Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

PREDICTED: Stomoxys calcitrans lectin subunit alpha-like


LOCUS       XM_013254663             618 bp    mRNA    linear   INV 02-SEP-2023
            (LOC106088949), transcript variant X1, mRNA.
ACCESSION   XM_013254663
VERSION     XM_013254663.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013254663.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..618
                     /gene="LOC106088949"
                     /note="lectin subunit alpha-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:106088949"
     CDS             24..506
                     /gene="LOC106088949"
                     /codon_start=1
                     /product="lectin subunit alpha-like isoform X1"
                     /protein_id="XP_013110117.2"
                     /db_xref="GeneID:106088949"
                     /translation="MSTKSINFVIATLWSICFIQFVAAIPQWHQARDGRSYLIEAEKK
                     FDFSTATNECYRRGLQLAEIKNADKNAAMDILLRSLFAKTPDLWIGARDDGSSRKDRP
                     FYWQKSKQRMVFGNWASGQPDNSQGVEHCVHYYSATNFKWNDIKCDSKLGFICEGRFP
                     "
     polyA_site      618
                     /gene="LOC106088949"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atcagctcaa atggttttat aaaatgagca caaagtctat aaattttgtt atcgctacgc
       61 tttggagcat ctgtttcata caatttgtcg cagctatacc ccaatggcat caggcgagag
      121 atggtcgcag ttatttaata gaagctgaga aaaagtttga cttttctact gctaccaatg
      181 agtgttatcg acgtggtctt caattggccg aaattaaaaa tgccgacaaa aatgctgcca
      241 tggatatctt gttaaggtct ttatttgcta aaactcctga tttgtggatt ggtgccagag
      301 acgatggatc ttctcgcaaa gatcgtccct tttattggca aaagtctaaa cagcgtatgg
      361 tgtttggcaa ctgggctagt ggtcaacctg ataattcaca aggtgtcgaa cattgcgttc
      421 actattatag tgccacaaat ttcaaatgga atgatatcaa atgtgattca aagttaggtt
      481 ttatttgtga aggtcgcttt ccctaataga acttaaatgt cttcacataa aatcagaatc
      541 agaattgttt gcataaaaaa tgatattcga ctttcctttt cattaaaaac aacttttatc
      601 aaaatatgca ataagaaa