVNGVQKTYLDIAKGAVETFLKYRQR TQDCLGDRYMLLTFEEPPANVKAGWKENHATFMNELKNLQSTGLTSMGESLKNAFDLL NLNRMQSGIDTYGQGRCPFYLEPSVIIVITDGGRYSNRNVVHQDIILPLNTQIPGTKF TKEPFRWDQRLFSLVLRMSGNRMDERVEGKVPHDDSPIERMCEVTGGRSYRVRSHYVL NQCIESLVQKVQPGVVLQFEPLIPKDPNNMTNEALQDLIFQPLKKMIYVQKHISQKTF PIGYWPLPEPYWPDPKAPTLPPRDAHPKLKIVTPAVEEPQTVHNFPVDKYEIEASPLT LQILQKREMKKCWQVIISNGMHGFELPFGYLKASSTTSQVHLYVLAYNYPALLPLLHD LIHKYNMSPPNDLMYKFNAYVRSIPPYYCPFLRKALLNISVPYPLLQFLLPDNVDNYL SPNIANQLKHIKNTAKQDQENLCMKVYKQLKQPKPPYRQVETAKLNTGVPLRRDLVRH PLLRDTFAKLHSEIEPLENYTVVVPQLTRQQSAKSYRNPFDIPRRDIIEEIARMREAF MRPQPASLVAKDSGHCLPIAEMGNYQEYLKNKDNPLREIEPTNVRQHMFGNPYKKDKH MVMVDEADLSDVAPMKGGNGAGPSGGPGVSGIGGPPGGKKLDSSRARKRKAGPIRMDF VFRRTSTDSRPRTPTPSISSSSISSSTSSVSSLSDLESIDSDSDTSSISSGMSDDGDP DRLVVAFPDFTDEEATETEFTFNGYVVDFINGVGVENSCDNPSNDVLSPTVSNLNASG LTSNLPMVNGQITPPMSPHHPLMQPPPHQSPAPTTNPYMTNYASLGPHEPSTPPPPTL LGPPTHLAINAMLHGTASPLNGNIYSTPSNLPIASNGGPLIVNNAGTSVSAAPTSPVT NPYQHQSPAPLQQLTSVVHHAALTPPSPSQPAHHLHDINDAQEISRILQQCHNGSINS SVTSSSSSSATTTISSETTNAADCASKSDPETALMPPPSMPLGSSSFDSLKRESGNTS TTTTITSLTFSNHVNHSSSAPATAAPTPLTDEQREQARKHNMDLRAQVFRDIRKPGRN YSQLLEHLNLIKGDADMKSNFIQMCISESLRFRRKQMVNSIQEWWDKKQQVQATS" polyA_site 4486 /gene="LOC106089652" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gcgaggttgg atggaggttt caacggaaaa agtgattaaa agttaaagtg aacaataagt 61 gatttgattt tgaaaaaaat acaagagaga agagaagtgt ttaataagca agcaagcaac 121 aacgacgttg gcggagcccg cagcagaata aacacaattt caactcggga acaaaaacaa 181 aaagagaaaa ttttgcgttc tcggtgcgct actctccgat tagtgataaa aatatttgtt 241 atgaatttca atttattttt atatttgaga aaagaaatgt tttccaaacg gcgaaatgag 301 aaaaaaatga aaggggcgtt gtaaacaacg ctctctttat cgttaaaact actttggaat 361 tactatgcga taaaacaaaa aacggaatac agtaaaaagt cattcctttt ttaaagttcg 421 ttgattttct gacacacaaa aatcatagac tgaaattgta aggagcagac aaggataagg 481 caaaacgtag tgctacgagc tacgacgctt aaatacatac aaatatacaa aaagaaaaga 541 tttatagaaa aaagtgcgag tgcggctctt aagtgcatgt gtttctaggg gaaaactacg 601 gaaaactcat tgctgttgaa aagtgaaaaa tgacaattat acttttcttg gtcgacactt 661 cgtcgtctat gtgccaaaaa gcctacgtta atggcgtcca aaaaacctac ttggatatcg 721 ccaagggagc cgtggaaact tttctcaaat atcgtcagcg cacacaagac tgtctgggtg 781 atcgttacat gctgctgaca tttgaggagc cgcctgccaa tgtaaaggcc ggctggaagg 841 agaatcatgc cacattcatg aatgaactga agaatctaca aagtacgggt cttacatcga 901 tgggggaatc cctgaaaaac gcctttgatt tgttaaattt gaatcgtatg caatctggta 961 ttgatacata tggccagggt aggtgcccct tttacttgga gccctctgtg ataatagtca 1021 taacggatgg tggccgttat tccaatcgta atgtggtgca ccaggacatt attttacccc 1081 ttaacaccca aataccggga acaaagttca ccaaggaacc ctttcgctgg gaccaacgtt 1141 tgttttcttt agtgctgcgc atgtctggca atagaatgga tgaacgggtg gaaggaaagg 1201 tgccccatga tgattcgccc attgagagga tgtgtgaggt aaccggcggg cgttcatatc 1261 gtgtgagatc tcactatgtg ctcaaccaat gtattgaaag cttagtgcaa aaagtacaac 1321 ctggtgtggt gttacagttc gaacccctaa ttcctaaaga tccaaataat atgacaaacg 1381 aagcactaca agatttaatt tttcagccat tgaaaaaaat gatctatgta caaaagcata 1441 ttagccaaaa aaccttcccc ataggctatt ggcctctgcc cgaaccatat tggccagatc 1501 ccaaggcacc gactctgcca ccccgtgatg ctcatcccaa gttgaaaata gtaacaccgg 1561 ccgtggagga gcctcagaca gtgcataact ttcctgtgga caagtatgag atagaagcca 1621 gccccctgac cttgcagatt ctgcagaaac gtgaaatgaa gaaatgttgg caagtcatta 1681 tctcgaatgg catgcatggc tttgaattgc catttgggta tctcaaggcc tcatccacta 1741 catcacaggt gcatctttat gtcttggcct ataattatcc ggccctctta ccattgctgc 1801 acgatttaat tcacaaatac aatatgagcc caccaaatga tttaatgtac aaatttaatg 1861 cgtacgttcg atccattcct ccctactatt gtccattctt gcggaaggca ttacttaaca 1921 tctctgtgcc ttatcccctg ctgcagttcc tgttaccgga caatgtggat aattatctct 1981 caccaaatat agcaaatcaa ttgaagcata taaagaacac agccaaacaa gatcaagaga 2041 acctatgcat gaaggtatac aagcaattga agcagccgaa accgccctat cgtcaggtgg 2101 aaacggccaa gttaaatact ggtgtgccac tgcgcaggga tctggtgcgc catccattgc 2161 tgcgtgacac ttttgccaaa cttcactcag aaatcgagcc gctagaaaac tacactgtag 2221 tcgtgcccca attgacgcga caacaatcgg ccaaatcata tcgcaacccc ttcgatatac 2281 caagaaggga tatcattgag gaaatcgccc gaatgcgtga ggcctttatg agacctcaac 2341 ccgccagtct agtggccaaa gattctggtc actgtttgcc tatagctgaa atgggcaatt 2401 accaggagta tttgaagaat aaagataatc ccttgcgcga aattgaaccg acaaatgtac 2461 ggcaacatat gtttggcaat ccctataaga aggataagca tatggttatg gttgatgaag 2521 ctgatttgag tgatgtggcg cccatgaaag gtggaaatgg cgcaggtcct tctggggggc 2581 ctggtgttag tggcataggt ggtcctccgg gcggcaagaa gctagactct tcgagagccc 2641 gaaaacgtaa ggctggtccc atacgcatgg attttgtttt taggcgcaca tcgacagact 2701 caaggccacg cacccccact ccttcgatat catcgtctag tatttcttcg agcacatctt 2761 cagtatcttc cctctccgat ttagagtcca tagactcgga ttcggatacc tcttcgatat 2821 cttcgggcat gtctgatgat ggagatcctg atcgtttggt tgttgcattt cccgatttca 2881 ccgacgagga ggccacagaa accgaattca cattcaacgg ttacgtggtt gatttcatta 2941 atggtgtggg agttgaaaat agctgtgata atcctagtaa cgatgtcttg agcccaacgg 3001 tctcgaatct taatgccagc ggactaactt caaatttgcc catggtcaat gggcaaataa 3061 caccgccaat gagtccacat catccattga tgcagccgcc gccacatcag tcacctgctc 3121 ccacaaccaa tccctatatg acgaattacg catctttggg accacatgaa cctagtacac 3181 ctccacctcc gacactatta ggcccgccaa cgcacttagc tatcaatgca atgcttcatg 3241 gcactgcctc gcccctaaat ggtaatattt acagtacacc cagtaatctg ccaatcgcta 3301 gtaatggtgg gccattaata gtgaataatg cgggaacatc agtatcagca gcacctacaa 3361 gtccagttac aaatccatat caacaccaaa gcccagcgcc gctacaacag ttgacatccg 3421 tggtccacca tgctgcacta acaccgccat ccccatccca gcctgctcat cacttacacg 3481 acatcaacga tgctcaagaa atttccagaa tattacaaca atgccacaat ggcagcatta 3541 actcttcggt gacatcgtcg tcctcatcat cggctaccac aacaatctca tccgagacca 3601 cgaacgccgc agattgtgcc tccaaatccg atcctgagac ggcgcttatg cctccgccct 3661 caatgccttt gggctcaagt agcttcgatt cccttaaaag ggaaagtggc aacaccagca 3721 ccacaactac cataacttca ctaacattct caaatcatgt caatcattct tcgtcagcac 3781 ctgcgacggc ggcgcccact ccgctaaccg atgagcaaag agaacaagca cgtaaacaca 3841 atatggattt gagggcgcaa gtatttcgcg atattcgtaa accgggacgc aactattccc 3901 aactacttga acatttgaat ctaatcaaag gcgatgcgga tatgaaatca aatttcatac 3961 aaatgtgcat ttcggaatcg ctgcgattcc gacgcaagca aatggtcaat agcatacagg 4021 agtggtggga taaaaaacaa caagtacagg caactagtta acaattactg taatactaga 4081 tagcgaagat ttataattaa aaaaaaaaat gaatactgaa acaaaggacc atgtcgtcaa 4141 attggaatca aacgaatcat tatttcttct attgttttta gtgtgttctt ttcattcgga 4201 gttttctgtt tcatcttcta gttttatgag gcccctactc tgtaaaggcc caccatcttg 4261 caaaggagca agggtctgat ttagttggaa atatgtattg taaataattg caggcctgta 4321 gtttcttgga atacccatac atacacattg agagcagggg aatagtatta atacggcttc 4381 aaagcaatgt atgcgagagt agtttttaat tttgttattt ctttactgat cactatttag 4441 tttttcttct tcttcttttc aataaagagt taatcaaaga accata