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LOCUS XM_013255574 4755 bp mRNA linear INV 02-SEP-2023 (LOC106089652), transcript variant X2, mRNA. ACCESSION XM_013255574 VERSION XM_013255574.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013255574.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4755 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4755 /gene="LOC106089652" /note="integrator complex subunit 6; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins" /db_xref="GeneID:106089652" CDS 899..4330 /gene="LOC106089652" /codon_start=1 /product="integrator complex subunit 6" /protein_id="XP_013111028.2" /db_xref="GeneID:106089652" /translation="MTIILFLVDTSSSMCQKAYVNGVQKTYLDIAKGAVETFLKYRQR TQDCLGDRYMLLTFEEPPANVKAGWKENHATFMNELKNLQSTGLTSMGESLKNAFDLL NLNRMQSGIDTYGQGRCPFYLEPSVIIVITDGGRYSNRNVVHQDIILPLNTQIPGTKF TKEPFRWDQRLFSLVLRMSGNRMDERVEGKVPHDDSPIERMCEVTGGRSYRVRSHYVL NQCIESLVQKVQPGVVLQFEPLIPKDPNNMTNEALQDLIFQPLKKMIYVQKHISQKTF PIGYWPLPEPYWPDPKAPTLPPRDAHPKLKIVTPAVEEPQTVHNFPVDKYEIEASPLT LQILQKREMKKCWQVIISNGMHGFELPFGYLKASSTTSQVHLYVLAYNYPALLPLLHD LIHKYNMSPPNDLMYKFNAYVRSIPPYYCPFLRKALLNISVPYPLLQFLLPDNVDNYL SPNIANQLKHIKNTAKQDQENLCMKVYKQLKQPKPPYRQVETAKLNTGVPLRRDLVRH PLLRDTFAKLHSEIEPLENYTVVVPQLTRQQSAKSYRNPFDIPRRDIIEEIARMREAF MRPQPASLVAKDSGHCLPIAEMGNYQEYLKNKDNPLREIEPTNVRQHMFGNPYKKDKH MVMVDEADLSDVAPMKGGNGAGPSGGPGVSGIGGPPGGKKLDSSRARKRKAGPIRMDF VFRRTSTDSRPRTPTPSISSSSISSSTSSVSSLSDLESIDSDSDTSSISSGMSDDGDP DRLVVAFPDFTDEEATETEFTFNGYVVDFINGVGVENSCDNPSNDVLSPTVSNLNASG LTSNLPMVNGQITPPMSPHHPLMQPPPHQSPAPTTNPYMTNYASLGPHEPSTPPPPTL LGPPTHLAINAMLHGTASPLNGNIYSTPSNLPIASNGGPLIVNNAGTSVSAAPTSPVT NPYQHQSPAPLQQLTSVVHHAALTPPSPSQPAHHLHDINDAQEISRILQQCHNGSINS SVTSSSSSSATTTISSETTNAADCASKSDPETALMPPPSMPLGSSSFDSLKRESGNTS TTTTITSLTFSNHVNHSSSAPATAAPTPLTDEQREQARKHNMDLRAQVFRDIRKPGRN YSQLLEHLNLIKGDADMKSNFIQMCISESLRFRRKQMVNSIQEWWDKKQQVQATS" polyA_site 4755 /gene="LOC106089652" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 agaaaaaaaa aacaatttat acaattcttt tttttttatt tttttacacc attctgtgag 61 cgtatgagca aaagagtata ttcgacgacg tcgtgatatt ggttgttact tgtatttgtt 121 gttgtataga cttacttttg gtgagctggt tggttcgtcc gtcgatttat tttggatgac 181 gatacgaagt gatggtgatg atggtgcgaa gaagaatgag cttcattgag tgtgtgtgtg 241 tgttatgtgc ttgctatttg gttttgtgag taaaaatgtg ttgaattact aaaccaacag 301 caacaacaac agcattgagt acattcatgt ggagcattgc attattatga gaaatattca 361 atttaaagaa aataaaaaag cacaccaaag agaatgacaa caacgaagac gaccgcaaga 421 atacagagca agcaaaccaa gaacccaaac acaatcaaat ttgttagctt cagcggcttt 481 ggatcttaag tgtatcttac ccccgctcga tgaatttcaa tttattttta tatttgagaa 541 aagaaatgtt ttccaaacgg cgaaatgaga aaaaaatgaa aggggcgttg taaacaacgc 601 tctctttatc gttaaaacta ctttggaatt actatgcgat aaaacaaaaa acggaataca 661 gtaaaaagtc attccttttt taaagttcgt tgattttctg acacacaaaa atcatagact 721 gaaattgtaa ggagcagaca aggataaggc aaaacgtagt gctacgagct acgacgctta 781 aatacataca aatatacaaa aagaaaagat ttatagaaaa aagtgcgagt gcggctctta 841 agtgcatgtg tttctagggg aaaactacgg aaaactcatt gctgttgaaa agtgaaaaat 901 gacaattata cttttcttgg tcgacacttc gtcgtctatg tgccaaaaag cctacgttaa 961 tggcgtccaa aaaacctact tggatatcgc caagggagcc gtggaaactt ttctcaaata 1021 tcgtcagcgc acacaagact gtctgggtga tcgttacatg ctgctgacat ttgaggagcc 1081 gcctgccaat gtaaaggccg gctggaagga gaatcatgcc acattcatga atgaactgaa 1141 gaatctacaa agtacgggtc ttacatcgat gggggaatcc ctgaaaaacg cctttgattt 1201 gttaaatttg aatcgtatgc aatctggtat tgatacatat ggccagggta ggtgcccctt 1261 ttacttggag ccctctgtga taatagtcat aacggatggt ggccgttatt ccaatcgtaa 1321 tgtggtgcac caggacatta ttttacccct taacacccaa ataccgggaa caaagttcac 1381 caaggaaccc tttcgctggg accaacgttt gttttcttta gtgctgcgca tgtctggcaa 1441 tagaatggat gaacgggtgg aaggaaaggt gccccatgat gattcgccca ttgagaggat 1501 gtgtgaggta accggcgggc gttcatatcg tgtgagatct cactatgtgc tcaaccaatg 1561 tattgaaagc ttagtgcaaa aagtacaacc tggtgtggtg ttacagttcg aacccctaat 1621 tcctaaagat ccaaataata tgacaaacga agcactacaa gatttaattt ttcagccatt 1681 gaaaaaaatg atctatgtac aaaagcatat tagccaaaaa accttcccca taggctattg 1741 gcctctgccc gaaccatatt ggccagatcc caaggcaccg actctgccac cccgtgatgc 1801 tcatcccaag ttgaaaatag taacaccggc cgtggaggag cctcagacag tgcataactt 1861 tcctgtggac aagtatgaga tagaagccag ccccctgacc ttgcagattc tgcagaaacg 1921 tgaaatgaag aaatgttggc aagtcattat ctcgaatggc atgcatggct ttgaattgcc 1981 atttgggtat ctcaaggcct catccactac atcacaggtg catctttatg tcttggccta 2041 taattatccg gccctcttac cattgctgca cgatttaatt cacaaataca atatgagccc 2101 accaaatgat ttaatgtaca aatttaatgc gtacgttcga tccattcctc cctactattg 2161 tccattcttg cggaaggcat tacttaacat ctctgtgcct tatcccctgc tgcagttcct 2221 gttaccggac aatgtggata attatctctc accaaatata gcaaatcaat tgaagcatat 2281 aaagaacaca gccaaacaag atcaagagaa cctatgcatg aaggtataca agcaattgaa 2341 gcagccgaaa ccgccctatc gtcaggtgga aacggccaag ttaaatactg gtgtgccact 2401 gcgcagggat ctggtgcgcc atccattgct gcgtgacact tttgccaaac ttcactcaga 2461 aatcgagccg ctagaaaact acactgtagt cgtgccccaa ttgacgcgac aacaatcggc 2521 caaatcatat cgcaacccct tcgatatacc aagaagggat atcattgagg aaatcgcccg 2581 aatgcgtgag gcctttatga gacctcaacc cgccagtcta gtggccaaag attctggtca 2641 ctgtttgcct atagctgaaa tgggcaatta ccaggagtat ttgaagaata aagataatcc 2701 cttgcgcgaa attgaaccga caaatgtacg gcaacatatg tttggcaatc cctataagaa 2761 ggataagcat atggttatgg ttgatgaagc tgatttgagt gatgtggcgc ccatgaaagg 2821 tggaaatggc gcaggtcctt ctggggggcc tggtgttagt ggcataggtg gtcctccggg 2881 cggcaagaag ctagactctt cgagagcccg aaaacgtaag gctggtccca tacgcatgga 2941 ttttgttttt aggcgcacat cgacagactc aaggccacgc acccccactc cttcgatatc 3001 atcgtctagt atttcttcga gcacatcttc agtatcttcc ctctccgatt tagagtccat 3061 agactcggat tcggatacct cttcgatatc ttcgggcatg tctgatgatg gagatcctga 3121 tcgtttggtt gttgcatttc ccgatttcac cgacgaggag gccacagaaa ccgaattcac 3181 attcaacggt tacgtggttg atttcattaa tggtgtggga gttgaaaata gctgtgataa 3241 tcctagtaac gatgtcttga gcccaacggt ctcgaatctt aatgccagcg gactaacttc 3301 aaatttgccc atggtcaatg ggcaaataac accgccaatg agtccacatc atccattgat 3361 gcagccgccg ccacatcagt cacctgctcc cacaaccaat ccctatatga cgaattacgc 3421 atctttggga ccacatgaac ctagtacacc tccacctccg acactattag gcccgccaac 3481 gcacttagct atcaatgcaa tgcttcatgg cactgcctcg cccctaaatg gtaatattta 3541 cagtacaccc agtaatctgc caatcgctag taatggtggg ccattaatag tgaataatgc 3601 gggaacatca gtatcagcag cacctacaag tccagttaca aatccatatc aacaccaaag 3661 cccagcgccg ctacaacagt tgacatccgt ggtccaccat gctgcactaa caccgccatc 3721 cccatcccag cctgctcatc acttacacga catcaacgat gctcaagaaa tttccagaat 3781 attacaacaa tgccacaatg gcagcattaa ctcttcggtg acatcgtcgt cctcatcatc 3841 ggctaccaca acaatctcat ccgagaccac gaacgccgca gattgtgcct ccaaatccga 3901 tcctgagacg gcgcttatgc ctccgccctc aatgcctttg ggctcaagta gcttcgattc 3961 ccttaaaagg gaaagtggca acaccagcac cacaactacc ataacttcac taacattctc 4021 aaatcatgtc aatcattctt cgtcagcacc tgcgacggcg gcgcccactc cgctaaccga 4081 tgagcaaaga gaacaagcac gtaaacacaa tatggatttg agggcgcaag tatttcgcga 4141 tattcgtaaa ccgggacgca actattccca actacttgaa catttgaatc taatcaaagg 4201 cgatgcggat atgaaatcaa atttcataca aatgtgcatt tcggaatcgc tgcgattccg 4261 acgcaagcaa atggtcaata gcatacagga gtggtgggat aaaaaacaac aagtacaggc 4321 aactagttaa caattactgt aatactagat agcgaagatt tataattaaa aaaaaaaatg 4381 aatactgaaa caaaggacca tgtcgtcaaa ttggaatcaa acgaatcatt atttcttcta 4441 ttgtttttag tgtgttcttt tcattcggag ttttctgttt catcttctag ttttatgagg 4501 cccctactct gtaaaggccc accatcttgc aaaggagcaa gggtctgatt tagttggaaa 4561 tatgtattgt aaataattgc aggcctgtag tttcttggaa tacccataca tacacattga 4621 gagcagggga atagtattaa tacggcttca aagcaatgta tgcgagagta gtttttaatt 4681 ttgttatttc tttactgatc actatttagt ttttcttctt cttcttttca ataaagagtt 4741 aatcaaagaa ccata