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LOCUS XM_013254814 2920 bp mRNA linear INV 02-SEP-2023 aminotransferase, cytosolic (LOC106089059), mRNA. ACCESSION XM_013254814 VERSION XM_013254814.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013254814.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2920 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2920 /gene="LOC106089059" /note="branched-chain-amino-acid aminotransferase, cytosolic; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins" /db_xref="GeneID:106089059" CDS 564..1892 /gene="LOC106089059" /codon_start=1 /product="branched-chain-amino-acid aminotransferase, cytosolic" /protein_id="XP_013110268.1" /db_xref="GeneID:106089059" /translation="MTTKMAINAKELFRNQHRLIRFIEQSIRMCSNQTLKQQQQQKTQ LEADFQITKSITSQLSTAVPEPIVHDEDVGQQFAASALSVRLATPQQLQPKPDNAEEL GFGKLFTDHMLKIYWHKSLGGWQKPQITPLENLVMHPAAKVLHYAVELFEGMKAYRGV DDKIRIFRPNMNMHRMNLAAQRSGLPTFEGEEFIKCLSRLLTIDSEWVPHTEAASLYI RPTLIGIDPTLGVASSDSALLYAILSPVGSYFKSDETGAVSLLADPSYTRAWPGGAGN RKMGSNYAPTINVQKEASRKGLQQVLWLYGDDHQLTEVGTMNIFMLFINEQGEKELRT PPLNGLILPGITRDSILALTRQWGKFKVSEETFTMHNIVDLLNKGRLLELFGTGTACV VSPVNRISYLGKDLYIPTMEQEKPLHETIRETLMDIQYGKVQHPWSVVIE" misc_feature 972..1856 /gene="LOC106089059" /note="Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate. The...; Region: BCAT_beta_family; cd01557" /db_xref="CDD:238798" misc_feature order(972..983,990..1004,1008..1010,1014..1016,1107..1109, 1218..1220,1224..1226,1242..1250,1260..1262,1281..1283, 1401..1403,1416..1418,1422..1424,1434..1436,1476..1478) /gene="LOC106089059" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:238798" misc_feature order(999..1001,1014..1016,1086..1088,1254..1256, 1395..1397,1410..1412,1500..1502,1596..1601,1728..1730) /gene="LOC106089059" /note="substrate-cofactor binding pocket [active]" /db_xref="CDD:238798" misc_feature 1395..1397 /gene="LOC106089059" /note="catalytic residue [active]" /db_xref="CDD:238798" polyA_site 2920 /gene="LOC106089059" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtgaataatt cagttattgc cgcaacttgg aactgttaag acgtgtagga actattggga 61 atataaagcc aaattagtgc tcctctttat tgtcgttaag atatttttgt ttaaagaatt 121 ataacaaata aaagttaagc aaagaaagta ttcaatctcc aatacgagaa atattacaaa 181 ttcatcatct ctcaacgttt gaaaaatttc tagagtgctt tgaagttttc aaattctaga 241 ggaaattgta cacaagtgga ttaaaataca aaggaaaaag caatttaaag tattcctttt 301 tgagaaataa gagaaaatca acgagaagaa acgtgcaaaa atatcaacaa aaaaaattaa 361 aatctcttga atcttttttt tacaaaaaaa aaaaaagtat tcaagtgcct gcgtcgtctt 421 acacacacac ctcacattaa aacagaaaag ttgtttccaa gtactgaagg ttctggaagc 481 agcaaataac tcaacaaaaa gaataataca catatctagc tgctactgtt tcgagacggt 541 tttaagctaa actttcaatc aagatgacta ccaaaatggc cattaacgct aaggaactct 601 tccgcaacca acatcgtttg attcgcttca tcgaacaatc gattcgcatg tgcagcaatc 661 agacattgaa acagcaacaa caacaaaaga cacaattgga agccgatttc caaatcacca 721 aatcgatcac ttcacaattg tccactgccg tacctgaacc cattgtccac gatgaagatg 781 tcggtcaaca atttgccgcc tcagcgttgt cagttcgttt ggccacacca caacagttgc 841 aacccaaacc cgacaatgcc gaagaattgg gctttggtaa actttttacc gatcacatgt 901 tgaaaatcta ttggcacaaa agtttgggtg gttggcagaa acctcagatt acgccgttgg 961 agaatttagt tatgcatccg gcggctaaag tgttgcatta tgctgtggag cttttcgaag 1021 gcatgaaagc ttatcgcggt gtcgatgaca aaattcgcat tttccgtccc aacatgaata 1081 tgcatcgtat gaacttggct gcgcaacgtt ccggtttgcc cactttcgag ggtgaggaat 1141 tcattaagtg cctgtcacga ttgttgacca tcgattccga atgggtgcca cacacagaag 1201 ctgctagttt atatattcgt cccaccctca ttggtattga tcctaccttg ggtgttgcct 1261 cctccgattc cgccctcttg tacgccattc tcagccctgt aggcagttac ttcaagagtg 1321 atgaaaccgg cgccgtttct ctgctggctg atcccagcta caccagagcc tggcccggtg 1381 gtgctggtaa tcgtaaaatg ggttccaact atgcccccac cattaatgta caaaaagagg 1441 cttcccgcaa aggcttgcag caagtgttgt ggttgtatgg cgatgatcat caactgaccg 1501 aagttggtac catgaacatt ttcatgttgt tcatcaatga gcaaggagaa aaagaattaa 1561 gaacacctcc cttgaatggt ttaattttgc ccggcattac cagagattca atcttagcct 1621 tgacccgcca atggggtaaa ttcaaggttt ccgaagaaac ctttaccatg cacaacattg 1681 tggatcttct gaataaagga agattgctgg aattgttcgg tactggtacc gcctgcgtgg 1741 tcagccctgt caaccgcatc agctatttgg gcaaggatct gtacataccc accatggaac 1801 aagagaagcc cttacacgaa accatccgcg aaacattaat ggacatacag tatggcaaag 1861 tgcaacatcc ctggtctgtg gtcattgaat aagtcgaatg aaatcgccgg acgaaattcg 1921 ttcgtttttt tttcaaggag agaaaagatt tttcaattat gaaaatacaa aacttttttt 1981 taccacaaaa acaaaaacag cagcagcaac tttgtgtatt aatagctttt aattagctaa 2041 acacttaggc ttaagacctt agggtaaact tagttatttg gatagttttt ttttagagag 2101 gcgaaaaaca aaaaattgct gtgccaatac caaggcagcc atgaaaatga aggtgatgac 2161 aatgaatgaa attagttgta agtttaagct ccagaaaaaa tgtgacagaa aaacaaaaaa 2221 ttctcgaatt tttaaagcat ttatgaaaat aaaacaaaaa gtttaacatt ttttacacaa 2281 taattgttaa gtgtataata cctattatta attattattt aatatttaga gtcaacaaaa 2341 agaaaggcta ggcaacattt ttgtttttcg tccagcagtt acttttttta ttttcctttt 2401 ttaaaattta atttatttat ttcttttcta atttaaatgt aattctcgtt taagttagaa 2461 actgtacata tatgctattt tcctaagaac gacttcgata taccatatac atatagaaaa 2521 caaacctatg atcatctcta aagtaacaga agtagaagct atctacgcta ttaggattaa 2581 acagaacaag aatttttgcc gcatacattt gaaattttgt atacattcat accctctcca 2641 ccacccccac caacacaatg tctcttcttt tgtacatata tgagcatata tatatataca 2701 tatgacgtac atacatagat atgctattaa ataatttagt tttttatact caggggctat 2761 aatttgtatg ttgtgtatat tatatataga aaaaaaaaaa cacagaaaaa gaaaaaactc 2821 catgaaaagt gaaaagaaca aaaaagaggt tgtcttccct ttgttatttc tcttgctaac 2881 tctattcgaa aataaataat tgatggtttt gaaaacagaa