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LOCUS XM_013254742 2785 bp mRNA linear INV 02-SEP-2023 (LOC106089002), mRNA. ACCESSION XM_013254742 VERSION XM_013254742.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013254742.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2785 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2785 /gene="LOC106089002" /note="dynein axonemal assembly factor 5; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:106089002" CDS 129..2669 /gene="LOC106089002" /codon_start=1 /product="dynein axonemal assembly factor 5" /protein_id="XP_013110196.1" /db_xref="GeneID:106089002" /translation="MLFSIEDICNKLQSTERRVKIAALEELQRKCLDNQVPGKDVQEI YDELYLHLLKCYSDRFESVRDKSVETVNAFVERLPPNDFHLLNIVSALRERLGQQETV EESEEIRLVLVQQMAKLVNRFIETGNKTSLQGCTTDIIVILAKVLKDPYPAVQRQACT CVAILASSSDSYTFEKHAVPLAKALYGMLNHKHSNARIAAVNALSFVALHIDASRDSL SRLLMEVSPLLMDAMPLVRRECGELGIRLLLELKDRYSYFDRLIPLVLCCLKDESPEV RDYILPLWIKCGKKYYEENEAELSKQEIADIVPSNYPTSVKRPTIGCRAIVQRSLRLL KLITRESSDWKENVRLHSLKLLYQFVLHAEAAMTAKFFEIYPDIARCCRDNDNIVVQE AFNLADLMGRLLNYDDWCEHGFEGLEKNAKEGYLKCFYYMYTAAINVKFEDNLRLTKL LVEPDFSQTLKTDFQLYILNMVDTVLDKTEEESKLLADENPKYNAQLNELYKNCYCCT MKVRALSLESEQTNAEELQSKGSKILERIVVRYGFSLDDLHEKFFNDALEYVDNIDAP LDDLSEPILLFYGLLKLGKLREPYLLNIQQKVKTVFTMCADESKIKIFTAVSIAMLEW HNTIRRPLECSCALLRGFIDAVVEPCIVWKAGANAEAMRSLATATLCSLSQGAAEEAR YILPSLAKYIPSLLEDNSVSTRHYAVKCLNNFGAVNLEELKPIAYGCLQRLDDASSGI RILAASVIPKLEPALIDVPAGMGGEGDKKMAYEHDIWQTFVKKCLELMFLHYDGPDLR LRAVLKGTIMEMGKRYPEICKESYESILNTTCNSINLKELEEELALIK" misc_feature 141..215 /gene="LOC106089002" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" misc_feature order(189..194,201..203,210..215,321..326,333..335, 342..347,354..356,456..461,468..470,477..482,489..491, 594..599,615..617,624..629,720..725,732..734,741..746) /gene="LOC106089002" /note="putative peptide binding site [polypeptide binding]; other site" /db_xref="CDD:293787" misc_feature 270..356 /gene="LOC106089002" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" misc_feature 387..494 /gene="LOC106089002" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" misc_feature 519..629 /gene="LOC106089002" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" misc_feature 552..959 /gene="LOC106089002" /note="HEAT repeat [General function prediction only]; Region: HEAT; COG1413" /db_xref="CDD:441023" misc_feature 660..749 /gene="LOC106089002" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" misc_feature 777..869 /gene="LOC106089002" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" polyA_site 2785 /gene="LOC106089002" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 taagcgactt gttatttttt gaaaacataa aatttattta tttgaatgaa cagtatatct 61 gacaataact gctagctgtg ctgcaaggaa aaagaccttt ctacattaat ttcgatttat 121 catcgaaaat gttatttagc attgaggata tttgcaataa attgcaatca acagagcgaa 181 gagttaaaat tgccgccctg gaagaattgc aaaggaaatg tttggacaac caggtgcccg 241 gcaaagatgt tcaggaaata tacgacgaat tgtatttgca tttacttaaa tgctacagtg 301 acagattcga gagtgtacgg gataagtctg tggaaactgt gaatgcattc gtggaacgtt 361 tgccaccaaa cgactttcat ttgcttaaca tagtgtcggc tttgagagaa cgcttaggac 421 aacaagagac agtcgaggaa agtgaagaaa ttcgattggt gttagtgcag caaatggcaa 481 aattggtgaa tcgtttcata gaaactggaa ataaaacttc gctgcagggt tgcaccacag 541 atataatagt aattttagcg aaggtattga aggaccccta tccggctgtt caaagacaag 601 catgcacttg tgttgctatc ctcgcctctt cgagcgattc atatactttc gaaaaacatg 661 cagtgccact agctaaagcc ctttacggaa tgctaaacca taaacactct aacgcccgca 721 ttgcggcagt caacgctttg agttttgtgg ccctgcatat tgatgcaagt agggattctc 781 tatccagact tctaatggaa gtatctccgt tgttaatgga tgcaatgcct ctagtccgcc 841 gagaatgcgg agagttaggt atacggctgt tgcttgaact aaaggatcga tactcgtact 901 ttgatcgatt gatacctttg gtgttgtgct gcctaaaaga tgaatctccc gaagtaaggg 961 attacatact cccactttgg ataaaatgtg gcaaaaagta ttacgaggag aacgaggcgg 1021 agttaagtaa acaagaaata gctgatatag tccctagcaa ttatccaacg agtgtcaagc 1081 gccccacgat tggctgccgt gcgatagttc agcgatcgct gcgcctgctg aagcttatta 1141 cacgcgagtc atccgactgg aaggaaaatg ttcgactgca ctctctgaag ttgttatacc 1201 aatttgtttt gcatgccgag gctgccatga cagcaaaatt ttttgaaata tacccagata 1261 tagcaagatg ctgccgtgat aatgataata ttgtcgtcca ggaagcattt aatctagctg 1321 acctaatggg acgtttattg aactatgatg actggtgtga acatggattt gaaggtttag 1381 agaaaaatgc caaagaaggc tacctaaagt gtttctacta tatgtatact gcagccataa 1441 atgttaaatt tgaagataat ttgaggctga cgaaattatt ggtggaacct gatttttcac 1501 agacgctgaa aacagacttt caattgtata ttttaaatat ggttgacacg gttttagaca 1561 aaacagagga agaatcaaaa cttttggctg atgaaaaccc caaatacaat gcccaactta 1621 atgagcttta taaaaattgc tattgctgca caatgaaggt aagggccttg tcgctggaat 1681 ccgaacaaac caatgctgaa gaattgcaat caaaaggcag taaaatacta gagcgtattg 1741 ttgtacgcta tggattctct ttagacgatc ttcatgagaa atttttcaat gatgccctag 1801 agtatgtcga caatattgat gcgcctttgg acgatttaag tgaaccaatt ttattgtttt 1861 atggtctact gaaattggga aaactgcgtg agccctattt gctgaacata cagcaaaagg 1921 tcaaaacagt ttttactatg tgtgccgatg agtcgaaaat aaaaatattt acggcggtgt 1981 ccatagcaat gctggaatgg cacaatacca tacgcagacc ccttgaatgc agttgtgcat 2041 tactaagggg ttttatagat gccgtagtgg agccatgcat agtctggaaa gcaggtgcta 2101 acgcagaagc tatgcgctct ttagcaacag ctactttatg ctccctatcg cagggggcgg 2161 ctgaagaagc acgctatata ttgcctagcc tggccaaata tattcccagt ttattggagg 2221 ataattctgt atcaactcgc cactacgcag tcaaatgttt gaacaatttt ggagctgtta 2281 atctggaaga gcttaagccc atagcatatg gttgtttgca acgcctggac gatgcatcct 2341 cgggaatacg cattttagct gcttcggtca ttccaaaatt ggagccagct ctaatagatg 2401 tgccagctgg catgggcggt gaaggtgata aaaagatggc ctatgaacac gacatatggc 2461 aaacgtttgt taagaaatgc ctagagttga tgtttttaca ctacgatggg ccagatttgc 2521 ggttaagagc tgtacttaaa ggaaccatta tggaaatggg caaacgctat cccgaaatat 2581 gcaaagaaag ctatgaaagc atcctaaata ccacctgcaa tagcatcaat ttaaaggaac 2641 ttgaagagga attggctctc attaagtgaa aacttgtcaa acatccttat aaatagccgc 2701 tatttaattt caatctatga atatttttaa tatttatttt taaacaattt cattattata 2761 ataaaaacac tcaaattacc acaaa