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LOCUS XM_013254458 2854 bp mRNA linear INV 02-SEP-2023 (LOC106088779), transcript variant X7, mRNA. ACCESSION XM_013254458 VERSION XM_013254458.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013254458.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2854 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2854 /gene="LOC106088779" /note="chondroitin sulfate synthase 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:106088779" CDS 327..2816 /gene="LOC106088779" /codon_start=1 /product="chondroitin sulfate synthase 1" /protein_id="XP_013109912.2" /db_xref="GeneID:106088779" /translation="MMMSKNSMTKRKTLIFACFGIAIGLCIGTVLKNYRALEIVKRCN PKPNNQKTPFEIIGLGPDDTIQNSQKNLVFVGVMTAKNFIEGRAKAVYDTWGKEVPGR IAFFSSEGSFSDELPVVGLKNVDDRYPPQKKSFMMLYYMYENFIDKFEWFIRADDDVY IEPQKLENFLRSIDSSKPQFIGQAGKGNTEEFGLLSLEFDENFCMGGPGVILSSETLR RVAPHIPTCLKNLYSTHEDVEVGRCVQKFAGIPCTWNYEMQYILRHNSSGRAAFTGKL KRKEIHNAISLHPIKQAPLMYRLHSYIQGLKAEEMRQESLTLHRDIKRMAKYLEIPED SKYLVPGITLIPEEENSKRHIEDHNILGISPDLNKCVPKTREDLLEWSFIARGLYSIE HANPKHKIDSATREGLEDVITEVMENINNYSRQRGRVIEFRELLYGYTRLNALHGQDL ILDLLLIYKKYRGKKMTVPVRRHLYVQRAFTGIFIKEFEEDFYNTTLHRSFFKNILNQ GVEKLSNHFSLPGLLSSAKSPNGGGNSKIVFVLPIAGRLATFQRFLEVYESVALKEDK NCDLLVVIFGKGEEVNDHLELLKQLKGRNIYHQINYILRQEEFSRGVALDTAARSSYI HDDNIILFIDVDMIFKSETLQRIRMNTVQGKQVYLPIVFSQYDPRRQEQQYISPDEIT NESGYFRQFGFGICAIYKSDIMDESINGFDKDITGWGLEDVKFLEKIVKNGHHQNSFM VNTAEVSEDYNAKASQLRRLSVFRAPDPSLVHIYHDITCDVNLDVAQYNMCLGTKANS LGSTHLMENLFYDNFENVEFIKDFNRRKEMR" polyA_site 2854 /gene="LOC106088779" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtctttcggt ttgttgggag tgtttttctg tttttcagtc ttcgacgaat tcaactcttt 61 aggcatttat ttcaattgaa aaaaagaaaa ctataagcga aagaaatcga tgtacagatc 121 agtgtcattg ttctgataat cgcctataaa aatatccagt taatcaaagt gcaacaaaaa 181 cgaacaaatg caatattcat tggatttcgg ataaacctga ttaaaataga actcatcgtt 241 gcagcggtat caatgagtta atccaaggga ggacattgca cttttcatca ccatttatcc 301 ccagcatatt caaaattgtt ctcgtaatga tgatgagcaa aaattccatg actaagcgga 361 aaacgcttat atttgcttgt tttggcattg ccattggcct ctgcatagga acggtcctca 421 aaaattatag ggccctggaa attgtaaaac gttgtaatcc aaaaccgaac aatcagaaaa 481 cgcctttcga aattataggc ctgggtccag atgacacgat acaaaactcc caaaaaaatc 541 ttgtattcgt tggtgtgatg acggcaaaaa acttcattga aggtcgagcg aaagctgtct 601 atgatacctg gggcaaggag gtgccagggc gtattgcctt tttcagctcg gagggttcgt 661 tttcagacga attgccagtg gtcggtttga aaaatgttga cgatcgttat ccgccacaaa 721 agaagtcatt tatgatgctg tactatatgt atgaaaactt tatagacaaa ttcgaatggt 781 ttatacgggc cgatgatgac gtttacatag agccgcagaa attggaaaac tttctgagat 841 ctatagacag ctctaagccc caattcatag gtcaagctgg caaaggaaat accgaagaat 901 ttggtttgtt gtccctggag ttcgatgaga atttttgcat gggcggcccg ggtgtcattt 961 taagcagtga aactttaaga agagtcgccc ctcacatacc aacttgccta aagaatctct 1021 acagcaccca tgaagatgtc gaagtgggac gttgtgtaca gaaatttgct ggcattcctt 1081 gtacgtggaa ctatgagatg caatacattt tgaggcacaa ttccagtggc cgcgcagcat 1141 ttacaggaaa actaaagcgt aaagagatac acaatgccat ctcgttgcat cccattaaac 1201 aggctccact aatgtatcgt ctacattcct atattcaggg tttaaaagct gaagagatgc 1261 gccaagaatc attgacgctg catcgtgata tcaaacgcat ggctaaatat ttggaaatac 1321 cagaagatag caaatatttg gttccgggca tcacattaat tccagaggaa gaaaacagta 1381 aaaggcacat agaggatcac aatatattgg gtattagccc agatttgaat aaatgtgtac 1441 ctaaaacccg agaggatctt ttagagtggt ctttcattgc aagaggtcta tattccatag 1501 agcatgccaa tcccaaacac aaaatcgatt ctgccaccag agaaggccta gaagatgtca 1561 ttaccgaagt tatggaaaat attaacaact attcgcgcca gcgaggacgt gttatagaat 1621 ttcgtgagtt actgtatggc tacaccagac ttaatgctct acatggccaa gatttgatat 1681 tggatttgtt gttgatatac aaaaaatatc gaggcaagaa aatgacggtg ccagttagaa 1741 gacatttgta tgtacagcga gcgtttactg gtatatttat caaggagttc gaggaggact 1801 tctacaatac cactctacac agaagtttct ttaaaaacat tctcaatcaa ggtgtggaga 1861 aattgtccaa tcatttttct ttgcctggac tcctgtcatc ggccaaatct ccaaatggcg 1921 gaggaaattc aaaaattgtg ttcgtcttac ccatagcggg acgtttagcc actttccagc 1981 gtttcttgga ggtatatgaa agtgtagccc taaaagagga taaaaattgt gatttgcttg 2041 tggtgatttt tggcaaaggt gaagaagtaa atgatcatct ggaattgttg aagcaactga 2101 agggtcgcaa tatataccat caaataaact atatacttcg ccaggaggag ttctctcgag 2161 gagtggcttt ggatacagct gcacgatcgt cttatataca cgatgacaat attatacttt 2221 tcatagatgt ggatatgata ttcaaatcgg aaacactgca aagaattcgc atgaacactg 2281 tacaaggaaa acaggtttat ttgcctattg ttttcagtca atacgatccc cggcggcaag 2341 aacagcaata tatctcaccc gatgagataa caaatgaaag tggttacttc cgccagtttg 2401 gctttggcat atgtgccatc tataagtcgg atatcatgga cgaaagcatt aatggctttg 2461 acaaagacat aacaggctgg ggcctggaag atgtcaagtt cctggagaaa attgtcaaga 2521 atggacacca tcaaaattcc tttatggtta acacagccga agtttccgaa gattacaatg 2581 cgaaagcttc acagctgcgg cgcctctcag tattccgagc gccagatcct agtttggtac 2641 acatttatca tgacatcaca tgtgatgtca acctagatgt ggcccagtac aatatgtgcc 2701 ttggcacaaa ggcgaattca ttgggcagta cccatttaat ggagaacttg ttctacgaca 2761 atttcgaaaa tgttgaattt attaaagatt ttaaccgcag aaaagagatg agatgatggg 2821 cttagtttat cataacttta agggcgggaa ttta