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LOCUS XM_013254819 3912 bp mRNA linear INV 02-SEP-2023 domain (LOC106089061), transcript variant X3, mRNA. ACCESSION XM_013254819 VERSION XM_013254819.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013254819.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3912 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3912 /gene="LOC106089061" /note="NCK-interacting protein with SH3 domain; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:106089061" CDS 1010..3322 /gene="LOC106089061" /codon_start=1 /product="NCK-interacting protein with SH3 domain isoform X2" /protein_id="XP_013110273.2" /db_xref="GeneID:106089061" /translation="MGDNIEMLKALYDFQAVYPKTISFDEGEYFILYQTSARQRNWWQ VVSMKGNIGFVPSNYVMKIKVEPDFLISFLNSSIESLELSKEAEINGIMPKDELLDRL REKKISMEKMYLDNSERDGDSSLSFSQSIGDGKHSAPHSQEHRPHSPPHSKRLDSSKK SISSPSMATALPLMISESPSMGSMQVQTQQGQQQQQAQLPSPAQSKVNDVAQDNSVTS EHSETTTTTTTTSEDVVTTYKEPSLNDSSASYTHSKENGTLKSENKDSSSKDRKSKEK SSKLDNHVKTQNGIDEKEDKTGNDRSEGSDGPASEERNVNGTATKGDSNDNSQNLDSE DSGAAMQQLHAAAAAAALAHTGGYPRPNLKVESSDVYQIVDVIRRNTNLSFDLSCEAL RVVLTSLEQLYNGAINPYLEAVAIHVTEKVETPKGLLGVTHDSKKLQYIFSQLADCKN DSEQRTWMLYEDEEDIAQFLEDLVDILNNADETICCYEMSCDQYQALVNLVQYYQMET RWNIKRLLLRTFTAACHLDHIIVDILLTSVLPLEIVEDMKTNFSNLDRFKQLVKMLTI IFSLGQPMPVNHQDYLGVHFASFLLEIIEGNNPEVLVDMVISLVLAFNLQFNESTQNV IVEAMQTLPSAKVFTEKILLLLNREEDPVKVLKHTTDCMNSVLKMFIDIFSVSETAAM FYTNDTKVLIDIIVRQLTDLCAGNSLRRCYLELCRRILRNTDYQEHQHRKQDFMKIFT RIFCEETECSASDQKLVREIANEFPQIFKA" polyA_site 3912 /gene="LOC106089061" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttgtttctaa tcagtctgca aatgtcgatg gtgtgggaaa acatatgatt ttagcttcgt 61 gattctcaaa ttggcttctt atttgacata ttcccaaaag gaaatcgcaa cgaccagcat 121 tcaactctac atggaaacat acatacatac atacacaagt actagcataa gccgaacgcc 181 attagctagc caatagcaaa agttcatcct gaatttattt tagtcatcat ctctctaaac 241 aaggaagtgc gcgaagtgtg taaacgaacg gtcgccgatg cttcaagaag aaaaaccaag 301 tgcttaagag atgctgcttt gcagaataaa gtaaatacat aaatcaaaag gcaaaaatgt 361 gcaaaattaa ttaaaatcaa aaagtgtttt ttttcgtttt catcgcatcg caacttggag 421 tgctgcattt acatataaat agcaccggaa tttgctttaa aaatagcaca cacacaagct 481 aacataaagt agcagagtga tcgaaaagta attgaaaagc gcaatacgct aatccgcagc 541 taataagata tttgctttat tgtcgcccca gcgcatattg ctttgttttt ttaaataatg 601 tggaaaaaat agattggcct ccgccctgaa aaaagtgatt ttcgagtaca tacatatgca 661 cacacatata tataaatgaa tatacatata tcgaaaaatc caggaaaagg agggaatatt 721 gtgtttcatt tcgtttttat gctcgtttcc aaagaaattg gccaaaataa atacccggat 781 aaagcggagt gtataaaaag tgtgagcgaa gagtgcaaac aaaataaaaa agtaataaaa 841 cgcggataga caaacaaaaa caaaaaataa tagcagtaac aataacaata aaaaaagaac 901 ctaccaaacg actaacaccg accgagtgta tttaattaag agtacacata taacgtcata 961 gtttcgtcaa attgttttgt tcatcaagtt cgttgctgga atcatcatca tgggcgataa 1021 catcgaaatg cttaaagctt tgtatgattt tcaagccgtc tatcccaaaa cgattagttt 1081 cgatgagggt gaatacttca ttttgtatca gacttcggca cgccaaagga attggtggca 1141 ggtggtcagc atgaagggca acataggatt tgtgccttcc aattacgtaa tgaaaataaa 1201 ggttgaacct gatttcctga taagcttcct aaactcttcc attgagtcat tggagctttc 1261 caaagaggct gaaataaatg gcattatgcc caaagatgaa ctgctggata ggctgaggga 1321 aaagaaaatt tccatggaga aaatgtattt ggataattct gaaagagatg gcgactcatc 1381 actctccttc tcacagagca ttggtgatgg caaacacagt gctcctcatt cacaagaaca 1441 tcgaccccac agtccaccgc attcgaaacg tttggatagc agtaagaaat caatatcaag 1501 tccttccatg gccaccgcat tgcctcttat gatttccgaa tcacccagca tgggttccat 1561 gcaagttcaa acgcaacaag gccaacaaca gcagcaggca cagttaccct caccggccca 1621 gagtaaagtc aatgatgtgg cccaagacaa cagtgtaacc tctgaacatt ctgagaccac 1681 caccaccaca acaactacca gtgaagatgt ggtgaccacc tataaagagc ccagtctaaa 1741 tgattcatca gcttcctata cacattctaa agagaatggt accctaaaga gcgaaaataa 1801 ggattcctcc tccaaagatc gaaaatccaa ggagaaatcc agtaaattag ataatcatgt 1861 taaaacgcaa aatggtattg atgaaaaaga ggacaagact ggtaacgatc gatctgaggg 1921 tagtgatgga cctgccagcg aggagagaaa tgtcaatggc actgccacaa agggtgacag 1981 caatgataac agtcaaaacc ttgatagtga ggatagtggt gcggccatgc aacaattgca 2041 tgcagcagct gcggctgcag ccttggccca tactggcggt tatcccagac ccaatttgaa 2101 ggtagagtcg tcagatgtct atcaaattgt tgatgtcata agacgtaaca ccaatctgag 2161 ttttgatttg tcctgcgaag ccttgcgagt ggtactcacc agtttagagc agctttataa 2221 tggtgcaatc aatccttatc tggaggcggt ggccatacac gtaaccgaaa aagtggaaac 2281 ccccaaagga ttgctgggtg tcacacacga ttcaaagaaa ctgcagtaca tattctctca 2341 attggccgat tgtaaaaatg actcggaaca gcgtacatgg atgttgtatg aggatgaaga 2401 agatattgct caatttttgg aggatttggt cgatatattg aataatgccg atgaaactat 2461 ttgctgctat gaaatgtcct gtgatcaata tcaggcccta gtcaatttgg tgcagtacta 2521 tcaaatggaa acacgttgga atataaaacg tctgttgctc agaacattca cagctgcctg 2581 tcatttggat cacattattg ttgatatact gttgacctca gtattgcctt tggaaattgt 2641 ggaagatatg aaaacgaatt tttcaaattt agatcgtttt aagcaattag tcaaaatgtt 2701 aacaattata ttctcactgg gccaacctat gcctgtaaat caccaagatt atctgggtgt 2761 acattttgcc tccttcctac tggaaataat cgaaggcaat aatcctgaag ttctagtcga 2821 tatggttata tctttagttt tagcctttaa tctacaattt aatgagagca cacaaaatgt 2881 catagttgaa gctatgcaaa ccttaccctc agccaaagtg tttacagaga aaatcctttt 2941 acttctgaat cgggaggaag atcctgttaa agttttaaaa cacaccacag attgtatgaa 3001 ttcagttttg aaaatgttca ttgatatctt cagtgtatcg gaaacagcgg caatgttcta 3061 taccaatgat accaaagttt taatagacat cattgtaaga caactgactg atttatgtgc 3121 tggaaattcg ctgagacgtt gctatttgga gttgtgtcgt cgtattctac gaaacaccga 3181 ctatcaggaa catcagcatc gtaaacaaga ttttatgaaa atctttaccc ggatattctg 3241 tgaggaaact gaatgtagtg cctccgatca gaaactagta agagaaatag ccaatgaatt 3301 tccccagata ttcaaggctt aagcatagaa ataaatgaca acagatgtaa gtttgtttac 3361 actgaaaatg caattaaata aaacacattt tgaaacaccc acaatacata tttttaaaat 3421 aagcaatttc ttataagagt tttgttctta aggtttccca aaaaaatttt gagtaaaact 3481 tgataagttc atgacaagga ttaatttttt ttttaaattg tttttatgtg atagcaaaca 3541 tttttgtttt gtttttttga atttattttt aacgtagttg taataaattc tctctttttt 3601 agaaccaaag tatttttttt ttatttttgt tttaatcttt aatgtgttct taaagaactt 3661 ttttttagtg aactatgaaa cttaaataag attactggaa tataatgaaa cgatgaggaa 3721 gaagaaaaag ataagaatcc tgttattata tttaaggcca tattgaacat ttttttacaa 3781 agtataaaga aaaaccgaaa taatcccata taaattgaaa ctttgtaaca taatttttag 3841 ataaatcgta gtttgaaaaa gtcttcaaat tcaaattgaa taactgattc aagaaattat 3901 tattaatgag aa